RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 EPHA1P21709 976 aa13.8□□□□□ -0.2
CCDC40-201ENST00000269318 BRWD1-AS2P59051 145 aa13.8□□□□□ -0.2
CCDC40-201ENST00000269318 NHLH2Q02577 135 aa13.8□□□□□ -0.2
CCDC40-201ENST00000269318 IZUMO4Q1ZYL8 232 aa13.8□□□□□ -0.2
CCDC40-201ENST00000269318 UNQ6494/PRO21346Q6UXR6 183 aa13.8□□□□□ -0.2
CCDC40-201ENST00000269318 DEFB108BQ8NET1 73 aa13.8□□□□□ -0.2
CCDC40-201ENST00000269318 RNF141Q8WVD5 230 aa13.8□□□□□ -0.2
CCDC40-201ENST00000269318 NEUROG1Q92886 237 aa13.8□□□□□ -0.2
CCDC40-201ENST00000269318 FAM234AQ9H0X4 552 aa13.8□□□□□ -0.2
CCDC40-201ENST00000269318 ZNF665Q9H7R5 613 aa13.8□□□□□ -0.2
CCDC40-201ENST00000269318 LYRM2Q9NU23 88 aaPredicted RBP13.8□□□□□ -0.2
CCDC40-201ENST00000269318 DYSFO75923 2080 aa13.8□□□□□ -0.2
CCDC40-201ENST00000269318 NBEAQ8NFP9 2946 aa13.8□□□□□ -0.2
CCDC40-201ENST00000269318 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.8□□□□□ -0.2
CCDC40-201ENST00000269318 ST8SIA5O15466 376 aa13.8□□□□□ -0.2
CCDC40-201ENST00000269318 YPEL1O60688 119 aa13.8□□□□□ -0.2
CCDC40-201ENST00000269318 RAMP3O60896 148 aa13.8□□□□□ -0.2
CCDC40-201ENST00000269318 GYPAP02724 150 aa13.8□□□□□ -0.2
CCDC40-201ENST00000269318 ADORA2A-AS1P86434 159 aa13.8□□□□□ -0.2
CCDC40-201ENST00000269318 EWSR1Q01844 656 aaKnown RBP eCLIP13.8□□□□□ -0.2
CCDC40-201ENST00000269318 C17orf58Q2M2W7 97 aa13.8□□□□□ -0.2
CCDC40-201ENST00000269318 MORN2Q502X0 79 aa13.8□□□□□ -0.2
CCDC40-201ENST00000269318 FAM216AQ8WUB2 273 aa13.8□□□□□ -0.2
CCDC40-201ENST00000269318 ZCCHC14Q8WYQ9 949 aaKnown RBP13.8□□□□□ -0.2
CCDC40-201ENST00000269318 YPEL2Q96QA6 119 aa13.8□□□□□ -0.2
CCDC40-201ENST00000269318 CCL13Q99616 98 aa13.8□□□□□ -0.2
CCDC40-201ENST00000269318 CALYQ9NYX4 217 aa13.8□□□□□ -0.2
CCDC40-201ENST00000269318 PSG11Q9UQ72 335 aa13.8□□□□□ -0.2
CCDC40-201ENST00000269318 SMG1Q96Q15 3661 aaKnown RBP13.79□□□□□ -0.2
CCDC40-201ENST00000269318 SPTA1P02549 2419 aa13.79□□□□□ -0.2
CCDC40-201ENST00000269318 RAI1Q7Z5J4 1906 aaPredicted RBP13.79□□□□□ -0.2
CCDC40-201ENST00000269318 IGSF23A1L1A6 192 aa13.79□□□□□ -0.2
CCDC40-201ENST00000269318 FAM24AA6NFZ4 105 aa13.79□□□□□ -0.2
CCDC40-201ENST00000269318 GRNP28799 593 aaKnown RBP13.79□□□□□ -0.2
CCDC40-201ENST00000269318 LPAR6P43657 344 aa13.79□□□□□ -0.2
CCDC40-201ENST00000269318 LTC4SQ16873 150 aa13.79□□□□□ -0.2
CCDC40-201ENST00000269318 TCF23Q7RTU1 214 aa13.79□□□□□ -0.2
CCDC40-201ENST00000269318 ODF3L1Q8IXM7 274 aa13.79□□□□□ -0.2
CCDC40-201ENST00000269318 FAM216BQ8N7L0 139 aa13.79□□□□□ -0.2
CCDC40-201ENST00000269318 EDARADDQ8WWZ3 215 aa13.79□□□□□ -0.2
CCDC40-201ENST00000269318 SAP30LQ9HAJ7 183 aa13.79□□□□□ -0.2
CCDC40-201ENST00000269318 CACNG5Q9UF02 275 aa13.79□□□□□ -0.2
CCDC40-201ENST00000269318 LRRC30A6NM36 301 aa13.78□□□□□ -0.2
CCDC40-201ENST00000269318 SIGLEC5O15389 551 aa13.78□□□□□ -0.2
CCDC40-201ENST00000269318 CHST1O43916 411 aa13.78□□□□□ -0.2
CCDC40-201ENST00000269318 NXPH3O95157 252 aa13.78□□□□□ -0.2
CCDC40-201ENST00000269318 ID4P47928 161 aa13.78□□□□□ -0.2
CCDC40-201ENST00000269318 AKR1C2P52895 323 aa13.78□□□□□ -0.2
CCDC40-201ENST00000269318 PAX9P55771 341 aa13.78□□□□□ -0.2
CCDC40-201ENST00000269318 CATR1Q13166 79 aa13.78□□□□□ -0.2
CCDC40-201ENST00000269318 CDSNQ15517 529 aa13.78□□□□□ -0.2
CCDC40-201ENST00000269318 MST1LQ2TV78 715 aa13.78□□□□□ -0.2
CCDC40-201ENST00000269318 EIF5AL1Q6IS14 154 aaKnown RBP13.78□□□□□ -0.2
CCDC40-201ENST00000269318 BTNL3Q6UXE8 466 aa13.78□□□□□ -0.2
CCDC40-201ENST00000269318 ZNF66Q6ZN08 573 aa13.78□□□□□ -0.2
CCDC40-201ENST00000269318 ZNF295-AS1Q8N0V1 137 aa13.78□□□□□ -0.2
CCDC40-201ENST00000269318 RNASE11Q8TAA1 199 aaKnown RBP13.78□□□□□ -0.2
CCDC40-201ENST00000269318 LINC01560Q8TB33 94 aa13.78□□□□□ -0.2
CCDC40-201ENST00000269318 EGLN1Q9GZT9 426 aa13.78□□□□□ -0.2
CCDC40-201ENST00000269318 FAM212BQ9NTI7 297 aaPredicted RBP13.78□□□□□ -0.2
CCDC40-201ENST00000269318 GNG12Q9UBI6 72 aa13.78□□□□□ -0.2
CCDC40-201ENST00000269318 CD3EP07766 207 aa13.78□□□□□ -0.2
CCDC40-201ENST00000269318 P0C879 139 aa13.78□□□□□ -0.2
CCDC40-201ENST00000269318 CAV2P51636 162 aa13.78□□□□□ -0.2
CCDC40-201ENST00000269318 EFNB3Q15768 340 aa13.78□□□□□ -0.2
CCDC40-201ENST00000269318 FGFRL1Q8N441 504 aa13.78□□□□□ -0.2
CCDC40-201ENST00000269318 TMEM252Q8N6L7 170 aa13.78□□□□□ -0.2
CCDC40-201ENST00000269318 TCTEX1D1Q8N7M0 179 aa13.78□□□□□ -0.2
CCDC40-201ENST00000269318 COQ3Q9NZJ6 369 aa13.78□□□□□ -0.2
CCDC40-201ENST00000269318 PLA2G2EQ9NZK7 142 aa13.78□□□□□ -0.2
CCDC40-201ENST00000269318 NDRG3Q9UGV2 375 aa13.78□□□□□ -0.2
CCDC40-201ENST00000269318 NCOR2Q9Y618 2525 aa13.77□□□□□ -0.2
CCDC40-201ENST00000269318 C17orf98A8MV24 154 aa13.77□□□□□ -0.21
CCDC40-201ENST00000269318 LGALS8O00214 317 aa13.77□□□□□ -0.21
CCDC40-201ENST00000269318 PROP1O75360 226 aa13.77□□□□□ -0.21
CCDC40-201ENST00000269318 CLDN1O95832 211 aa13.77□□□□□ -0.21
CCDC40-201ENST00000269318 OMGP23515 440 aa13.77□□□□□ -0.21
CCDC40-201ENST00000269318 VAMP2P63027 116 aa13.77□□□□□ -0.21
CCDC40-201ENST00000269318 SWI5Q1ZZU3 235 aa13.77□□□□□ -0.21
CCDC40-201ENST00000269318 Q3ZCU0 254 aa13.77□□□□□ -0.21
CCDC40-201ENST00000269318 OR1S2Q8NGQ3 325 aa13.77□□□□□ -0.21
CCDC40-201ENST00000269318 HSD17B10Q99714 261 aaKnown RBP13.77□□□□□ -0.21
CCDC40-201ENST00000269318 LPAR3Q9UBY5 353 aa13.77□□□□□ -0.21
CCDC40-201ENST00000269318 MMP24Q9Y5R2 645 aa13.77□□□□□ -0.21
CCDC40-201ENST00000269318 KALRNO60229 2985 aa13.77□□□□□ -0.21
CCDC40-201ENST00000269318 KBTBD11-OT1A0A1B0GTJ5 212 aa13.76□□□□□ -0.21
CCDC40-201ENST00000269318 LINC00473A8K010 186 aa13.76□□□□□ -0.21
CCDC40-201ENST00000269318 TMEM178BH3BS89 294 aa13.76□□□□□ -0.21
CCDC40-201ENST00000269318 SHOXO15266 292 aa13.76□□□□□ -0.21
CCDC40-201ENST00000269318 APOBEC3AP31941 199 aaPredicted RBP13.76□□□□□ -0.21
CCDC40-201ENST00000269318 ZNF134P52741 427 aa13.76□□□□□ -0.21
CCDC40-201ENST00000269318 OR2B11Q5JQS5 317 aa13.76□□□□□ -0.21
CCDC40-201ENST00000269318 SPAG16Q8N0X2 631 aa13.76□□□□□ -0.21
CCDC40-201ENST00000269318 TCTEX1D2Q8WW35 142 aa13.76□□□□□ -0.21
CCDC40-201ENST00000269318 GINS3Q9BRX5 216 aa13.76□□□□□ -0.21
CCDC40-201ENST00000269318 SLC25A31Q9H0C2 315 aa13.76□□□□□ -0.21
CCDC40-201ENST00000269318 LINC00574Q9H8X3 128 aa13.76□□□□□ -0.21
CCDC40-201ENST00000269318 COA4Q9NYJ1 87 aa13.76□□□□□ -0.21
CCDC40-201ENST00000269318 CLN8Q9UBY8 286 aa13.76□□□□□ -0.21
CCDC40-201ENST00000269318 SESN1Q9Y6P5 492 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 207.8 ms