RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 A0A1B0GV72 72 aa3.25□□□□□ -1.89
LSM5-205ENST00000409952 C4orf51C9J302 202 aa3.25□□□□□ -1.89
LSM5-205ENST00000409952 CRYGDP07320 174 aa3.25□□□□□ -1.89
LSM5-205ENST00000409952 CCL1P22362 96 aa3.25□□□□□ -1.89
LSM5-205ENST00000409952 HIST1H1TP22492 207 aaPredicted RBP3.25□□□□□ -1.89
LSM5-205ENST00000409952 S100A2P29034 98 aa3.25□□□□□ -1.89
LSM5-205ENST00000409952 MMDQ15546 238 aa3.25□□□□□ -1.89
LSM5-205ENST00000409952 IAH1Q2TAA2 248 aaPredicted RBP3.25□□□□□ -1.89
LSM5-205ENST00000409952 ARHGAP11BQ3KRB8 267 aa3.25□□□□□ -1.89
LSM5-205ENST00000409952 TEX36Q5VZQ5 186 aa3.25□□□□□ -1.89
LSM5-205ENST00000409952 FAM104BQ5XKR9 115 aa3.25□□□□□ -1.89
LSM5-205ENST00000409952 LPCAT3Q6P1A2 487 aa3.25□□□□□ -1.89
LSM5-205ENST00000409952 C20orf196Q8IYI0 205 aa3.25□□□□□ -1.89
LSM5-205ENST00000409952 LY6G5BQ8NDX9 201 aa3.25□□□□□ -1.89
LSM5-205ENST00000409952 GPR82Q96P67 336 aa3.25□□□□□ -1.89
LSM5-205ENST00000409952 TRIB3Q96RU7 358 aa3.25□□□□□ -1.89
LSM5-205ENST00000409952 ANGPT4Q9Y264 503 aa3.25□□□□□ -1.89
LSM5-205ENST00000409952 PIKFYVEQ9Y2I7 2098 aa3.24□□□□□ -1.89
LSM5-205ENST00000409952 CAMSAP1Q5T5Y3 1602 aa3.24□□□□□ -1.89
LSM5-205ENST00000409952 FAAHO00519 579 aa3.24□□□□□ -1.89
LSM5-205ENST00000409952 MT-CO2P00403 227 aa3.24□□□□□ -1.89
LSM5-205ENST00000409952 IFNA1P01562 189 aa3.24□□□□□ -1.89
LSM5-205ENST00000409952 IGHG2P01859 326 aa3.24□□□□□ -1.89
LSM5-205ENST00000409952 FGF6P10767 208 aa3.24□□□□□ -1.89
LSM5-205ENST00000409952 CYBAP13498 195 aa3.24□□□□□ -1.89
LSM5-205ENST00000409952 LINC00313P59037 77 aa3.24□□□□□ -1.89
LSM5-205ENST00000409952 BTN3A2P78410 334 aa3.24□□□□□ -1.89
LSM5-205ENST00000409952 TNFRSF9Q07011 255 aa3.24□□□□□ -1.89
LSM5-205ENST00000409952 SP6Q3SY56 376 aa3.24□□□□□ -1.89
LSM5-205ENST00000409952 KLHL12Q53G59 568 aa3.24□□□□□ -1.89
LSM5-205ENST00000409952 C3orf33Q6P1S2 294 aa3.24□□□□□ -1.89
LSM5-205ENST00000409952 C5orf46Q6UWT4 87 aa3.24□□□□□ -1.89
LSM5-205ENST00000409952 SLC35F6Q8N357 371 aa3.24□□□□□ -1.89
LSM5-205ENST00000409952 OR2T4Q8NH00 348 aa3.24□□□□□ -1.89
LSM5-205ENST00000409952 LHFPL5Q8TAF8 219 aa3.24□□□□□ -1.89
LSM5-205ENST00000409952 RASSF5Q8WWW0 418 aa3.24□□□□□ -1.89
LSM5-205ENST00000409952 PHYHIPLQ96FC7 376 aa3.24□□□□□ -1.89
LSM5-205ENST00000409952 LINC00477Q96M19 166 aa3.24□□□□□ -1.89
LSM5-205ENST00000409952 NDFIP1Q9BT67 221 aa3.24□□□□□ -1.89
LSM5-205ENST00000409952 DDA1Q9BW61 102 aa3.24□□□□□ -1.89
LSM5-205ENST00000409952 ALX4Q9H161 411 aaPredicted RBP3.24□□□□□ -1.89
LSM5-205ENST00000409952 FAM96AQ9H5X1 160 aa3.24□□□□□ -1.89
LSM5-205ENST00000409952 ZNF430Q9H8G1 570 aaPredicted RBP3.24□□□□□ -1.89
LSM5-205ENST00000409952 RWDD2AQ9UIY3 292 aa3.24□□□□□ -1.89
LSM5-205ENST00000409952 DNAJC12Q9UKB3 198 aa3.24□□□□□ -1.89
LSM5-205ENST00000409952 PXMP4Q9Y6I8 212 aa3.24□□□□□ -1.89
LSM5-205ENST00000409952 SMARCA2P51531 1590 aa3.24□□□□□ -1.89
LSM5-205ENST00000409952 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.23□□□□□ -1.89
LSM5-205ENST00000409952 TMED7-TICAM2A0A0A6YYA0 188 aa3.23□□□□□ -1.89
LSM5-205ENST00000409952 IGHV3-43A0A0B4J1X8 118 aa3.23□□□□□ -1.89
LSM5-205ENST00000409952 IZUMO1RA6ND01 250 aa3.23□□□□□ -1.89
LSM5-205ENST00000409952 INMT-MINDY4F8WBC2 141 aa3.23□□□□□ -1.89
LSM5-205ENST00000409952 PTPRTO14522 1441 aa3.23□□□□□ -1.89
LSM5-205ENST00000409952 NACADO15069 1562 aa3.23□□□□□ -1.89
LSM5-205ENST00000409952 RBFOX2O43251 390 aaKnown RBP eCLIP3.23□□□□□ -1.89
LSM5-205ENST00000409952 PDE6DO43924 150 aa3.23□□□□□ -1.89
LSM5-205ENST00000409952 OR7C2O60412 319 aa3.23□□□□□ -1.89
LSM5-205ENST00000409952 IGLV3-27P01718 113 aa3.23□□□□□ -1.89
LSM5-205ENST00000409952 CD28P10747 220 aa3.23□□□□□ -1.89
LSM5-205ENST00000409952 CDK2P24941 298 aa3.23□□□□□ -1.89
LSM5-205ENST00000409952 GABRA3P34903 492 aa3.23□□□□□ -1.89
LSM5-205ENST00000409952 RPL5P46777 297 aaKnown RBP3.23□□□□□ -1.89
LSM5-205ENST00000409952 TAS2R41P59536 307 aa3.23□□□□□ -1.89
LSM5-205ENST00000409952 TFAMQ00059 246 aaKnown RBP3.23□□□□□ -1.89
LSM5-205ENST00000409952 RUNX1Q01196 453 aa3.23□□□□□ -1.89
LSM5-205ENST00000409952 DEFB116Q30KQ4 102 aa3.23□□□□□ -1.89
LSM5-205ENST00000409952 TNS2Q63HR2 1409 aa3.23□□□□□ -1.89
LSM5-205ENST00000409952 TMEM144Q7Z5S9 345 aa3.23□□□□□ -1.89
LSM5-205ENST00000409952 ZNF101Q8IZC7 436 aa3.23□□□□□ -1.89
LSM5-205ENST00000409952 KRTCAP2Q8N6L1 136 aa3.23□□□□□ -1.89
LSM5-205ENST00000409952 OR51A2Q8NGJ7 313 aa3.23□□□□□ -1.89
LSM5-205ENST00000409952 OR9A2Q8NGT5 310 aa3.23□□□□□ -1.89
LSM5-205ENST00000409952 OR2T27Q8NH04 317 aa3.23□□□□□ -1.89
LSM5-205ENST00000409952 KCTD4Q8WVF5 259 aa3.23□□□□□ -1.89
LSM5-205ENST00000409952 ITLN2Q8WWU7 325 aaPredicted RBP3.23□□□□□ -1.89
LSM5-205ENST00000409952 MAL2Q969L2 176 aa3.23□□□□□ -1.89
LSM5-205ENST00000409952 MS4A6EQ96DS6 147 aa3.23□□□□□ -1.89
LSM5-205ENST00000409952 RBMXL1Q96E39 390 aaKnown RBP3.23□□□□□ -1.89
LSM5-205ENST00000409952 ZHX1-C8orf76Q96EF9 292 aa3.23□□□□□ -1.89
LSM5-205ENST00000409952 CPNE2Q96FN4 548 aaPredicted RBP3.23□□□□□ -1.89
LSM5-205ENST00000409952 PEBP4Q96S96 227 aa3.23□□□□□ -1.89
LSM5-205ENST00000409952 BATF3Q9NR55 127 aa3.23□□□□□ -1.89
LSM5-205ENST00000409952 INIPQ9NRY2 104 aa3.23□□□□□ -1.89
LSM5-205ENST00000409952 ARAP3Q8WWN8 1544 aa3.23□□□□□ -1.89
LSM5-205ENST00000409952 PIK3C2GO75747 1445 aa3.22□□□□□ -1.89
LSM5-205ENST00000409952 WRNQ14191 1432 aaPredicted RBP eCLIP3.22□□□□□ -1.89
LSM5-205ENST00000409952 OR4C45A6NMZ5 311 aa3.22□□□□□ -1.89
LSM5-205ENST00000409952 TMX2-CTNND1H3BSU7 103 aa3.22□□□□□ -1.89
LSM5-205ENST00000409952 M0R381 172 aa3.22□□□□□ -1.89
LSM5-205ENST00000409952 FSTL3O95633 263 aa3.22□□□□□ -1.89
LSM5-205ENST00000409952 IFNA21P01568 189 aa3.22□□□□□ -1.89
LSM5-205ENST00000409952 IFNA14P01570 189 aa3.22□□□□□ -1.89
LSM5-205ENST00000409952 IGHMP01871 453 aa3.22□□□□□ -1.89
LSM5-205ENST00000409952 OR5AC1P0C628 307 aa3.22□□□□□ -1.89
LSM5-205ENST00000409952 ELK1P19419 428 aa3.22□□□□□ -1.89
LSM5-205ENST00000409952 CA7P43166 264 aa3.22□□□□□ -1.89
LSM5-205ENST00000409952 ZNF79Q15937 498 aa3.22□□□□□ -1.89
LSM5-205ENST00000409952 PLPPR5Q32ZL2 321 aa3.22□□□□□ -1.89
LSM5-205ENST00000409952 TIFABQ6ZNK6 161 aa3.22□□□□□ -1.89
LSM5-205ENST00000409952 OOSP2Q86WS3 158 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms