RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 APELAP0DMC3 54 aa13.5□□□□□ -0.25
USP43-201ENST00000285199 KMT5CQ86Y97 462 aa13.5□□□□□ -0.25
USP43-201ENST00000285199 OR52L2PQ8NGH6 319 aa13.5□□□□□ -0.25
USP43-201ENST00000285199 IGKV1D-13A0A0B4J2D9 117 aa13.5□□□□□ -0.25
USP43-201ENST00000285199 CHEK1O14757 476 aa13.5□□□□□ -0.25
USP43-201ENST00000285199 IGKV1-13P0DP09 117 aa13.5□□□□□ -0.25
USP43-201ENST00000285199 HOXA6P31267 233 aa13.5□□□□□ -0.25
USP43-201ENST00000285199 CDPF1Q6NVV7 123 aa13.5□□□□□ -0.25
USP43-201ENST00000285199 KLHDC1Q8N7A1 406 aa13.5□□□□□ -0.25
USP43-201ENST00000285199 FOXD3Q9UJU5 478 aaPredicted RBP13.5□□□□□ -0.25
USP43-201ENST00000285199 ICAM4Q14773 271 aa13.5□□□□□ -0.25
USP43-201ENST00000285199 ZNF124Q15973 351 aa13.5□□□□□ -0.25
USP43-201ENST00000285199 NHLRC2Q8NBF2 726 aa13.5□□□□□ -0.25
USP43-201ENST00000285199 OR2Z1Q8NG97 314 aa13.5□□□□□ -0.25
USP43-201ENST00000285199 SMDT1Q9H4I9 107 aa13.5□□□□□ -0.25
USP43-201ENST00000285199 ZG16O60844 167 aa13.5□□□□□ -0.25
USP43-201ENST00000285199 CD55P08174 381 aa13.5□□□□□ -0.25
USP43-201ENST00000285199 CTAG1AP78358 180 aa13.5□□□□□ -0.25
USP43-201ENST00000285199 DMWDQ09019 674 aa13.5□□□□□ -0.25
USP43-201ENST00000285199 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.5□□□□□ -0.25
USP43-201ENST00000285199 KCNE4Q8WWG9 221 aa13.5□□□□□ -0.25
USP43-201ENST00000285199 TRIB1Q96RU8 372 aa13.5□□□□□ -0.25
USP43-201ENST00000285199 SSUH2Q9Y2M2 353 aa13.5□□□□□ -0.25
USP43-201ENST00000285199 COL6A6A6NMZ7 2263 aa13.49□□□□□ -0.25
USP43-201ENST00000285199 SERTM2A0A1B0GWG4 89 aa13.49□□□□□ -0.25
USP43-201ENST00000285199 EFEMP2O95967 443 aa13.49□□□□□ -0.25
USP43-201ENST00000285199 FCER1GP30273 86 aa13.49□□□□□ -0.25
USP43-201ENST00000285199 FOXO1Q12778 655 aa13.49□□□□□ -0.25
USP43-201ENST00000285199 EPOPA6NHQ4 379 aa13.49□□□□□ -0.25
USP43-201ENST00000285199 SPRY3O43610 288 aa13.49□□□□□ -0.25
USP43-201ENST00000285199 SRFP11831 508 aa13.49□□□□□ -0.25
USP43-201ENST00000285199 LIFP15018 202 aa13.49□□□□□ -0.25
USP43-201ENST00000285199 GNB1P62873 340 aa13.49□□□□□ -0.25
USP43-201ENST00000285199 HERPUD1Q15011 391 aa13.49□□□□□ -0.25
USP43-201ENST00000285199 TCF23Q7RTU1 214 aa13.49□□□□□ -0.25
USP43-201ENST00000285199 OR8I2Q8N0Y5 310 aa13.49□□□□□ -0.25
USP43-201ENST00000285199 NOL4LQ96MY1 436 aaPredicted RBP13.49□□□□□ -0.25
USP43-201ENST00000285199 TECTBQ96PL2 329 aa13.49□□□□□ -0.25
USP43-201ENST00000285199 HIST1H2BLQ99880 126 aa13.49□□□□□ -0.25
USP43-201ENST00000285199 LDLRAD4O15165 306 aa13.49□□□□□ -0.25
USP43-201ENST00000285199 TFPI2P48307 235 aa13.49□□□□□ -0.25
USP43-201ENST00000285199 VKORC1L1Q8N0U8 176 aa13.49□□□□□ -0.25
USP43-201ENST00000285199 COMMD5Q9GZQ3 224 aa13.49□□□□□ -0.25
USP43-201ENST00000285199 GLRX2Q9NS18 164 aa13.49□□□□□ -0.25
USP43-201ENST00000285199 A6NNC1 897 aa13.48□□□□□ -0.25
USP43-201ENST00000285199 TAS2R60P59551 318 aa13.48□□□□□ -0.25
USP43-201ENST00000285199 MIC13Q5XKP0 118 aa13.48□□□□□ -0.25
USP43-201ENST00000285199 GATAD1Q8WUU5 269 aa13.48□□□□□ -0.25
USP43-201ENST00000285199 R3HDM4Q96D70 268 aa13.48□□□□□ -0.25
USP43-201ENST00000285199 ANAPC16Q96DE5 110 aa13.48□□□□□ -0.25
USP43-201ENST00000285199 LYZL4Q96KX0 146 aa13.48□□□□□ -0.25
USP43-201ENST00000285199 ZNF552Q9H707 407 aaPredicted RBP13.48□□□□□ -0.25
USP43-201ENST00000285199 SLC17A3O00476 420 aa13.48□□□□□ -0.25
USP43-201ENST00000285199 RRP8O43159 456 aaKnown RBP13.48□□□□□ -0.25
USP43-201ENST00000285199 TMEM183AQ8IXX5 376 aa13.48□□□□□ -0.25
USP43-201ENST00000285199 SLC25A45Q8N413 288 aa13.48□□□□□ -0.25
USP43-201ENST00000285199 GALNT14Q96FL9 552 aa13.48□□□□□ -0.25
USP43-201ENST00000285199 WDR61Q9GZS3 305 aaKnown RBP13.48□□□□□ -0.25
USP43-201ENST00000285199 RANP62826 216 aaKnown RBP13.48□□□□□ -0.25
USP43-201ENST00000285199 SCGB2A2Q13296 93 aa13.48□□□□□ -0.25
USP43-201ENST00000285199 ZNF506Q5JVG8 444 aa13.48□□□□□ -0.25
USP43-201ENST00000285199 FNDC7Q5VTL7 733 aa13.48□□□□□ -0.25
USP43-201ENST00000285199 SLC35E1Q96K37 410 aa13.48□□□□□ -0.25
USP43-201ENST00000285199 ANGPTL4Q9BY76 406 aa13.48□□□□□ -0.25
USP43-201ENST00000285199 OR2J1Q9GZK6 312 aa13.48□□□□□ -0.25
USP43-201ENST00000285199 MANBALQ9NQG1 85 aa13.48□□□□□ -0.25
USP43-201ENST00000285199 SELENOKQ9Y6D0 94 aa13.48□□□□□ -0.25
USP43-201ENST00000285199 NPIPB7O75200 414 aa13.47□□□□□ -0.25
USP43-201ENST00000285199 SERF2P84101 59 aa13.47□□□□□ -0.25
USP43-201ENST00000285199 HGFACQ04756 655 aa13.47□□□□□ -0.25
USP43-201ENST00000285199 CLDND2Q8NHS1 167 aa13.47□□□□□ -0.25
USP43-201ENST00000285199 TUBA4BQ9H853 241 aa13.47□□□□□ -0.25
USP43-201ENST00000285199 KCNIP2Q9NS61 270 aa13.47□□□□□ -0.25
USP43-201ENST00000285199 K7N7A8 449 aa13.47□□□□□ -0.25
USP43-201ENST00000285199 EFNA2O43921 213 aa13.47□□□□□ -0.25
USP43-201ENST00000285199 IGHV3-48P01763 117 aa13.47□□□□□ -0.25
USP43-201ENST00000285199 HIST3H3Q16695 136 aa13.47□□□□□ -0.25
USP43-201ENST00000285199 PRR31Q5SQ13 230 aa13.47□□□□□ -0.25
USP43-201ENST00000285199 OR1L1Q8NH94 360 aa13.47□□□□□ -0.25
USP43-201ENST00000285199 SRXN1Q9BYN0 137 aa13.47□□□□□ -0.25
USP43-201ENST00000285199 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.47□□□□□ -0.25
USP43-201ENST00000285199 TRBV6-7A0A0A0MS04 114 aa13.47□□□□□ -0.25
USP43-201ENST00000285199 C1QTNF9BB2RNN3 333 aa13.47□□□□□ -0.25
USP43-201ENST00000285199 PATE3B3GLJ2 98 aa13.47□□□□□ -0.25
USP43-201ENST00000285199 KLRC4-KLRK1H3BQV0 150 aa13.47□□□□□ -0.25
USP43-201ENST00000285199 BMPR1BO00238 502 aa13.47□□□□□ -0.25
USP43-201ENST00000285199 MAGEA5P43359 124 aa13.47□□□□□ -0.25
USP43-201ENST00000285199 ZNF137PP52743 207 aa13.47□□□□□ -0.25
USP43-201ENST00000285199 RPEL1Q2QD12 228 aa13.47□□□□□ -0.25
USP43-201ENST00000285199 C6orf15Q6UXA7 325 aaPredicted RBP13.47□□□□□ -0.25
USP43-201ENST00000285199 FAM216AQ8WUB2 273 aa13.47□□□□□ -0.25
USP43-201ENST00000285199 ZDHHC16Q969W1 377 aa13.47□□□□□ -0.25
USP43-201ENST00000285199 WNT10AQ9GZT5 417 aa13.47□□□□□ -0.25
USP43-201ENST00000285199 LOC390937A0A1W2PQ73 354 aa13.46□□□□□ -0.25
USP43-201ENST00000285199 HOXB1P14653 301 aaPredicted RBP13.46□□□□□ -0.25
USP43-201ENST00000285199 S100A7P31151 101 aa13.46□□□□□ -0.25
USP43-201ENST00000285199 SRD5A2P31213 254 aa13.46□□□□□ -0.25
USP43-201ENST00000285199 OR2D3Q8NGH3 330 aa13.46□□□□□ -0.25
USP43-201ENST00000285199 TAAR6Q96RI8 345 aa13.46□□□□□ -0.25
USP43-201ENST00000285199 ATP23Q9Y6H3 246 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms