RNA–Protein interactions for RNA: ENST00000437813.7

TNFRSF1A-203, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 634 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-203ENST00000437813 CT45A5P0DMU8 189 aa11.17□□□□□ -0.62
TNFRSF1A-203ENST00000437813 CT45A7P0DMV0 189 aa11.17□□□□□ -0.62
TNFRSF1A-203ENST00000437813 BLVRBP30043 206 aaPredicted RBP11.17□□□□□ -0.62
TNFRSF1A-203ENST00000437813 RAB25P57735 213 aa11.17□□□□□ -0.62
TNFRSF1A-203ENST00000437813 FAM89BQ8N5H3 189 aa11.17□□□□□ -0.62
TNFRSF1A-203ENST00000437813 TMEM59Q9BXS4 323 aa11.17□□□□□ -0.62
TNFRSF1A-203ENST00000437813 TRAV41A0A0B4J266 112 aa11.16□□□□□ -0.62
TNFRSF1A-203ENST00000437813 RGS11O94810 467 aa11.16□□□□□ -0.62
TNFRSF1A-203ENST00000437813 NHLRC4P0CG21 123 aaPredicted RBP11.16□□□□□ -0.62
TNFRSF1A-203ENST00000437813 SNRPBP14678 240 aaKnown RBP11.16□□□□□ -0.62
TNFRSF1A-203ENST00000437813 SRMP19623 302 aa11.16□□□□□ -0.62
TNFRSF1A-203ENST00000437813 RAB9AP51151 201 aa11.16□□□□□ -0.62
TNFRSF1A-203ENST00000437813 GABPB1Q06547 395 aaPredicted RBP11.16□□□□□ -0.62
TNFRSF1A-203ENST00000437813 FAM131AQ6UXB0 335 aa11.16□□□□□ -0.62
TNFRSF1A-203ENST00000437813 TMEM91Q6ZNR0 172 aa11.16□□□□□ -0.62
TNFRSF1A-203ENST00000437813 OR2AK2Q8NG84 335 aa11.16□□□□□ -0.62
TNFRSF1A-203ENST00000437813 KCNG3Q8TAE7 436 aa11.16□□□□□ -0.62
TNFRSF1A-203ENST00000437813 NEDD4LQ96PU5 975 aa11.16□□□□□ -0.62
TNFRSF1A-203ENST00000437813 LPAR5Q9H1C0 372 aa11.16□□□□□ -0.62
TNFRSF1A-203ENST00000437813 SLC23A1Q9UHI7 598 aa11.16□□□□□ -0.62
TNFRSF1A-203ENST00000437813 VSIG4Q9Y279 399 aa11.16□□□□□ -0.62
TNFRSF1A-203ENST00000437813 ERGIC3Q9Y282 383 aa11.16□□□□□ -0.62
TNFRSF1A-203ENST00000437813 NUBP2Q9Y5Y2 271 aa11.16□□□□□ -0.62
TNFRSF1A-203ENST00000437813 H0YJW9 148 aa11.15□□□□□ -0.62
TNFRSF1A-203ENST00000437813 FCN1O00602 326 aa11.15□□□□□ -0.62
TNFRSF1A-203ENST00000437813 ST8SIA5O15466 376 aa11.15□□□□□ -0.62
TNFRSF1A-203ENST00000437813 OR8U8P0C7N1 319 aa11.15□□□□□ -0.62
TNFRSF1A-203ENST00000437813 CX3CL1P78423 397 aa11.15□□□□□ -0.62
TNFRSF1A-203ENST00000437813 ZNF616Q08AN1 781 aa11.15□□□□□ -0.62
TNFRSF1A-203ENST00000437813 SPHARQ15513 63 aa11.15□□□□□ -0.62
TNFRSF1A-203ENST00000437813 RPL39P5Q59GN2 51 aa11.15□□□□□ -0.62
TNFRSF1A-203ENST00000437813 GLT8D1Q68CQ7 371 aa11.15□□□□□ -0.62
TNFRSF1A-203ENST00000437813 LIN54Q6MZP7 749 aa11.15□□□□□ -0.62
TNFRSF1A-203ENST00000437813 OR5AN1Q8NGI8 311 aa11.15□□□□□ -0.62
TNFRSF1A-203ENST00000437813 OR1N2Q8NGR9 330 aa11.15□□□□□ -0.62
TNFRSF1A-203ENST00000437813 TMED9Q9BVK6 235 aa11.15□□□□□ -0.62
TNFRSF1A-203ENST00000437813 MND1Q9BWT6 205 aa11.15□□□□□ -0.62
TNFRSF1A-203ENST00000437813 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.15□□□□□ -0.62
TNFRSF1A-203ENST00000437813 PARP11Q9NR21 331 aa11.15□□□□□ -0.62
TNFRSF1A-203ENST00000437813 RRHO14718 337 aa11.14□□□□□ -0.63
TNFRSF1A-203ENST00000437813 RAB29O14966 203 aa11.14□□□□□ -0.63
TNFRSF1A-203ENST00000437813 SOCS1O15524 211 aa11.14□□□□□ -0.63
TNFRSF1A-203ENST00000437813 BPNT1O95861 308 aa11.14□□□□□ -0.63
TNFRSF1A-203ENST00000437813 ECI1P42126 302 aa11.14□□□□□ -0.63
TNFRSF1A-203ENST00000437813 INSL3P51460 131 aa11.14□□□□□ -0.63
TNFRSF1A-203ENST00000437813 TMEM50BP56557 158 aa11.14□□□□□ -0.63
TNFRSF1A-203ENST00000437813 ZNF260Q3ZCT1 412 aa11.14□□□□□ -0.63
TNFRSF1A-203ENST00000437813 RBM48Q5RL73 367 aaKnown RBP11.14□□□□□ -0.63
TNFRSF1A-203ENST00000437813 ZNF660Q6AZW8 331 aaPredicted RBP11.14□□□□□ -0.63
TNFRSF1A-203ENST00000437813 CD200R1LQ6Q8B3 271 aa11.14□□□□□ -0.63
TNFRSF1A-203ENST00000437813 MOB1BQ7L9L4 216 aa11.14□□□□□ -0.63
TNFRSF1A-203ENST00000437813 OR6M1Q8NGM8 313 aa11.14□□□□□ -0.63
TNFRSF1A-203ENST00000437813 PTX4Q96A99 478 aa11.14□□□□□ -0.63
TNFRSF1A-203ENST00000437813 HDHD3Q9BSH5 251 aaPredicted RBP11.14□□□□□ -0.63
TNFRSF1A-203ENST00000437813 PIPOXQ9P0Z9 390 aa11.14□□□□□ -0.63
TNFRSF1A-203ENST00000437813 GAB2Q9UQC2 676 aa11.14□□□□□ -0.63
TNFRSF1A-203ENST00000437813 ZNF256Q9Y2P7 627 aaPredicted RBP11.14□□□□□ -0.63
TNFRSF1A-203ENST00000437813 U3KQK5 164 aa11.14□□□□□ -0.63
TNFRSF1A-203ENST00000437813 IGKV1-6A0A0C4DH72 117 aa11.13□□□□□ -0.63
TNFRSF1A-203ENST00000437813 OR5H14A6NHG9 310 aa11.13□□□□□ -0.63
TNFRSF1A-203ENST00000437813 SSBP2P81877 361 aaPredicted RBP11.13□□□□□ -0.63
TNFRSF1A-203ENST00000437813 TPBGQ13641 420 aa11.13□□□□□ -0.63
TNFRSF1A-203ENST00000437813 HSD17B12Q53GQ0 312 aa11.13□□□□□ -0.63
TNFRSF1A-203ENST00000437813 GLDNQ6ZMI3 551 aaPredicted RBP11.13□□□□□ -0.63
TNFRSF1A-203ENST00000437813 CEACAM19Q7Z692 300 aa11.13□□□□□ -0.63
TNFRSF1A-203ENST00000437813 IL1F10Q8WWZ1 152 aa11.13□□□□□ -0.63
TNFRSF1A-203ENST00000437813 DCUN1D4Q92564 292 aa11.13□□□□□ -0.63
TNFRSF1A-203ENST00000437813 ABHD14BQ96IU4 210 aa11.13□□□□□ -0.63
TNFRSF1A-203ENST00000437813 TOLLIPQ9H0E2 274 aa11.13□□□□□ -0.63
TNFRSF1A-203ENST00000437813 C11orf54Q9H0W9 315 aaPredicted RBP11.13□□□□□ -0.63
TNFRSF1A-203ENST00000437813 ALX4Q9H161 411 aaPredicted RBP11.13□□□□□ -0.63
TNFRSF1A-203ENST00000437813 FBXL15Q9H469 300 aa11.13□□□□□ -0.63
TNFRSF1A-203ENST00000437813 DUSP21Q9H596 190 aa11.13□□□□□ -0.63
TNFRSF1A-203ENST00000437813 ABRACLQ9P1F3 81 aa11.13□□□□□ -0.63
TNFRSF1A-203ENST00000437813 OR1A1Q9P1Q5 309 aa11.13□□□□□ -0.63
TNFRSF1A-203ENST00000437813 STEAP1Q9UHE8 339 aa11.13□□□□□ -0.63
TNFRSF1A-203ENST00000437813 AK3Q9UIJ7 227 aa11.13□□□□□ -0.63
TNFRSF1A-203ENST00000437813 HSF4Q9ULV5 492 aa11.13□□□□□ -0.63
TNFRSF1A-203ENST00000437813 SLC17A2O00624 439 aa11.12□□□□□ -0.63
TNFRSF1A-203ENST00000437813 LDLRAD4O15165 306 aa11.12□□□□□ -0.63
TNFRSF1A-203ENST00000437813 TMEM65Q6PI78 240 aa11.12□□□□□ -0.63
TNFRSF1A-203ENST00000437813 NRG4Q8WWG1 115 aa11.12□□□□□ -0.63
TNFRSF1A-203ENST00000437813 DLX4Q92988 240 aaPredicted RBP11.12□□□□□ -0.63
TNFRSF1A-203ENST00000437813 OR5B12Q96R08 314 aa11.12□□□□□ -0.63
TNFRSF1A-203ENST00000437813 RNF5Q99942 180 aa11.12□□□□□ -0.63
TNFRSF1A-203ENST00000437813 GHITMQ9H3K2 345 aa11.12□□□□□ -0.63
TNFRSF1A-203ENST00000437813 RIMS4Q9H426 269 aaPredicted RBP11.12□□□□□ -0.63
TNFRSF1A-203ENST00000437813 Q9N2K0 584 aa11.12□□□□□ -0.63
TNFRSF1A-203ENST00000437813 NKX1-2Q9UD57 310 aaPredicted RBP11.12□□□□□ -0.63
TNFRSF1A-203ENST00000437813 FOXA2Q9Y261 457 aaPredicted RBP11.12□□□□□ -0.63
TNFRSF1A-203ENST00000437813 TNCP24821 2201 aa11.12□□□□□ -0.63
TNFRSF1A-203ENST00000437813 PTGES3LE9PB15 166 aa11.11□□□□□ -0.63
TNFRSF1A-203ENST00000437813 RBBP9O75884 186 aa11.11□□□□□ -0.63
TNFRSF1A-203ENST00000437813 IGKV1-16P04430 117 aa11.11□□□□□ -0.63
TNFRSF1A-203ENST00000437813 SCTP09683 121 aa11.11□□□□□ -0.63
TNFRSF1A-203ENST00000437813 MC5RP33032 325 aa11.11□□□□□ -0.63
TNFRSF1A-203ENST00000437813 LINC00205P59089 165 aa11.11□□□□□ -0.63
TNFRSF1A-203ENST00000437813 HLA-DRB3P79483 266 aa11.11□□□□□ -0.63
TNFRSF1A-203ENST00000437813 PLAC9Q5JTB6 97 aa11.11□□□□□ -0.63
TNFRSF1A-203ENST00000437813 LIPKQ5VXJ0 399 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms