RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 OR4F4Q96R69 305 aa20.39■□□□□ 0.85
CSNK1E-203ENST00000396832 TBX15Q96SF7 602 aa20.39■□□□□ 0.85
CSNK1E-203ENST00000396832 GALR2O43603 387 aaPredicted RBP20.38■□□□□ 0.85
CSNK1E-203ENST00000396832 SYNGR1O43759 233 aa20.38■□□□□ 0.85
CSNK1E-203ENST00000396832 FKBP2P26885 142 aaKnown RBP20.38■□□□□ 0.85
CSNK1E-203ENST00000396832 SRP14P37108 136 aaKnown RBP20.38■□□□□ 0.85
CSNK1E-203ENST00000396832 PCP4P48539 62 aa20.38■□□□□ 0.85
CSNK1E-203ENST00000396832 FOXG1P55316 489 aaPredicted RBP20.38■□□□□ 0.85
CSNK1E-203ENST00000396832 HBG1P69891 147 aa20.38■□□□□ 0.85
CSNK1E-203ENST00000396832 HBG2P69892 147 aa20.38■□□□□ 0.85
CSNK1E-203ENST00000396832 GATAD1Q8WUU5 269 aa20.38■□□□□ 0.85
CSNK1E-203ENST00000396832 CACNG5Q9UF02 275 aa20.38■□□□□ 0.85
CSNK1E-203ENST00000396832 ZNF716A6NP11 495 aa20.38■□□□□ 0.85
CSNK1E-203ENST00000396832 NUPR1O60356 82 aa20.38■□□□□ 0.85
CSNK1E-203ENST00000396832 RAC3P60763 192 aa20.38■□□□□ 0.85
CSNK1E-203ENST00000396832 PRDX4Q13162 271 aa20.38■□□□□ 0.85
CSNK1E-203ENST00000396832 GTF3C1Q12789 2109 aa20.37■□□□□ 0.85
CSNK1E-203ENST00000396832 MED12LQ86YW9 2145 aa20.37■□□□□ 0.85
CSNK1E-203ENST00000396832 MTCH1Q9NZJ7 389 aa20.37■□□□□ 0.85
CSNK1E-203ENST00000396832 C5orf49A4QMS7 147 aa20.37■□□□□ 0.85
CSNK1E-203ENST00000396832 NAPSAO96009 420 aa20.37■□□□□ 0.85
CSNK1E-203ENST00000396832 IRF2P14316 349 aa20.37■□□□□ 0.85
CSNK1E-203ENST00000396832 PNPLA5Q7Z6Z6 429 aaPredicted RBP20.37■□□□□ 0.85
CSNK1E-203ENST00000396832 GGNQ86UU5 652 aa20.37■□□□□ 0.85
CSNK1E-203ENST00000396832 SDSLQ96GA7 329 aa20.37■□□□□ 0.85
CSNK1E-203ENST00000396832 LILRA1O75019 489 aa20.36■□□□□ 0.85
CSNK1E-203ENST00000396832 SLC25A6P12236 298 aa20.36■□□□□ 0.85
CSNK1E-203ENST00000396832 CST9LP1Q5W188 147 aa20.36■□□□□ 0.85
CSNK1E-203ENST00000396832 TAF15Q92804 592 aaKnown RBP eCLIP20.36■□□□□ 0.85
CSNK1E-203ENST00000396832 GPR35Q9HC97 309 aa20.36■□□□□ 0.85
CSNK1E-203ENST00000396832 CBR3O75828 277 aa20.36■□□□□ 0.85
CSNK1E-203ENST00000396832 CHRNA7P36544 502 aa20.36■□□□□ 0.85
CSNK1E-203ENST00000396832 KCNIP4Q6PIL6 250 aa20.36■□□□□ 0.85
CSNK1E-203ENST00000396832 TRAPPC1Q9Y5R8 145 aa20.36■□□□□ 0.85
CSNK1E-203ENST00000396832 UBE2L5PA0A1B0GUS4 154 aa20.35■□□□□ 0.85
CSNK1E-203ENST00000396832 TOX3O15405 576 aaPredicted RBP20.35■□□□□ 0.85
CSNK1E-203ENST00000396832 CRYABP02511 175 aaKnown RBP20.35■□□□□ 0.85
CSNK1E-203ENST00000396832 CPT1CQ8TCG5 803 aa20.35■□□□□ 0.85
CSNK1E-203ENST00000396832 IMMP1LQ96LU5 166 aa20.35■□□□□ 0.85
CSNK1E-203ENST00000396832 SLC25A22Q9H936 323 aa20.35■□□□□ 0.85
CSNK1E-203ENST00000396832 ERRFI1Q9UJM3 462 aaPredicted RBP20.35■□□□□ 0.85
CSNK1E-203ENST00000396832 MRPS18CQ9Y3D5 142 aaKnown RBP20.35■□□□□ 0.85
CSNK1E-203ENST00000396832 IL3RAP26951 378 aa20.35■□□□□ 0.85
CSNK1E-203ENST00000396832 RPS16P62249 146 aaKnown RBP20.35■□□□□ 0.85
CSNK1E-203ENST00000396832 SPANXN5Q5MJ07 72 aa20.35■□□□□ 0.85
CSNK1E-203ENST00000396832 FAM78BQ5VT40 261 aa20.35■□□□□ 0.85
CSNK1E-203ENST00000396832 REPIN1Q9BWE0 567 aaKnown RBP20.35■□□□□ 0.85
CSNK1E-203ENST00000396832 ZNF552Q9H707 407 aaPredicted RBP20.35■□□□□ 0.85
CSNK1E-203ENST00000396832 DSPP15924 2871 aaKnown RBP20.35■□□□□ 0.85
CSNK1E-203ENST00000396832 DOCK10Q96BY6 2186 aa20.35■□□□□ 0.85
CSNK1E-203ENST00000396832 KLF7O75840 302 aaPredicted RBP20.34■□□□□ 0.85
CSNK1E-203ENST00000396832 CD33P20138 364 aa20.34■□□□□ 0.85
CSNK1E-203ENST00000396832 EPHA8P29322 1005 aaPredicted RBP20.34■□□□□ 0.85
CSNK1E-203ENST00000396832 CLDN15P56746 228 aa20.34■□□□□ 0.85
CSNK1E-203ENST00000396832 B3GALT5-AS1P59052 145 aa20.34■□□□□ 0.85
CSNK1E-203ENST00000396832 VASH2Q86V25 355 aa20.34■□□□□ 0.85
CSNK1E-203ENST00000396832 OR1A1Q9P1Q5 309 aa20.34■□□□□ 0.85
CSNK1E-203ENST00000396832 PPP1R3CQ9UQK1 317 aa20.34■□□□□ 0.85
CSNK1E-203ENST00000396832 LOC400499M0QZD8 3231 aa20.34■□□□□ 0.85
CSNK1E-203ENST00000396832 CD300LBA8K4G0 201 aa20.34■□□□□ 0.85
CSNK1E-203ENST00000396832 PDGFBP01127 241 aaPredicted RBP20.34■□□□□ 0.85
CSNK1E-203ENST00000396832 NGFP01138 241 aa20.34■□□□□ 0.85
CSNK1E-203ENST00000396832 S100GP29377 79 aa20.34■□□□□ 0.85
CSNK1E-203ENST00000396832 GCH1P30793 250 aa20.34■□□□□ 0.85
CSNK1E-203ENST00000396832 SRSF7Q16629 238 aaKnown RBP eCLIP20.34■□□□□ 0.85
CSNK1E-203ENST00000396832 ARSJQ5FYB0 599 aaPredicted RBP20.34■□□□□ 0.85
CSNK1E-203ENST00000396832 DIRC2Q96SL1 478 aa20.34■□□□□ 0.85
CSNK1E-203ENST00000396832 A0A0U1RQK1 487 aa20.34■□□□□ 0.85
CSNK1E-203ENST00000396832 KIR2DS1A0A191URI9 304 aa20.34■□□□□ 0.85
CSNK1E-203ENST00000396832 ZNF320A2RRD8 509 aa20.34■□□□□ 0.85
CSNK1E-203ENST00000396832 LINC00614P0C842 121 aa20.34■□□□□ 0.85
CSNK1E-203ENST00000396832 KIR2DS4P43632 304 aa20.34■□□□□ 0.85
CSNK1E-203ENST00000396832 KIR2DS1Q14954 304 aa20.34■□□□□ 0.85
CSNK1E-203ENST00000396832 ZCCHC14Q8WYQ9 949 aaKnown RBP20.34■□□□□ 0.85
CSNK1E-203ENST00000396832 USF3Q68DE3 2245 aa20.33■□□□□ 0.85
CSNK1E-203ENST00000396832 ZNF503-AS2A6NEH8 195 aa20.33■□□□□ 0.85
CSNK1E-203ENST00000396832 OTX2P32243 289 aa20.33■□□□□ 0.85
CSNK1E-203ENST00000396832 RPL15P61313 204 aaKnown RBP20.33■□□□□ 0.85
CSNK1E-203ENST00000396832 TDRG1Q3Y452 100 aa20.33■□□□□ 0.85
CSNK1E-203ENST00000396832 LCN2P80188 198 aa20.33■□□□□ 0.84
CSNK1E-203ENST00000396832 PARD6AQ9NPB6 346 aa20.33■□□□□ 0.84
CSNK1E-203ENST00000396832 RBM7Q9Y580 266 aaKnown RBP20.33■□□□□ 0.84
CSNK1E-203ENST00000396832 ATP23Q9Y6H3 246 aa20.33■□□□□ 0.84
CSNK1E-203ENST00000396832 IGKV1-39P01597 117 aa20.32■□□□□ 0.84
CSNK1E-203ENST00000396832 IGKV1D-39P04432 117 aa20.32■□□□□ 0.84
CSNK1E-203ENST00000396832 CTXN2P0C2S0 81 aa20.32■□□□□ 0.84
CSNK1E-203ENST00000396832 MRPS11P82912 194 aaKnown RBP20.32■□□□□ 0.84
CSNK1E-203ENST00000396832 ACSM6Q6P461 480 aa20.32■□□□□ 0.84
CSNK1E-203ENST00000396832 P04436 131 aa20.32■□□□□ 0.84
CSNK1E-203ENST00000396832 GDF1P27539 372 aa20.32■□□□□ 0.84
CSNK1E-203ENST00000396832 OR10V1Q8NGI7 309 aa20.32■□□□□ 0.84
CSNK1E-203ENST00000396832 SGCZQ96LD1 299 aa20.32■□□□□ 0.84
CSNK1E-203ENST00000396832 IMMP2LQ96T52 175 aa20.32■□□□□ 0.84
CSNK1E-203ENST00000396832 OPN3Q9H1Y3 402 aaPredicted RBP20.32■□□□□ 0.84
CSNK1E-203ENST00000396832 LPAR2Q9HBW0 351 aa20.32■□□□□ 0.84
CSNK1E-203ENST00000396832 KCNS2Q9ULS6 477 aa20.32■□□□□ 0.84
CSNK1E-203ENST00000396832 TRAPPC2LH3BP13 241 aa20.31■□□□□ 0.84
CSNK1E-203ENST00000396832 BRS3P32247 399 aa20.31■□□□□ 0.84
CSNK1E-203ENST00000396832 DMRTA1Q5VZB9 504 aa20.31■□□□□ 0.84
CSNK1E-203ENST00000396832 OR8G2PQ6IF36 304 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms