RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 TRAV20A0A0B4J274 112 aa21.55■■□□□ 1.04
COL13A1-203ENST00000398969 CDIPTO14735 213 aa21.55■■□□□ 1.04
COL13A1-203ENST00000398969 SMPD2O60906 423 aa21.55■■□□□ 1.04
COL13A1-203ENST00000398969 NXPH2O95156 264 aa21.55■■□□□ 1.04
COL13A1-203ENST00000398969 TCF15Q12870 199 aa21.55■■□□□ 1.04
COL13A1-203ENST00000398969 SLC10A1Q14973 349 aa21.55■■□□□ 1.04
COL13A1-203ENST00000398969 MDS2Q8NDY4 140 aa21.55■■□□□ 1.04
COL13A1-203ENST00000398969 OR2J1Q9GZK6 312 aa21.55■■□□□ 1.04
COL13A1-203ENST00000398969 FAM90A26D6RGX4 464 aa21.54■■□□□ 1.04
COL13A1-203ENST00000398969 CYB5R3P00387 301 aaPredicted RBP21.54■■□□□ 1.04
COL13A1-203ENST00000398969 RND2P52198 227 aa21.54■■□□□ 1.04
COL13A1-203ENST00000398969 MRGPRGQ86SM5 289 aa21.54■■□□□ 1.04
COL13A1-203ENST00000398969 PINX1Q96BK5 328 aaKnown RBP21.54■■□□□ 1.04
COL13A1-203ENST00000398969 SDF2L1Q9HCN8 221 aa21.54■■□□□ 1.04
COL13A1-203ENST00000398969 VAX2Q9UIW0 290 aa21.54■■□□□ 1.04
COL13A1-203ENST00000398969 MAP1LC3B2A6NCE7 125 aa21.54■■□□□ 1.04
COL13A1-203ENST00000398969 KLRC4-KLRK1H3BQV0 150 aa21.54■■□□□ 1.04
COL13A1-203ENST00000398969 J3QW42 95 aa21.54■■□□□ 1.04
COL13A1-203ENST00000398969 SH2D1BO14796 132 aa21.54■■□□□ 1.04
COL13A1-203ENST00000398969 ELLP55199 621 aaPredicted RBP21.54■■□□□ 1.04
COL13A1-203ENST00000398969 PPP1CBP62140 327 aa21.54■■□□□ 1.04
COL13A1-203ENST00000398969 SLC38A11Q08AI6 406 aa21.54■■□□□ 1.04
COL13A1-203ENST00000398969 TAF15Q92804 592 aaKnown RBP eCLIP21.54■■□□□ 1.04
COL13A1-203ENST00000398969 FAM210BQ96KR6 192 aa21.54■■□□□ 1.04
COL13A1-203ENST00000398969 MAP1LC3BQ9GZQ8 125 aa21.54■■□□□ 1.04
COL13A1-203ENST00000398969 DEFB127Q9H1M4 99 aa21.54■■□□□ 1.04
COL13A1-203ENST00000398969 IGHV3-64DA0A0J9YX35 117 aa21.53■■□□□ 1.04
COL13A1-203ENST00000398969 UBE2L5PA0A1B0GUS4 154 aa21.53■■□□□ 1.04
COL13A1-203ENST00000398969 RNF212BA8MTL3 300 aa21.53■■□□□ 1.04
COL13A1-203ENST00000398969 CLDN34H7C241 214 aa21.53■■□□□ 1.04
COL13A1-203ENST00000398969 S100A2P29034 98 aa21.53■■□□□ 1.04
COL13A1-203ENST00000398969 ERVS71-1P61550 626 aa21.53■■□□□ 1.04
COL13A1-203ENST00000398969 C1orf87Q8N0U7 546 aa21.53■■□□□ 1.04
COL13A1-203ENST00000398969 WDYHV1Q96HA8 205 aa21.53■■□□□ 1.04
COL13A1-203ENST00000398969 GAR1Q9NY12 217 aaKnown RBP21.53■■□□□ 1.04
COL13A1-203ENST00000398969 CEBPZOSA8MTT3 80 aa21.53■■□□□ 1.04
COL13A1-203ENST00000398969 ALKBH6Q3KRA9 238 aa21.53■■□□□ 1.04
COL13A1-203ENST00000398969 PYY3Q5JQD4 70 aa21.53■■□□□ 1.04
COL13A1-203ENST00000398969 TMEM14EPQ6UXP3 125 aa21.53■■□□□ 1.04
COL13A1-203ENST00000398969 RBKSQ9H477 322 aa21.53■■□□□ 1.04
COL13A1-203ENST00000398969 CD82P27701 267 aa21.52■■□□□ 1.04
COL13A1-203ENST00000398969 FAM209BQ5JX69 171 aa21.52■■□□□ 1.04
COL13A1-203ENST00000398969 FAM180AQ6UWF9 173 aa21.52■■□□□ 1.04
COL13A1-203ENST00000398969 PNPLA5Q7Z6Z6 429 aaPredicted RBP21.52■■□□□ 1.04
COL13A1-203ENST00000398969 TNFRSF9Q07011 255 aa21.52■■□□□ 1.03
COL13A1-203ENST00000398969 ATP1A1-AS1Q5TC04 95 aa21.52■■□□□ 1.03
COL13A1-203ENST00000398969 SEC14L6B5MCN3 397 aa21.51■■□□□ 1.03
COL13A1-203ENST00000398969 CLDN1O95832 211 aa21.51■■□□□ 1.03
COL13A1-203ENST00000398969 IFNA1P01562 189 aa21.51■■□□□ 1.03
COL13A1-203ENST00000398969 OR8G2PQ6IF36 304 aa21.51■■□□□ 1.03
COL13A1-203ENST00000398969 SPRR3Q9UBC9 169 aa21.51■■□□□ 1.03
COL13A1-203ENST00000398969 RAMP3O60896 148 aa21.5■■□□□ 1.03
COL13A1-203ENST00000398969 CEBPDP49716 269 aaPredicted RBP21.5■■□□□ 1.03
COL13A1-203ENST00000398969 ZNF645Q8N7E2 425 aa21.5■■□□□ 1.03
COL13A1-203ENST00000398969 TIMM9Q9Y5J7 89 aa21.5■■□□□ 1.03
COL13A1-203ENST00000398969 CELSR3Q9NYQ7 3312 aa21.5■■□□□ 1.03
COL13A1-203ENST00000398969 HAND1O96004 215 aa21.5■■□□□ 1.03
COL13A1-203ENST00000398969 IGKV1D-33P01593 117 aa21.5■■□□□ 1.03
COL13A1-203ENST00000398969 IGKV1-33P01594 117 aa21.5■■□□□ 1.03
COL13A1-203ENST00000398969 NKX6-1P78426 367 aaPredicted RBP21.5■■□□□ 1.03
COL13A1-203ENST00000398969 MRPL49Q13405 166 aaKnown RBP21.5■■□□□ 1.03
COL13A1-203ENST00000398969 BEND4Q6ZU67 534 aa21.5■■□□□ 1.03
COL13A1-203ENST00000398969 OR1L1Q8NH94 360 aa21.5■■□□□ 1.03
COL13A1-203ENST00000398969 CDH20Q9HBT6 801 aa21.5■■□□□ 1.03
COL13A1-203ENST00000398969 HSPB7Q9UBY9 170 aa21.5■■□□□ 1.03
COL13A1-203ENST00000398969 CHD3Q12873 2000 aaKnown RBP21.49■■□□□ 1.03
COL13A1-203ENST00000398969 PSPNO60542 156 aa21.49■■□□□ 1.03
COL13A1-203ENST00000398969 GRPP07492 148 aa21.49■■□□□ 1.03
COL13A1-203ENST00000398969 SELEP16581 610 aa21.49■■□□□ 1.03
COL13A1-203ENST00000398969 IDH3GP51553 393 aaPredicted RBP21.49■■□□□ 1.03
COL13A1-203ENST00000398969 PMS2P11Q13670 270 aa21.49■■□□□ 1.03
COL13A1-203ENST00000398969 WDR25Q64LD2 544 aaPredicted RBP21.49■■□□□ 1.03
COL13A1-203ENST00000398969 RPP25LQ8N5L8 163 aaKnown RBP21.49■■□□□ 1.03
COL13A1-203ENST00000398969 PRSS33Q8NF86 280 aa21.49■■□□□ 1.03
COL13A1-203ENST00000398969 SLC25A40Q8TBP6 338 aa21.49■■□□□ 1.03
COL13A1-203ENST00000398969 ABHD5Q8WTS1 349 aa21.49■■□□□ 1.03
COL13A1-203ENST00000398969 SSX3Q99909 188 aa21.49■■□□□ 1.03
COL13A1-203ENST00000398969 KCNIP1Q9NZI2 227 aa21.49■■□□□ 1.03
COL13A1-203ENST00000398969 DMRT1Q9Y5R6 373 aa21.49■■□□□ 1.03
COL13A1-203ENST00000398969 ZNF737O75373 536 aa21.49■■□□□ 1.03
COL13A1-203ENST00000398969 ZNF766Q5HY98 468 aa21.49■■□□□ 1.03
COL13A1-203ENST00000398969 FRZBQ92765 325 aa21.49■■□□□ 1.03
COL13A1-203ENST00000398969 LHX4Q969G2 390 aa21.49■■□□□ 1.03
COL13A1-203ENST00000398969 C5orf30Q96GV9 206 aa21.49■■□□□ 1.03
COL13A1-203ENST00000398969 OR2D2Q9H210 308 aa21.49■■□□□ 1.03
COL13A1-203ENST00000398969 SOD3P08294 240 aa21.48■■□□□ 1.03
COL13A1-203ENST00000398969 P0C879 139 aa21.48■■□□□ 1.03
COL13A1-203ENST00000398969 TRGC1P0CF51 173 aa21.48■■□□□ 1.03
COL13A1-203ENST00000398969 OR3A1P47881 315 aa21.48■■□□□ 1.03
COL13A1-203ENST00000398969 GFI1BQ5VTD9 330 aa21.48■■□□□ 1.03
COL13A1-203ENST00000398969 CENPVQ7Z7K6 275 aaPredicted RBP21.48■■□□□ 1.03
COL13A1-203ENST00000398969 ZBTB34Q8NCN2 500 aa21.48■■□□□ 1.03
COL13A1-203ENST00000398969 SLC39A9Q9NUM3 307 aa21.48■■□□□ 1.03
COL13A1-203ENST00000398969 TMEM30CPA0ZSE6 113 aa21.48■■□□□ 1.03
COL13A1-203ENST00000398969 PPP1R2P9O14990 202 aa21.48■■□□□ 1.03
COL13A1-203ENST00000398969 RAC2P15153 192 aa21.48■■□□□ 1.03
COL13A1-203ENST00000398969 G6PCP35575 357 aa21.48■■□□□ 1.03
COL13A1-203ENST00000398969 RPL30P62888 115 aaKnown RBP21.48■■□□□ 1.03
COL13A1-203ENST00000398969 GABRA6Q16445 453 aa21.48■■□□□ 1.03
COL13A1-203ENST00000398969 OR2B11Q5JQS5 317 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 160.5 ms