RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 FGFBP3Q8TAT2 258 aa13.11□□□□□ -0.31
LSS-202ENST00000397728 V9GYH0 126 aa13.11□□□□□ -0.31
LSS-202ENST00000397728 NUPL2O15504 423 aaKnown RBP13.11□□□□□ -0.31
LSS-202ENST00000397728 SSTR5P35346 364 aa13.11□□□□□ -0.31
LSS-202ENST00000397728 GAS1P54826 345 aa13.11□□□□□ -0.31
LSS-202ENST00000397728 Q96M66 194 aa13.11□□□□□ -0.31
LSS-202ENST00000397728 RAB19A4D1S5 217 aa13.11□□□□□ -0.31
LSS-202ENST00000397728 ZNF729A6NN14 1252 aaPredicted RBP13.11□□□□□ -0.31
LSS-202ENST00000397728 HOXD11P31277 338 aaPredicted RBP13.11□□□□□ -0.31
LSS-202ENST00000397728 ACP7Q6ZNF0 438 aa13.11□□□□□ -0.31
LSS-202ENST00000397728 LYZL2Q7Z4W2 148 aa13.11□□□□□ -0.31
LSS-202ENST00000397728 BPIFCQ8NFQ6 507 aa13.11□□□□□ -0.31
LSS-202ENST00000397728 OR5R1Q8NH85 324 aa13.11□□□□□ -0.31
LSS-202ENST00000397728 ZNF107Q9UII5 783 aaPredicted RBP13.11□□□□□ -0.31
LSS-202ENST00000397728 SLC35B1P78383 322 aa13.1□□□□□ -0.31
LSS-202ENST00000397728 TIGITQ495A1 244 aa13.1□□□□□ -0.31
LSS-202ENST00000397728 NCR3LG1Q68D85 454 aa13.1□□□□□ -0.31
LSS-202ENST00000397728 RELL2Q8NC24 303 aaPredicted RBP13.1□□□□□ -0.31
LSS-202ENST00000397728 OR10Z1Q8NGY1 313 aa13.1□□□□□ -0.31
LSS-202ENST00000397728 METTL1Q9UBP6 276 aaKnown RBP13.1□□□□□ -0.31
LSS-202ENST00000397728 CHST1O43916 411 aa13.1□□□□□ -0.31
LSS-202ENST00000397728 RPL27AP46776 148 aaKnown RBP13.1□□□□□ -0.31
LSS-202ENST00000397728 RAG2P55895 527 aa13.1□□□□□ -0.31
LSS-202ENST00000397728 PXDC1Q5TGL8 231 aa13.1□□□□□ -0.31
LSS-202ENST00000397728 MBD3L4A6NDZ8 208 aaPredicted RBP13.1□□□□□ -0.31
LSS-202ENST00000397728 MBD3L3A6NE82 208 aaPredicted RBP13.1□□□□□ -0.31
LSS-202ENST00000397728 MBD3L5A6NJ08 208 aaPredicted RBP13.1□□□□□ -0.31
LSS-202ENST00000397728 IQCF6A8MYZ5 107 aa13.1□□□□□ -0.31
LSS-202ENST00000397728 SLC6A1P30531 599 aa13.1□□□□□ -0.31
LSS-202ENST00000397728 ZNF260Q3ZCT1 412 aa13.1□□□□□ -0.31
LSS-202ENST00000397728 FFAR4Q5NUL3 377 aa13.1□□□□□ -0.31
LSS-202ENST00000397728 MBD3L2Q8NHZ7 208 aaPredicted RBP13.1□□□□□ -0.31
LSS-202ENST00000397728 POM121Q96HA1 1249 aa13.1□□□□□ -0.31
LSS-202ENST00000397728 TMEM208Q9BTX3 173 aa13.1□□□□□ -0.31
LSS-202ENST00000397728 WASHC3Q9Y3C0 194 aa13.1□□□□□ -0.31
LSS-202ENST00000397728 RPUSD4Q96CM3 377 aaKnown RBP13.1□□□□□ -0.31
LSS-202ENST00000397728 NOTCH3Q9UM47 2321 aa13.1□□□□□ -0.31
LSS-202ENST00000397728 B3GALNT1O75752 331 aa13.09□□□□□ -0.31
LSS-202ENST00000397728 RAB5CP51148 216 aa13.09□□□□□ -0.31
LSS-202ENST00000397728 C1QL2Q7Z5L3 287 aa13.09□□□□□ -0.31
LSS-202ENST00000397728 ASB13Q8WXK3 278 aa13.09□□□□□ -0.31
LSS-202ENST00000397728 WBP1Q96G27 269 aa13.09□□□□□ -0.31
LSS-202ENST00000397728 HPRT1P00492 218 aa13.09□□□□□ -0.31
LSS-202ENST00000397728 UNQ9370/PRO34162Q6UXP9 181 aa13.09□□□□□ -0.31
LSS-202ENST00000397728 SVBPQ8N300 66 aa13.09□□□□□ -0.31
LSS-202ENST00000397728 VOPP1Q96AW1 172 aa13.09□□□□□ -0.31
LSS-202ENST00000397728 TLNRD1Q9H1K6 362 aa13.09□□□□□ -0.31
LSS-202ENST00000397728 CLDN16Q9Y5I7 305 aa13.09□□□□□ -0.31
LSS-202ENST00000397728 SLC25A17O43808 307 aa13.09□□□□□ -0.31
LSS-202ENST00000397728 MPC2O95563 127 aa13.09□□□□□ -0.31
LSS-202ENST00000397728 HLA-DQB1P01920 261 aa13.09□□□□□ -0.31
LSS-202ENST00000397728 ADAD2Q8NCV1 583 aaKnown RBP13.09□□□□□ -0.31
LSS-202ENST00000397728 C4orf17Q53FE4 359 aa13.09□□□□□ -0.31
LSS-202ENST00000397728 ZNF362Q5T0B9 420 aaPredicted RBP13.09□□□□□ -0.31
LSS-202ENST00000397728 LAIR2Q6ISS4 152 aa13.09□□□□□ -0.31
LSS-202ENST00000397728 PRR27Q6MZM9 219 aa13.09□□□□□ -0.31
LSS-202ENST00000397728 CD200R1LQ6Q8B3 271 aa13.09□□□□□ -0.31
LSS-202ENST00000397728 OR4D10Q8NGI6 311 aa13.09□□□□□ -0.31
LSS-202ENST00000397728 SSC4DQ8WTU2 575 aa13.09□□□□□ -0.31
LSS-202ENST00000397728 CLCF1Q9UBD9 225 aa13.09□□□□□ -0.31
LSS-202ENST00000397728 THBDP07204 575 aa13.08□□□□□ -0.31
LSS-202ENST00000397728 KDF1Q8NAX2 398 aaPredicted RBP13.08□□□□□ -0.31
LSS-202ENST00000397728 DYNLRB2Q8TF09 96 aa13.08□□□□□ -0.31
LSS-202ENST00000397728 MARC2Q969Z3 335 aa13.08□□□□□ -0.31
LSS-202ENST00000397728 GSX2Q9BZM3 304 aa13.08□□□□□ -0.31
LSS-202ENST00000397728 HSF4Q9ULV5 492 aa13.08□□□□□ -0.31
LSS-202ENST00000397728 TMEM33P57088 247 aa13.08□□□□□ -0.32
LSS-202ENST00000397728 RHOBP62745 196 aa13.08□□□□□ -0.32
LSS-202ENST00000397728 TMEM255AQ5JRV8 349 aa13.08□□□□□ -0.32
LSS-202ENST00000397728 RPUSD3Q6P087 351 aaKnown RBP13.08□□□□□ -0.32
LSS-202ENST00000397728 OR1B1Q8NGR6 318 aa13.08□□□□□ -0.32
LSS-202ENST00000397728 NTNG2Q96CW9 530 aa13.08□□□□□ -0.32
LSS-202ENST00000397728 OR51B2Q9Y5P1 312 aa13.08□□□□□ -0.32
LSS-202ENST00000397728 V9GYS6 101 aa13.08□□□□□ -0.32
LSS-202ENST00000397728 TXNL1O43396 289 aa13.08□□□□□ -0.32
LSS-202ENST00000397728 CLN5O75503 358 aa13.08□□□□□ -0.32
LSS-202ENST00000397728 DBX2Q6ZNG2 339 aa13.08□□□□□ -0.32
LSS-202ENST00000397728 DUSP18Q8NEJ0 188 aa13.08□□□□□ -0.32
LSS-202ENST00000397728 OR5M8Q8NGP6 311 aa13.08□□□□□ -0.32
LSS-202ENST00000397728 GPHA2Q96T91 129 aa13.08□□□□□ -0.32
LSS-202ENST00000397728 P2RX4Q99571 388 aa13.08□□□□□ -0.32
LSS-202ENST00000397728 NRIP2Q9BQI9 281 aa13.08□□□□□ -0.32
LSS-202ENST00000397728 MARVELD1Q9BSK0 173 aa13.08□□□□□ -0.32
LSS-202ENST00000397728 NUP210Q8TEM1 1887 aaPredicted RBP13.08□□□□□ -0.32
LSS-202ENST00000397728 TSTD3H0UI37 97 aa13.08□□□□□ -0.32
LSS-202ENST00000397728 NPY1RP25929 384 aa13.08□□□□□ -0.32
LSS-202ENST00000397728 AKR1C3P42330 323 aa13.08□□□□□ -0.32
LSS-202ENST00000397728 B3GALT5-AS1P59052 145 aa13.08□□□□□ -0.32
LSS-202ENST00000397728 PCSK4Q6UW60 755 aa13.08□□□□□ -0.32
LSS-202ENST00000397728 UNQ5815/PRO19632Q6UWF5 114 aa13.08□□□□□ -0.32
LSS-202ENST00000397728 CD37P11049 281 aa13.07□□□□□ -0.32
LSS-202ENST00000397728 GZMKP49863 264 aa13.07□□□□□ -0.32
LSS-202ENST00000397728 HIST2H3AQ71DI3 136 aa13.07□□□□□ -0.32
LSS-202ENST00000397728 BLNKQ8WV28 456 aa13.07□□□□□ -0.32
LSS-202ENST00000397728 ABCA1O95477 2261 aa13.07□□□□□ -0.32
LSS-202ENST00000397728 IGFL3Q6UXB1 125 aa13.07□□□□□ -0.32
LSS-202ENST00000397728 SLC25A42Q86VD7 318 aa13.07□□□□□ -0.32
LSS-202ENST00000397728 Q8WTZ3 238 aa13.07□□□□□ -0.32
LSS-202ENST00000397728 SLC25A38Q96DW6 304 aa13.07□□□□□ -0.32
LSS-202ENST00000397728 JPT1Q9UK76 154 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms