RNA–Protein interactions for RNA: ENST00000400908.6

RERE-204, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 5,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-204ENST00000400908 NPVFQ9HCQ7 196 aa12.11□□□□□ -0.47
RERE-204ENST00000400908 PXMP4Q9Y6I8 212 aa12.11□□□□□ -0.47
RERE-204ENST00000400908 TRAV8-6A0A0B4J262 113 aa12.11□□□□□ -0.47
RERE-204ENST00000400908 F12P00748 615 aaPredicted RBP12.11□□□□□ -0.47
RERE-204ENST00000400908 OR4A5Q8NH83 315 aa12.11□□□□□ -0.47
RERE-204ENST00000400908 FAM216AQ8WUB2 273 aa12.11□□□□□ -0.47
RERE-204ENST00000400908 CNRIP1Q96F85 164 aaPredicted RBP12.11□□□□□ -0.47
RERE-204ENST00000400908 ABHD1Q96SE0 405 aa12.11□□□□□ -0.47
RERE-204ENST00000400908 PRSS27Q9BQR3 290 aa12.11□□□□□ -0.47
RERE-204ENST00000400908 CXorf51AA0A1B0GTR3 108 aa12.11□□□□□ -0.47
RERE-204ENST00000400908 CCL2P13500 99 aa12.11□□□□□ -0.47
RERE-204ENST00000400908 RAC3P60763 192 aa12.11□□□□□ -0.47
RERE-204ENST00000400908 TMEM170BQ5T4T1 132 aa12.11□□□□□ -0.47
RERE-204ENST00000400908 NEU1Q99519 415 aa12.11□□□□□ -0.47
RERE-204ENST00000400908 SIPA1L1O43166 1804 aa12.11□□□□□ -0.47
RERE-204ENST00000400908 NPFFO15130 113 aa12.11□□□□□ -0.47
RERE-204ENST00000400908 WDR34Q96EX3 536 aa12.11□□□□□ -0.47
RERE-204ENST00000400908 TMEM262E9PQX1 116 aa12.11□□□□□ -0.47
RERE-204ENST00000400908 CTAG1AP78358 180 aa12.11□□□□□ -0.47
RERE-204ENST00000400908 NAAAQ02083 359 aa12.11□□□□□ -0.47
RERE-204ENST00000400908 ZNF56Q15929 161 aa12.11□□□□□ -0.47
RERE-204ENST00000400908 ATOH7Q8N100 152 aa12.11□□□□□ -0.47
RERE-204ENST00000400908 TMEM160Q9NX00 188 aa12.11□□□□□ -0.47
RERE-204ENST00000400908 METTL1Q9UBP6 276 aaKnown RBP12.11□□□□□ -0.47
RERE-204ENST00000400908 FFAR1O14842 300 aa12.1□□□□□ -0.47
RERE-204ENST00000400908 LDLRAD4O15165 306 aa12.1□□□□□ -0.47
RERE-204ENST00000400908 GDF9O60383 454 aa12.1□□□□□ -0.47
RERE-204ENST00000400908 RAE1P78406 368 aaKnown RBP12.1□□□□□ -0.47
RERE-204ENST00000400908 KRTCAP3Q53RY4 240 aa12.1□□□□□ -0.47
RERE-204ENST00000400908 TMEM177Q53S58 311 aa12.1□□□□□ -0.47
RERE-204ENST00000400908 OR6X1Q8NH79 312 aa12.1□□□□□ -0.47
RERE-204ENST00000400908 AICDAQ9GZX7 198 aa12.1□□□□□ -0.47
RERE-204ENST00000400908 CXCL3P19876 107 aa12.1□□□□□ -0.47
RERE-204ENST00000400908 PSG6Q00889 435 aa12.1□□□□□ -0.47
RERE-204ENST00000400908 FAM209AQ5JX71 171 aa12.1□□□□□ -0.47
RERE-204ENST00000400908 ARID1BQ8NFD5 2236 aaPredicted RBP12.1□□□□□ -0.47
RERE-204ENST00000400908 CDX4O14627 284 aaPredicted RBP12.1□□□□□ -0.47
RERE-204ENST00000400908 ETHE1O95571 254 aa12.1□□□□□ -0.47
RERE-204ENST00000400908 TMEM196Q5HYL7 178 aa12.1□□□□□ -0.47
RERE-204ENST00000400908 CCL4L1Q8NHW4 92 aa12.1□□□□□ -0.47
RERE-204ENST00000400908 RNF7Q9UBF6 113 aa12.1□□□□□ -0.47
RERE-204ENST00000400908 TRBV23-1A0A0A0MS06 115 aa12.1□□□□□ -0.47
RERE-204ENST00000400908 A0A1B0GTH9 108 aa12.1□□□□□ -0.47
RERE-204ENST00000400908 PSMB11A5LHX3 300 aa12.1□□□□□ -0.47
RERE-204ENST00000400908 TMEM250H0YL14 139 aa12.1□□□□□ -0.47
RERE-204ENST00000400908 HSPB1P04792 205 aaKnown RBP12.1□□□□□ -0.47
RERE-204ENST00000400908 PSG2P11465 335 aa12.1□□□□□ -0.47
RERE-204ENST00000400908 NXPH1P58417 271 aa12.1□□□□□ -0.47
RERE-204ENST00000400908 PTP4A1Q93096 173 aa12.1□□□□□ -0.47
RERE-204ENST00000400908 PLA2G3Q9NZ20 509 aa12.1□□□□□ -0.47
RERE-204ENST00000400908 MUC1P15941 1255 aaPredicted RBP12.09□□□□□ -0.47
RERE-204ENST00000400908 SAPCD1Q5SSQ6 148 aa12.09□□□□□ -0.47
RERE-204ENST00000400908 C1orf53Q5VUE5 145 aa12.09□□□□□ -0.47
RERE-204ENST00000400908 ZNF414Q96IQ9 312 aa12.09□□□□□ -0.47
RERE-204ENST00000400908 A0A0A6YYD5 115 aa12.09□□□□□ -0.47
RERE-204ENST00000400908 SLC25A20O43772 301 aa12.09□□□□□ -0.47
RERE-204ENST00000400908 MBNL2Q5VZF2 373 aaKnown RBP12.09□□□□□ -0.47
RERE-204ENST00000400908 EAF1Q96JC9 268 aaPredicted RBP12.09□□□□□ -0.47
RERE-204ENST00000400908 LINC00615Q96LM1 132 aaPredicted RBP12.09□□□□□ -0.47
RERE-204ENST00000400908 PHF7Q9BWX1 381 aaPredicted RBP12.09□□□□□ -0.47
RERE-204ENST00000400908 S1PR2O95136 353 aa12.09□□□□□ -0.47
RERE-204ENST00000400908 XAF1Q6GPH4 301 aa12.09□□□□□ -0.47
RERE-204ENST00000400908 OVCH2Q7RTZ1 564 aa12.09□□□□□ -0.47
RERE-204ENST00000400908 OR8B12Q8NGG6 310 aa12.09□□□□□ -0.47
RERE-204ENST00000400908 PHLDA1Q8WV24 401 aaPredicted RBP12.09□□□□□ -0.47
RERE-204ENST00000400908 C10orf35Q96D05 121 aa12.09□□□□□ -0.47
RERE-204ENST00000400908 TRBV9A0A0B4J1U6 114 aa12.09□□□□□ -0.47
RERE-204ENST00000400908 CEACAM18A8MTB9 384 aa12.09□□□□□ -0.47
RERE-204ENST00000400908 SOCS1O15524 211 aa12.09□□□□□ -0.47
RERE-204ENST00000400908 ZDHHC8Q9ULC8 765 aa12.09□□□□□ -0.47
RERE-204ENST00000400908 RBBP6Q7Z6E9 1792 aaKnown RBP12.09□□□□□ -0.47
RERE-204ENST00000400908 PGPA6NDG6 321 aa12.09□□□□□ -0.47
RERE-204ENST00000400908 CGB1A6NKQ9 187 aa12.09□□□□□ -0.47
RERE-204ENST00000400908 TSPAN2O60636 221 aa12.09□□□□□ -0.47
RERE-204ENST00000400908 OR2K2Q8NGT1 345 aa12.09□□□□□ -0.47
RERE-204ENST00000400908 TRIP12Q14669 1992 aaPredicted RBP12.08□□□□□ -0.48
RERE-204ENST00000400908 GFERP55789 205 aa12.08□□□□□ -0.48
RERE-204ENST00000400908 SELENOTP62341 195 aa12.08□□□□□ -0.48
RERE-204ENST00000400908 PSG9Q00887 426 aa12.08□□□□□ -0.48
RERE-204ENST00000400908 BIVMQ86UB2 503 aa12.08□□□□□ -0.48
RERE-204ENST00000400908 OR11H7Q8NGC8 314 aa12.08□□□□□ -0.48
RERE-204ENST00000400908 PTPMT1Q8WUK0 201 aaPredicted RBP12.08□□□□□ -0.48
RERE-204ENST00000400908 TNS1Q9HBL0 1735 aaKnown RBP12.08□□□□□ -0.48
RERE-204ENST00000400908 GALNSP34059 522 aa12.08□□□□□ -0.48
RERE-204ENST00000400908 SRSF5Q13243 272 aaKnown RBP12.08□□□□□ -0.48
RERE-204ENST00000400908 C17orf47Q8NEP4 570 aa12.08□□□□□ -0.48
RERE-204ENST00000400908 SLC6A13Q9NSD5 602 aa12.08□□□□□ -0.48
RERE-204ENST00000400908 IL36RNQ9UBH0 155 aa12.08□□□□□ -0.48
RERE-204ENST00000400908 TGFAP01135 160 aa12.08□□□□□ -0.48
RERE-204ENST00000400908 RCC1P18754 421 aaPredicted RBP12.08□□□□□ -0.48
RERE-204ENST00000400908 TMEM249Q2WGJ8 235 aa12.08□□□□□ -0.48
RERE-204ENST00000400908 CEACAM5P06731 702 aa12.08□□□□□ -0.48
RERE-204ENST00000400908 MEF2BQ02080 365 aaPredicted RBP12.08□□□□□ -0.48
RERE-204ENST00000400908 PQLC2Q6ZP29 291 aa12.08□□□□□ -0.48
RERE-204ENST00000400908 SRSF12Q8WXF0 261 aaKnown RBP12.08□□□□□ -0.48
RERE-204ENST00000400908 MRGPRX3Q96LB0 322 aa12.08□□□□□ -0.48
RERE-204ENST00000400908 TMEFF2Q9UIK5 374 aaPredicted RBP12.08□□□□□ -0.48
RERE-204ENST00000400908 H3BRM9 83 aa12.07□□□□□ -0.48
RERE-204ENST00000400908 FXYD1O00168 92 aa12.07□□□□□ -0.48
RERE-204ENST00000400908 CA11O75493 328 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms