RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 ZADH2Q8N4Q0 377 aa11.95□□□□□ -0.5
HCFC2-201ENST00000229330 OR1B1Q8NGR6 318 aa11.95□□□□□ -0.5
HCFC2-201ENST00000229330 KCNK17Q96T54 332 aa11.95□□□□□ -0.5
HCFC2-201ENST00000229330 SARGQ9BW04 601 aa11.95□□□□□ -0.5
HCFC2-201ENST00000229330 RPRMQ9NS64 109 aa11.95□□□□□ -0.5
HCFC2-201ENST00000229330 IL36GQ9NZH8 169 aa11.95□□□□□ -0.5
HCFC2-201ENST00000229330 TNFSF10P50591 281 aa11.95□□□□□ -0.5
HCFC2-201ENST00000229330 ZNF766Q5HY98 468 aa11.95□□□□□ -0.5
HCFC2-201ENST00000229330 CYP2G1PQ6ZSU1 146 aa11.95□□□□□ -0.5
HCFC2-201ENST00000229330 C5orf17Q8NAS9 161 aa11.95□□□□□ -0.5
HCFC2-201ENST00000229330 OR4X1Q8NH49 305 aa11.95□□□□□ -0.5
HCFC2-201ENST00000229330 RNF122Q9H9V4 155 aa11.95□□□□□ -0.5
HCFC2-201ENST00000229330 IGKV1D-42A0A075B6H8 117 aa11.95□□□□□ -0.5
HCFC2-201ENST00000229330 TNFSF15O95150 251 aa11.95□□□□□ -0.5
HCFC2-201ENST00000229330 SNRPCP09234 159 aaKnown RBP11.95□□□□□ -0.5
HCFC2-201ENST00000229330 SPINK2P20155 84 aa11.95□□□□□ -0.5
HCFC2-201ENST00000229330 WDYHV1Q96HA8 205 aa11.95□□□□□ -0.5
HCFC2-201ENST00000229330 ALKBH7Q9BT30 221 aaPredicted RBP11.95□□□□□ -0.5
HCFC2-201ENST00000229330 ABHD14AQ9BUJ0 271 aa11.95□□□□□ -0.5
HCFC2-201ENST00000229330 TRPM6Q9BX84 2022 aa11.95□□□□□ -0.5
HCFC2-201ENST00000229330 SHISA7A6NL88 538 aa11.95□□□□□ -0.5
HCFC2-201ENST00000229330 UCP3P55916 312 aa11.95□□□□□ -0.5
HCFC2-201ENST00000229330 UNC119Q13432 240 aa11.95□□□□□ -0.5
HCFC2-201ENST00000229330 KIAA1644Q3SXP7 199 aa11.95□□□□□ -0.5
HCFC2-201ENST00000229330 OR8B3Q8NGG8 313 aa11.95□□□□□ -0.5
HCFC2-201ENST00000229330 OR5A2Q8NGI9 324 aa11.95□□□□□ -0.5
HCFC2-201ENST00000229330 RTBDNQ9BSG5 229 aaPredicted RBP11.95□□□□□ -0.5
HCFC2-201ENST00000229330 SDF2L1Q9HCN8 221 aa11.95□□□□□ -0.5
HCFC2-201ENST00000229330 NPVFQ9HCQ7 196 aa11.95□□□□□ -0.5
HCFC2-201ENST00000229330 A0A1W2PN81 502 aa11.94□□□□□ -0.5
HCFC2-201ENST00000229330 NPIPB7O75200 414 aa11.94□□□□□ -0.5
HCFC2-201ENST00000229330 CD5P06127 495 aa11.94□□□□□ -0.5
HCFC2-201ENST00000229330 C9orf40Q8IXQ3 194 aa11.94□□□□□ -0.5
HCFC2-201ENST00000229330 OR2Z1Q8NG97 314 aa11.94□□□□□ -0.5
HCFC2-201ENST00000229330 IL36RNQ9UBH0 155 aa11.94□□□□□ -0.5
HCFC2-201ENST00000229330 J3QT63 122 aa11.94□□□□□ -0.5
HCFC2-201ENST00000229330 IGHV3-13P01766 116 aa11.94□□□□□ -0.5
HCFC2-201ENST00000229330 IGHV3-7P01780 117 aa11.94□□□□□ -0.5
HCFC2-201ENST00000229330 TFF2Q03403 129 aa11.94□□□□□ -0.5
HCFC2-201ENST00000229330 C10orf113Q5VZT2 155 aa11.94□□□□□ -0.5
HCFC2-201ENST00000229330 SMRP1Q8NCR6 262 aa11.94□□□□□ -0.5
HCFC2-201ENST00000229330 CLDND2Q8NHS1 167 aa11.94□□□□□ -0.5
HCFC2-201ENST00000229330 PCOLCE2Q9UKZ9 415 aa11.94□□□□□ -0.5
HCFC2-201ENST00000229330 TRAV38-1A0A0B4J264 116 aa11.94□□□□□ -0.5
HCFC2-201ENST00000229330 IFI6P09912 130 aa11.94□□□□□ -0.5
HCFC2-201ENST00000229330 CBLN1P23435 193 aa11.94□□□□□ -0.5
HCFC2-201ENST00000229330 FHL5Q5TD97 284 aa11.94□□□□□ -0.5
HCFC2-201ENST00000229330 HIST3H2BBQ8N257 126 aa11.94□□□□□ -0.5
HCFC2-201ENST00000229330 RCC1LQ96I51 464 aaKnown RBP11.94□□□□□ -0.5
HCFC2-201ENST00000229330 RP1L1Q8IWN7 2480 aaPredicted RBP11.94□□□□□ -0.5
HCFC2-201ENST00000229330 GAS1P54826 345 aa11.93□□□□□ -0.5
HCFC2-201ENST00000229330 MESP2Q0VG99 397 aa11.93□□□□□ -0.5
HCFC2-201ENST00000229330 ALKBH6Q3KRA9 238 aa11.93□□□□□ -0.5
HCFC2-201ENST00000229330 SAPCD1Q5SSQ6 148 aa11.93□□□□□ -0.5
HCFC2-201ENST00000229330 C1QL4Q86Z23 238 aa11.93□□□□□ -0.5
HCFC2-201ENST00000229330 MMD2Q8IY49 270 aa11.93□□□□□ -0.5
HCFC2-201ENST00000229330 M0R1B8 84 aa11.93□□□□□ -0.5
HCFC2-201ENST00000229330 FOXS1O43638 330 aa11.93□□□□□ -0.5
HCFC2-201ENST00000229330 SRD5A2P31213 254 aa11.93□□□□□ -0.5
HCFC2-201ENST00000229330 Q96M66 194 aa11.93□□□□□ -0.5
HCFC2-201ENST00000229330 HIST1H2BLQ99880 126 aa11.93□□□□□ -0.5
HCFC2-201ENST00000229330 PEF1Q9UBV8 284 aaKnown RBP11.93□□□□□ -0.5
HCFC2-201ENST00000229330 RBBP6Q7Z6E9 1792 aaKnown RBP11.93□□□□□ -0.5
HCFC2-201ENST00000229330 GPX4P36969 197 aaPredicted RBP11.93□□□□□ -0.5
HCFC2-201ENST00000229330 PSMB2P49721 201 aa11.93□□□□□ -0.5
HCFC2-201ENST00000229330 NUTF2P61970 127 aaKnown RBP11.93□□□□□ -0.5
HCFC2-201ENST00000229330 SCGB1D4Q6XE38 83 aa11.93□□□□□ -0.5
HCFC2-201ENST00000229330 LRRC29Q8WV35 223 aa11.93□□□□□ -0.5
HCFC2-201ENST00000229330 PROCRQ9UNN8 238 aa11.93□□□□□ -0.5
HCFC2-201ENST00000229330 FAM90A26D6RGX4 464 aa11.93□□□□□ -0.5
HCFC2-201ENST00000229330 H0YIZ8 118 aa11.93□□□□□ -0.5
HCFC2-201ENST00000229330 RNPS1Q15287 305 aaKnown RBP11.93□□□□□ -0.5
HCFC2-201ENST00000229330 OR52L2PQ8NGH6 319 aa11.93□□□□□ -0.5
HCFC2-201ENST00000229330 FLYWCH2Q96CP2 140 aaKnown RBP11.93□□□□□ -0.5
HCFC2-201ENST00000229330 A8MWL6 223 aa11.93□□□□□ -0.5
HCFC2-201ENST00000229330 MRPS11P82912 194 aaKnown RBP11.93□□□□□ -0.5
HCFC2-201ENST00000229330 PARP14Q460N5 1801 aa11.93□□□□□ -0.5
HCFC2-201ENST00000229330 ZNF721Q8TF20 911 aa11.93□□□□□ -0.5
HCFC2-201ENST00000229330 RAB37Q96AX2 223 aa11.93□□□□□ -0.5
HCFC2-201ENST00000229330 TMEM45BQ96B21 275 aa11.93□□□□□ -0.5
HCFC2-201ENST00000229330 ZPBPQ9BS86 351 aa11.93□□□□□ -0.5
HCFC2-201ENST00000229330 FAM117AQ9C073 453 aa11.93□□□□□ -0.5
HCFC2-201ENST00000229330 J3QRE1 110 aa11.92□□□□□ -0.5
HCFC2-201ENST00000229330 S100A4P26447 101 aaKnown RBP11.92□□□□□ -0.5
HCFC2-201ENST00000229330 TCTAP57738 103 aa11.92□□□□□ -0.5
HCFC2-201ENST00000229330 RELBQ01201 579 aa11.92□□□□□ -0.5
HCFC2-201ENST00000229330 STXBP6Q8NFX7 210 aa11.92□□□□□ -0.5
HCFC2-201ENST00000229330 GPHA2Q96T91 129 aa11.92□□□□□ -0.5
HCFC2-201ENST00000229330 CEP290O15078 2479 aa11.92□□□□□ -0.5
HCFC2-201ENST00000229330 BTF3P20290 206 aaKnown RBP11.92□□□□□ -0.5
HCFC2-201ENST00000229330 OTX1P32242 354 aaPredicted RBP11.92□□□□□ -0.5
HCFC2-201ENST00000229330 RTP5Q14D33 572 aa11.92□□□□□ -0.5
HCFC2-201ENST00000229330 PQLC2Q6ZP29 291 aa11.92□□□□□ -0.5
HCFC2-201ENST00000229330 NIT1Q86X76 327 aa11.92□□□□□ -0.5
HCFC2-201ENST00000229330 ATP23Q9Y6H3 246 aa11.92□□□□□ -0.5
HCFC2-201ENST00000229330 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.92□□□□□ -0.5
HCFC2-201ENST00000229330 OR2T8A6NH00 312 aa11.92□□□□□ -0.5
HCFC2-201ENST00000229330 SMIM17P0DL12 118 aa11.92□□□□□ -0.5
HCFC2-201ENST00000229330 EPHA8P29322 1005 aaPredicted RBP11.92□□□□□ -0.5
HCFC2-201ENST00000229330 SLC35E4Q6ICL7 350 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms