RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 ZDHHC8Q9ULC8 765 aa14.34□□□□□ -0.11
PHRF1-201ENST00000264555 ABLIM2Q6H8Q1 611 aa14.34□□□□□ -0.11
PHRF1-201ENST00000264555 FGFRL1Q8N441 504 aa14.34□□□□□ -0.11
PHRF1-201ENST00000264555 CCL13Q99616 98 aa14.34□□□□□ -0.11
PHRF1-201ENST00000264555 MESP1Q9BRJ9 268 aa14.34□□□□□ -0.11
PHRF1-201ENST00000264555 FAM103A1Q9BTL3 118 aaKnown RBP14.34□□□□□ -0.11
PHRF1-201ENST00000264555 FAM78BQ5VT40 261 aa14.33□□□□□ -0.11
PHRF1-201ENST00000264555 ZNF818PQ6ZRF7 136 aa14.33□□□□□ -0.11
PHRF1-201ENST00000264555 OR10A7Q8NGE5 316 aa14.33□□□□□ -0.11
PHRF1-201ENST00000264555 CLCF1Q9UBD9 225 aa14.33□□□□□ -0.11
PHRF1-201ENST00000264555 A0A1W2PPE3 182 aa14.33□□□□□ -0.12
PHRF1-201ENST00000264555 J3QR06 171 aa14.33□□□□□ -0.12
PHRF1-201ENST00000264555 K7N7A8 449 aa14.33□□□□□ -0.12
PHRF1-201ENST00000264555 CEBPDP49716 269 aaPredicted RBP14.33□□□□□ -0.12
PHRF1-201ENST00000264555 B2MP61769 119 aa14.33□□□□□ -0.12
PHRF1-201ENST00000264555 LAMTOR1Q6IAA8 161 aa14.33□□□□□ -0.12
PHRF1-201ENST00000264555 OR1L8Q8NGR8 309 aa14.33□□□□□ -0.12
PHRF1-201ENST00000264555 LHFPL5Q8TAF8 219 aa14.33□□□□□ -0.12
PHRF1-201ENST00000264555 BCL2L2Q92843 193 aaPredicted RBP14.33□□□□□ -0.12
PHRF1-201ENST00000264555 RP1P56715 2156 aa14.33□□□□□ -0.12
PHRF1-201ENST00000264555 COL4A6Q14031 1691 aa14.33□□□□□ -0.12
PHRF1-201ENST00000264555 PDE6DO43924 150 aa14.33□□□□□ -0.12
PHRF1-201ENST00000264555 CCL1P22362 96 aa14.33□□□□□ -0.12
PHRF1-201ENST00000264555 UBE2L3P68036 154 aaKnown RBP14.33□□□□□ -0.12
PHRF1-201ENST00000264555 GFI1Q99684 422 aa14.33□□□□□ -0.12
PHRF1-201ENST00000264555 BARX1Q9HBU1 254 aaPredicted RBP14.33□□□□□ -0.12
PHRF1-201ENST00000264555 FAM90A26D6RGX4 464 aa14.33□□□□□ -0.12
PHRF1-201ENST00000264555 PTGDSP41222 190 aa14.33□□□□□ -0.12
PHRF1-201ENST00000264555 TMEM105Q8N8V8 129 aa14.33□□□□□ -0.12
PHRF1-201ENST00000264555 HEATR5BQ9P2D3 2071 aa14.32□□□□□ -0.12
PHRF1-201ENST00000264555 H0Y8G0 127 aa14.32□□□□□ -0.12
PHRF1-201ENST00000264555 GYPAP02724 150 aa14.32□□□□□ -0.12
PHRF1-201ENST00000264555 ORM2P19652 201 aa14.32□□□□□ -0.12
PHRF1-201ENST00000264555 CD1BP29016 333 aa14.32□□□□□ -0.12
PHRF1-201ENST00000264555 TPPP2P59282 170 aa14.32□□□□□ -0.12
PHRF1-201ENST00000264555 OR4P4Q8NGL7 312 aa14.32□□□□□ -0.12
PHRF1-201ENST00000264555 OR51B2Q9Y5P1 312 aa14.32□□□□□ -0.12
PHRF1-201ENST00000264555 INSIG2Q9Y5U4 225 aa14.32□□□□□ -0.12
PHRF1-201ENST00000264555 ODAMA1E959 279 aa14.32□□□□□ -0.12
PHRF1-201ENST00000264555 CDK2AP1O14519 115 aa14.32□□□□□ -0.12
PHRF1-201ENST00000264555 PAGE4O60829 102 aa14.32□□□□□ -0.12
PHRF1-201ENST00000264555 FABP4P15090 132 aa14.32□□□□□ -0.12
PHRF1-201ENST00000264555 MARVELD3Q96A59 401 aa14.32□□□□□ -0.12
PHRF1-201ENST00000264555 REPIN1Q9BWE0 567 aaKnown RBP14.32□□□□□ -0.12
PHRF1-201ENST00000264555 SEMA5BQ9P283 1151 aa14.32□□□□□ -0.12
PHRF1-201ENST00000264555 TUBD1Q9UJT1 453 aa14.32□□□□□ -0.12
PHRF1-201ENST00000264555 DBX1A6NMT0 343 aa14.32□□□□□ -0.12
PHRF1-201ENST00000264555 NAT2P11245 290 aa14.32□□□□□ -0.12
PHRF1-201ENST00000264555 SFXN3Q9BWM7 321 aa14.32□□□□□ -0.12
PHRF1-201ENST00000264555 SERTM2A0A1B0GWG4 89 aa14.31□□□□□ -0.12
PHRF1-201ENST00000264555 KLK2P20151 261 aa14.31□□□□□ -0.12
PHRF1-201ENST00000264555 SPCS3P61009 180 aa14.31□□□□□ -0.12
PHRF1-201ENST00000264555 PAX5Q02548 391 aa14.31□□□□□ -0.12
PHRF1-201ENST00000264555 OR2T10Q8NGZ9 312 aa14.31□□□□□ -0.12
PHRF1-201ENST00000264555 ZNF714Q96N38 554 aa14.31□□□□□ -0.12
PHRF1-201ENST00000264555 AP4M1O00189 453 aa14.31□□□□□ -0.12
PHRF1-201ENST00000264555 CXorf1O96002 111 aa14.31□□□□□ -0.12
PHRF1-201ENST00000264555 OR5I1Q13606 314 aa14.31□□□□□ -0.12
PHRF1-201ENST00000264555 PSG5Q15238 335 aa14.31□□□□□ -0.12
PHRF1-201ENST00000264555 LSM10Q969L4 123 aaKnown RBP14.31□□□□□ -0.12
PHRF1-201ENST00000264555 NPAS1Q99742 590 aa14.31□□□□□ -0.12
PHRF1-201ENST00000264555 MYLKQ15746 1914 aa14.31□□□□□ -0.12
PHRF1-201ENST00000264555 TCF20Q9UGU0 1960 aaKnown RBP14.31□□□□□ -0.12
PHRF1-201ENST00000264555 CCL21O00585 134 aa14.31□□□□□ -0.12
PHRF1-201ENST00000264555 RPEL1Q2QD12 228 aa14.31□□□□□ -0.12
PHRF1-201ENST00000264555 BLNKQ8WV28 456 aa14.31□□□□□ -0.12
PHRF1-201ENST00000264555 HEXA-AS1Q9H8Q6 139 aa14.31□□□□□ -0.12
PHRF1-201ENST00000264555 MRPL30Q8TCC3 161 aaKnown RBP14.31□□□□□ -0.12
PHRF1-201ENST00000264555 GPHA2Q96T91 129 aa14.31□□□□□ -0.12
PHRF1-201ENST00000264555 BCL2P10415 239 aa14.31□□□□□ -0.12
PHRF1-201ENST00000264555 ZNF785A8K8V0 405 aa14.3□□□□□ -0.12
PHRF1-201ENST00000264555 C9orf172C9J069 976 aa14.3□□□□□ -0.12
PHRF1-201ENST00000264555 GUCA2BQ16661 112 aa14.3□□□□□ -0.12
PHRF1-201ENST00000264555 OR10D4PQ8NGN7 298 aa14.3□□□□□ -0.12
PHRF1-201ENST00000264555 NAT8BQ9UHF3 227 aa14.3□□□□□ -0.12
PHRF1-201ENST00000264555 EFNA2O43921 213 aa14.3□□□□□ -0.12
PHRF1-201ENST00000264555 WDR61Q9GZS3 305 aaKnown RBP14.3□□□□□ -0.12
PHRF1-201ENST00000264555 RBKSQ9H477 322 aa14.3□□□□□ -0.12
PHRF1-201ENST00000264555 C1QL1O75973 258 aa14.3□□□□□ -0.12
PHRF1-201ENST00000264555 LHX2P50458 406 aa14.3□□□□□ -0.12
PHRF1-201ENST00000264555 C2orf68Q2NKX9 166 aa14.3□□□□□ -0.12
PHRF1-201ENST00000264555 CALHM1Q8IU99 346 aa14.3□□□□□ -0.12
PHRF1-201ENST00000264555 OR1B1Q8NGR6 318 aa14.3□□□□□ -0.12
PHRF1-201ENST00000264555 SLC24A4Q8NFF2 622 aa14.3□□□□□ -0.12
PHRF1-201ENST00000264555 RTBDNQ9BSG5 229 aaPredicted RBP14.3□□□□□ -0.12
PHRF1-201ENST00000264555 RSG1Q9BU20 258 aa14.3□□□□□ -0.12
PHRF1-201ENST00000264555 NPVFQ9HCQ7 196 aa14.3□□□□□ -0.12
PHRF1-201ENST00000264555 TNFSF10P50591 281 aa14.29□□□□□ -0.12
PHRF1-201ENST00000264555 CLDN18P56856 261 aa14.29□□□□□ -0.12
PHRF1-201ENST00000264555 PDPNQ86YL7 162 aa14.29□□□□□ -0.12
PHRF1-201ENST00000264555 GATCO43716 136 aaKnown RBP14.29□□□□□ -0.12
PHRF1-201ENST00000264555 MPDU1O75352 247 aa14.29□□□□□ -0.12
PHRF1-201ENST00000264555 F12P00748 615 aaPredicted RBP14.29□□□□□ -0.12
PHRF1-201ENST00000264555 CRYBA1P05813 215 aa14.29□□□□□ -0.12
PHRF1-201ENST00000264555 ERVS71-1P61550 626 aa14.29□□□□□ -0.12
PHRF1-201ENST00000264555 OR10S1Q8NGN2 331 aa14.29□□□□□ -0.12
PHRF1-201ENST00000264555 GALNT14Q96FL9 552 aa14.29□□□□□ -0.12
PHRF1-201ENST00000264555 TP53RKQ96S44 253 aa14.29□□□□□ -0.12
PHRF1-201ENST00000264555 SMPD2O60906 423 aa14.29□□□□□ -0.12
PHRF1-201ENST00000264555 LYZP61626 148 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms