RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 CD27P26842 260 aa7.58□□□□□ -1.2
RTN4-206ENST00000394611 THBS4P35443 961 aa7.58□□□□□ -1.2
RTN4-206ENST00000394611 YPEL5P62699 121 aa7.58□□□□□ -1.2
RTN4-206ENST00000394611 HSPB2Q16082 182 aa7.58□□□□□ -1.2
RTN4-206ENST00000394611 PRAMEF5Q5TYX0 476 aa7.58□□□□□ -1.2
RTN4-206ENST00000394611 PRAMEF6Q5VXH4 476 aa7.58□□□□□ -1.2
RTN4-206ENST00000394611 PMS2CLQ68D20 193 aa7.58□□□□□ -1.2
RTN4-206ENST00000394611 FAM166AQ6J272 317 aa7.58□□□□□ -1.2
RTN4-206ENST00000394611 S100A7AQ86SG5 101 aa7.58□□□□□ -1.2
RTN4-206ENST00000394611 ZDHHC16Q969W1 377 aa7.58□□□□□ -1.2
RTN4-206ENST00000394611 GPR146Q96CH1 333 aa7.58□□□□□ -1.2
RTN4-206ENST00000394611 SEBOXQ9HB31 216 aaPredicted RBP7.58□□□□□ -1.2
RTN4-206ENST00000394611 DUSP13Q9UII6 198 aa7.58□□□□□ -1.2
RTN4-206ENST00000394611 LOC102725191A0A1B0GVB3 256 aa7.57□□□□□ -1.2
RTN4-206ENST00000394611 TNFSF14O43557 240 aa7.57□□□□□ -1.2
RTN4-206ENST00000394611 COX5BP10606 129 aa7.57□□□□□ -1.2
RTN4-206ENST00000394611 TPPP2P59282 170 aa7.57□□□□□ -1.2
RTN4-206ENST00000394611 SRPXP78539 464 aa7.57□□□□□ -1.2
RTN4-206ENST00000394611 TMEM183BQ1AE95 376 aa7.57□□□□□ -1.2
RTN4-206ENST00000394611 PLPPR5Q32ZL2 321 aa7.57□□□□□ -1.2
RTN4-206ENST00000394611 Q5PR19 223 aa7.57□□□□□ -1.2
RTN4-206ENST00000394611 DEGS2Q6QHC5 323 aa7.57□□□□□ -1.2
RTN4-206ENST00000394611 OR1F12Q8NHA8 337 aa7.57□□□□□ -1.2
RTN4-206ENST00000394611 APH1AQ96BI3 265 aa7.57□□□□□ -1.2
RTN4-206ENST00000394611 UHRF2Q96PU4 802 aa7.57□□□□□ -1.2
RTN4-206ENST00000394611 PMCHL2Q9BQD1 86 aa7.57□□□□□ -1.2
RTN4-206ENST00000394611 NAA38Q9BRA0 125 aaKnown RBP7.57□□□□□ -1.2
RTN4-206ENST00000394611 SSBP3Q9BWW4 388 aaPredicted RBP7.57□□□□□ -1.2
RTN4-206ENST00000394611 ACTR3CQ9C0K3 210 aaPredicted RBP7.57□□□□□ -1.2
RTN4-206ENST00000394611 OR2D2Q9H210 308 aa7.57□□□□□ -1.2
RTN4-206ENST00000394611 MOB1AQ9H8S9 216 aa7.57□□□□□ -1.2
RTN4-206ENST00000394611 DIRC3C9JPN6 131 aa7.57□□□□□ -1.2
RTN4-206ENST00000394611 K7N7A8 449 aa7.57□□□□□ -1.2
RTN4-206ENST00000394611 OR10J4P0C629 311 aa7.57□□□□□ -1.2
RTN4-206ENST00000394611 COX5AP20674 150 aa7.57□□□□□ -1.2
RTN4-206ENST00000394611 GCH1P30793 250 aa7.57□□□□□ -1.2
RTN4-206ENST00000394611 ATP5G3P48201 142 aa7.57□□□□□ -1.2
RTN4-206ENST00000394611 LYSMD4Q5XG99 296 aa7.57□□□□□ -1.2
RTN4-206ENST00000394611 SLC23A3Q6PIS1 610 aa7.57□□□□□ -1.2
RTN4-206ENST00000394611 CNEP1R1Q8N9A8 125 aa7.57□□□□□ -1.2
RTN4-206ENST00000394611 CLDND2Q8NHS1 167 aa7.57□□□□□ -1.2
RTN4-206ENST00000394611 ST8SIA1Q92185 356 aa7.57□□□□□ -1.2
RTN4-206ENST00000394611 MCRIP2Q9BUT9 160 aaKnown RBP7.57□□□□□ -1.2
RTN4-206ENST00000394611 WDFY3Q8IZQ1 3526 aa7.57□□□□□ -1.2
RTN4-206ENST00000394611 CD82P27701 267 aa7.57□□□□□ -1.2
RTN4-206ENST00000394611 CHRNB4P30926 498 aa7.57□□□□□ -1.2
RTN4-206ENST00000394611 LHX2P50458 406 aa7.57□□□□□ -1.2
RTN4-206ENST00000394611 NUTF2P61970 127 aaKnown RBP7.57□□□□□ -1.2
RTN4-206ENST00000394611 FOXO1Q12778 655 aa7.57□□□□□ -1.2
RTN4-206ENST00000394611 MUC15Q8N387 334 aa7.57□□□□□ -1.2
RTN4-206ENST00000394611 OR5AU1Q8NGC0 362 aa7.57□□□□□ -1.2
RTN4-206ENST00000394611 MRGPRDQ8TDS7 321 aa7.57□□□□□ -1.2
RTN4-206ENST00000394611 TMEM68Q96MH6 324 aa7.57□□□□□ -1.2
RTN4-206ENST00000394611 DIRC2Q96SL1 478 aa7.57□□□□□ -1.2
RTN4-206ENST00000394611 FOXB1Q99853 325 aa7.57□□□□□ -1.2
RTN4-206ENST00000394611 MRPL37Q9BZE1 423 aaKnown RBP7.57□□□□□ -1.2
RTN4-206ENST00000394611 DBX1A6NMT0 343 aa7.56□□□□□ -1.2
RTN4-206ENST00000394611 PPIHO43447 177 aaKnown RBP7.56□□□□□ -1.2
RTN4-206ENST00000394611 CCL3P10147 92 aa7.56□□□□□ -1.2
RTN4-206ENST00000394611 CDC34P49427 236 aaPredicted RBP7.56□□□□□ -1.2
RTN4-206ENST00000394611 NUFIP2Q7Z417 695 aaKnown RBP7.56□□□□□ -1.2
RTN4-206ENST00000394611 OR8I2Q8N0Y5 310 aa7.56□□□□□ -1.2
RTN4-206ENST00000394611 PRSS33Q8NF86 280 aa7.56□□□□□ -1.2
RTN4-206ENST00000394611 FLVCR1-AS1Q8TAF5 88 aa7.56□□□□□ -1.2
RTN4-206ENST00000394611 ADIPOR1Q96A54 375 aa7.56□□□□□ -1.2
RTN4-206ENST00000394611 ABHD14BQ96IU4 210 aa7.56□□□□□ -1.2
RTN4-206ENST00000394611 ZNF552Q9H707 407 aaPredicted RBP7.56□□□□□ -1.2
RTN4-206ENST00000394611 TIAF1O95411 115 aa7.56□□□□□ -1.2
RTN4-206ENST00000394611 ECI1P42126 302 aa7.56□□□□□ -1.2
RTN4-206ENST00000394611 UQCRFS1P47985 274 aa7.56□□□□□ -1.2
RTN4-206ENST00000394611 RAB7AP51149 207 aa7.56□□□□□ -1.2
RTN4-206ENST00000394611 ZNF137PP52743 207 aa7.56□□□□□ -1.2
RTN4-206ENST00000394611 TCF15Q12870 199 aa7.56□□□□□ -1.2
RTN4-206ENST00000394611 TDRG1Q3Y452 100 aa7.56□□□□□ -1.2
RTN4-206ENST00000394611 FAM53AQ6NSI3 398 aaPredicted RBP7.56□□□□□ -1.2
RTN4-206ENST00000394611 GCNT2Q8N0V5 402 aa7.56□□□□□ -1.2
RTN4-206ENST00000394611 RAB24Q969Q5 203 aa7.56□□□□□ -1.2
RTN4-206ENST00000394611 NEIL1Q96FI4 390 aaPredicted RBP7.56□□□□□ -1.2
RTN4-206ENST00000394611 LYZL4Q96KX0 146 aa7.56□□□□□ -1.2
RTN4-206ENST00000394611 TMEM208Q9BTX3 173 aa7.56□□□□□ -1.2
RTN4-206ENST00000394611 TMEM222Q9H0R3 208 aa7.56□□□□□ -1.2
RTN4-206ENST00000394611 C19orf25Q9UFG5 118 aaPredicted RBP7.56□□□□□ -1.2
RTN4-206ENST00000394611 HS3ST3A1Q9Y663 406 aa7.56□□□□□ -1.2
RTN4-206ENST00000394611 PATE3B3GLJ2 98 aa7.56□□□□□ -1.2
RTN4-206ENST00000394611 PLAUP00749 431 aa7.56□□□□□ -1.2
RTN4-206ENST00000394611 ISG15P05161 165 aa7.56□□□□□ -1.2
RTN4-206ENST00000394611 DUSP3P51452 185 aaPredicted RBP7.56□□□□□ -1.2
RTN4-206ENST00000394611 TFF3Q07654 80 aa7.56□□□□□ -1.2
RTN4-206ENST00000394611 GPBAR1Q8TDU6 330 aa7.56□□□□□ -1.2
RTN4-206ENST00000394611 DNASE2BQ8WZ79 361 aa7.56□□□□□ -1.2
RTN4-206ENST00000394611 PSG11Q9UQ72 335 aa7.56□□□□□ -1.2
RTN4-206ENST00000394611 KIR2DS1A0A191URI9 304 aa7.56□□□□□ -1.2
RTN4-206ENST00000394611 LRP5LA4QPB2 252 aa7.56□□□□□ -1.2
RTN4-206ENST00000394611 H3BTX0 84 aa7.56□□□□□ -1.2
RTN4-206ENST00000394611 PITX3O75364 302 aa7.56□□□□□ -1.2
RTN4-206ENST00000394611 TMEM50AO95807 157 aa7.56□□□□□ -1.2
RTN4-206ENST00000394611 KIR2DS4P43632 304 aa7.56□□□□□ -1.2
RTN4-206ENST00000394611 CLDN15P56746 228 aa7.56□□□□□ -1.2
RTN4-206ENST00000394611 KIR2DS1Q14954 304 aa7.56□□□□□ -1.2
RTN4-206ENST00000394611 SPATA45Q537H7 98 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms