RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 PLPPR5Q32ZL2 321 aa13.63□□□□□ -0.23
PRPF40B-201ENST00000261897 PINX1Q96BK5 328 aaKnown RBP13.63□□□□□ -0.23
PRPF40B-201ENST00000261897 TM2D1Q9BX74 207 aa13.63□□□□□ -0.23
PRPF40B-201ENST00000261897 TP53I11O14683 189 aa13.62□□□□□ -0.23
PRPF40B-201ENST00000261897 CA6P23280 308 aa13.62□□□□□ -0.23
PRPF40B-201ENST00000261897 MSX1P28360 303 aa13.62□□□□□ -0.23
PRPF40B-201ENST00000261897 CDC34P49427 236 aaPredicted RBP13.62□□□□□ -0.23
PRPF40B-201ENST00000261897 UCP2P55851 309 aa13.62□□□□□ -0.23
PRPF40B-201ENST00000261897 SPTBN2O15020 2390 aa13.62□□□□□ -0.23
PRPF40B-201ENST00000261897 RRP8O43159 456 aaKnown RBP13.62□□□□□ -0.23
PRPF40B-201ENST00000261897 FXYD3Q14802 87 aa13.62□□□□□ -0.23
PRPF40B-201ENST00000261897 Q56UQ5 140 aa13.62□□□□□ -0.23
PRPF40B-201ENST00000261897 CADP27708 2225 aa13.62□□□□□ -0.23
PRPF40B-201ENST00000261897 FUT6P51993 359 aa13.62□□□□□ -0.23
PRPF40B-201ENST00000261897 ZP4Q12836 540 aa13.62□□□□□ -0.23
PRPF40B-201ENST00000261897 CDCA3Q99618 268 aaPredicted RBP13.62□□□□□ -0.23
PRPF40B-201ENST00000261897 TMEM106BQ9NUM4 274 aa13.62□□□□□ -0.23
PRPF40B-201ENST00000261897 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.61□□□□□ -0.23
PRPF40B-201ENST00000261897 IGHMP01871 453 aa13.61□□□□□ -0.23
PRPF40B-201ENST00000261897 TNFRSF4P43489 277 aa13.61□□□□□ -0.23
PRPF40B-201ENST00000261897 PLPPR1Q8TBJ4 325 aa13.61□□□□□ -0.23
PRPF40B-201ENST00000261897 C22orf15Q8WYQ4 148 aa13.61□□□□□ -0.23
PRPF40B-201ENST00000261897 NINJ1Q92982 152 aa13.61□□□□□ -0.23
PRPF40B-201ENST00000261897 CDH20Q9HBT6 801 aa13.61□□□□□ -0.23
PRPF40B-201ENST00000261897 IGHV3-43A0A0B4J1X8 118 aa13.61□□□□□ -0.23
PRPF40B-201ENST00000261897 LILRA1O75019 489 aa13.61□□□□□ -0.23
PRPF40B-201ENST00000261897 IGHV3-43DP0DP04 118 aa13.61□□□□□ -0.23
PRPF40B-201ENST00000261897 RND2P52198 227 aa13.61□□□□□ -0.23
PRPF40B-201ENST00000261897 KIAA0895LQ68EN5 471 aa13.61□□□□□ -0.23
PRPF40B-201ENST00000261897 ZNF525Q8N782 197 aa13.61□□□□□ -0.23
PRPF40B-201ENST00000261897 ZDHHC16Q969W1 377 aa13.61□□□□□ -0.23
PRPF40B-201ENST00000261897 TAAR3PQ9P1P4 343 aa13.61□□□□□ -0.23
PRPF40B-201ENST00000261897 NBEAQ8NFP9 2946 aa13.61□□□□□ -0.23
PRPF40B-201ENST00000261897 ID3Q02535 119 aa13.6□□□□□ -0.23
PRPF40B-201ENST00000261897 ASPHD1Q5U4P2 390 aa13.6□□□□□ -0.23
PRPF40B-201ENST00000261897 CXorf67Q86X51 503 aaPredicted RBP13.6□□□□□ -0.23
PRPF40B-201ENST00000261897 CISD2Q8N5K1 135 aaKnown RBP13.6□□□□□ -0.23
PRPF40B-201ENST00000261897 MIEN1Q9BRT3 115 aa13.6□□□□□ -0.23
PRPF40B-201ENST00000261897 MRPL18Q9H0U6 180 aaKnown RBP13.6□□□□□ -0.23
PRPF40B-201ENST00000261897 PNRC2Q9NPJ4 139 aaKnown RBP13.6□□□□□ -0.23
PRPF40B-201ENST00000261897 HEYLQ9NQ87 328 aaPredicted RBP13.6□□□□□ -0.23
PRPF40B-201ENST00000261897 A8MXE2 369 aa13.6□□□□□ -0.23
PRPF40B-201ENST00000261897 F2Z2F3 143 aa13.6□□□□□ -0.23
PRPF40B-201ENST00000261897 SYNGR1O43759 233 aa13.6□□□□□ -0.23
PRPF40B-201ENST00000261897 SCRG1O75711 98 aa13.6□□□□□ -0.23
PRPF40B-201ENST00000261897 ACSM6Q6P461 480 aa13.6□□□□□ -0.23
PRPF40B-201ENST00000261897 OR10G8Q8NGN5 311 aa13.6□□□□□ -0.23
PRPF40B-201ENST00000261897 FRYQ5TBA9 3013 aa13.6□□□□□ -0.23
PRPF40B-201ENST00000261897 CBR3O75828 277 aa13.6□□□□□ -0.23
PRPF40B-201ENST00000261897 CEACAM6P40199 344 aa13.6□□□□□ -0.23
PRPF40B-201ENST00000261897 DCAF10Q5QP82 559 aa13.6□□□□□ -0.23
PRPF40B-201ENST00000261897 OR8I2Q8N0Y5 310 aa13.6□□□□□ -0.23
PRPF40B-201ENST00000261897 RNASE8Q8TDE3 154 aaKnown RBP13.6□□□□□ -0.23
PRPF40B-201ENST00000261897 ASCL3Q9NQ33 180 aa13.6□□□□□ -0.23
PRPF40B-201ENST00000261897 RPH3ALQ9UNE2 315 aa13.6□□□□□ -0.23
PRPF40B-201ENST00000261897 ARL2-SNX15V9GYD0 113 aa13.6□□□□□ -0.23
PRPF40B-201ENST00000261897 DEGS1O15121 323 aa13.59□□□□□ -0.23
PRPF40B-201ENST00000261897 IGKV1D-33P01593 117 aa13.59□□□□□ -0.23
PRPF40B-201ENST00000261897 IGKV1-33P01594 117 aa13.59□□□□□ -0.23
PRPF40B-201ENST00000261897 IGHV4-34P06331 123 aa13.59□□□□□ -0.23
PRPF40B-201ENST00000261897 RAC2P15153 192 aa13.59□□□□□ -0.23
PRPF40B-201ENST00000261897 BRS3P32247 399 aa13.59□□□□□ -0.23
PRPF40B-201ENST00000261897 LEMD1Q68G75 181 aa13.59□□□□□ -0.23
PRPF40B-201ENST00000261897 PRR27Q6MZM9 219 aa13.59□□□□□ -0.23
PRPF40B-201ENST00000261897 ZNF573Q86YE8 665 aa13.59□□□□□ -0.23
PRPF40B-201ENST00000261897 R3HDM4Q96D70 268 aa13.59□□□□□ -0.23
PRPF40B-201ENST00000261897 SH2D1BO14796 132 aa13.59□□□□□ -0.23
PRPF40B-201ENST00000261897 LCN12Q6JVE5 192 aa13.59□□□□□ -0.23
PRPF40B-201ENST00000261897 CPEB3Q8NE35 698 aaKnown RBP13.59□□□□□ -0.23
PRPF40B-201ENST00000261897 ANAPC16Q96DE5 110 aa13.59□□□□□ -0.23
PRPF40B-201ENST00000261897 SLC35E1Q96K37 410 aa13.59□□□□□ -0.23
PRPF40B-201ENST00000261897 WDR61Q9GZS3 305 aaKnown RBP13.59□□□□□ -0.23
PRPF40B-201ENST00000261897 A0A1B0GW64 132 aa13.59□□□□□ -0.23
PRPF40B-201ENST00000261897 GRPP07492 148 aa13.59□□□□□ -0.23
PRPF40B-201ENST00000261897 MAS1LP35410 378 aa13.59□□□□□ -0.23
PRPF40B-201ENST00000261897 PRDX4Q13162 271 aa13.59□□□□□ -0.23
PRPF40B-201ENST00000261897 PLEKHA3Q9HB20 300 aa13.59□□□□□ -0.23
PRPF40B-201ENST00000261897 A0A0U1RQV5 110 aa13.58□□□□□ -0.23
PRPF40B-201ENST00000261897 RPL36A-HNRNPH2H7BZ11 118 aa13.58□□□□□ -0.23
PRPF40B-201ENST00000261897 GDF9O60383 454 aa13.58□□□□□ -0.23
PRPF40B-201ENST00000261897 IGHEP01854 428 aa13.58□□□□□ -0.23
PRPF40B-201ENST00000261897 SIGLEC12Q96PQ1 595 aa13.58□□□□□ -0.23
PRPF40B-201ENST00000261897 UHRF2Q96PU4 802 aa13.58□□□□□ -0.23
PRPF40B-201ENST00000261897 PARD6GQ9BYG4 376 aaPredicted RBP13.58□□□□□ -0.23
PRPF40B-201ENST00000261897 AKIRIN1Q9H9L7 192 aaPredicted RBP13.58□□□□□ -0.23
PRPF40B-201ENST00000261897 CTXND1A0A1B0GTU2 59 aa13.58□□□□□ -0.24
PRPF40B-201ENST00000261897 PAX9P55771 341 aa13.58□□□□□ -0.24
PRPF40B-201ENST00000261897 ANAPC10Q9UM13 185 aa13.58□□□□□ -0.24
PRPF40B-201ENST00000261897 WNK2Q9Y3S1 2297 aa13.58□□□□□ -0.24
PRPF40B-201ENST00000261897 RAB29O14966 203 aa13.58□□□□□ -0.24
PRPF40B-201ENST00000261897 ZG16O60844 167 aa13.58□□□□□ -0.24
PRPF40B-201ENST00000261897 TMEM211Q6ICI0 200 aa13.58□□□□□ -0.24
PRPF40B-201ENST00000261897 TPRX1Q8N7U7 411 aa13.58□□□□□ -0.24
PRPF40B-201ENST00000261897 NHLRC2Q8NBF2 726 aa13.58□□□□□ -0.24
PRPF40B-201ENST00000261897 OBSL1O75147 1896 aa13.57□□□□□ -0.24
PRPF40B-201ENST00000261897 ZFP36L1Q07352 338 aaKnown RBP13.57□□□□□ -0.24
PRPF40B-201ENST00000261897 TMEM240Q5SV17 173 aa13.57□□□□□ -0.24
PRPF40B-201ENST00000261897 Q6ZWC4 215 aa13.57□□□□□ -0.24
PRPF40B-201ENST00000261897 H2BFWTQ7Z2G1 175 aa13.57□□□□□ -0.24
PRPF40B-201ENST00000261897 FOXB1Q99853 325 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms