RNA–Protein interactions for RNA: ENST00000637769.1

CACNA1A-247, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-247ENST00000637769 SOX21Q9Y651 276 aaPredicted RBP15.85■□□□□ 0.13
CACNA1A-247ENST00000637769 LIPFP07098 398 aa15.85■□□□□ 0.13
CACNA1A-247ENST00000637769 PRDX2P32119 198 aa15.85■□□□□ 0.13
CACNA1A-247ENST00000637769 SPINK9Q5DT21 86 aa15.85■□□□□ 0.13
CACNA1A-247ENST00000637769 ZNF441Q8N8Z8 693 aa15.84■□□□□ 0.13
CACNA1A-247ENST00000637769 IL4P05112 153 aa15.84■□□□□ 0.13
CACNA1A-247ENST00000637769 WIPI1Q5MNZ9 446 aaPredicted RBP15.84■□□□□ 0.13
CACNA1A-247ENST00000637769 SAMD13Q5VXD3 122 aa15.84■□□□□ 0.13
CACNA1A-247ENST00000637769 WFDC5Q8TCV5 224 aa15.84■□□□□ 0.13
CACNA1A-247ENST00000637769 WNT16Q9UBV4 365 aa15.84■□□□□ 0.13
CACNA1A-247ENST00000637769 PRSS2P07478 247 aa15.84■□□□□ 0.13
CACNA1A-247ENST00000637769 INO80CQ6PI98 192 aaPredicted RBP15.84■□□□□ 0.13
CACNA1A-247ENST00000637769 PQLC2Q6ZP29 291 aa15.84■□□□□ 0.13
CACNA1A-247ENST00000637769 FAM90A27PA6NNH2 459 aa15.84■□□□□ 0.13
CACNA1A-247ENST00000637769 GAPDHP04406 335 aaKnown RBP15.84■□□□□ 0.13
CACNA1A-247ENST00000637769 HOXD4P09016 255 aaPredicted RBP15.84■□□□□ 0.13
CACNA1A-247ENST00000637769 KCNE5Q9UJ90 142 aa15.84■□□□□ 0.13
CACNA1A-247ENST00000637769 ISXQ2M1V0 245 aa15.84■□□□□ 0.13
CACNA1A-247ENST00000637769 APOBEC4Q8WW27 367 aaKnown RBP15.84■□□□□ 0.13
CACNA1A-247ENST00000637769 IBA57Q5T440 356 aaKnown RBP15.84■□□□□ 0.13
CACNA1A-247ENST00000637769 Q6ZNB5 142 aa15.84■□□□□ 0.13
CACNA1A-247ENST00000637769 LEUTXA8MZ59 168 aa15.84■□□□□ 0.13
CACNA1A-247ENST00000637769 HPRT1P00492 218 aa15.84■□□□□ 0.13
CACNA1A-247ENST00000637769 TCF23Q7RTU1 214 aa15.84■□□□□ 0.13
CACNA1A-247ENST00000637769 SHISA5Q8N114 240 aa15.84■□□□□ 0.13
CACNA1A-247ENST00000637769 HSPB7Q9UBY9 170 aa15.84■□□□□ 0.13
CACNA1A-247ENST00000637769 SLC25A34Q6PIV7 304 aa15.83■□□□□ 0.13
CACNA1A-247ENST00000637769 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.83■□□□□ 0.13
CACNA1A-247ENST00000637769 FZR1Q9UM11 496 aa15.83■□□□□ 0.13
CACNA1A-247ENST00000637769 MEF2BQ02080 365 aaPredicted RBP15.83■□□□□ 0.13
CACNA1A-247ENST00000637769 NHSQ6T4R5 1651 aa15.83■□□□□ 0.12
CACNA1A-247ENST00000637769 TRAV30A0A087WSZ9 112 aa15.83■□□□□ 0.12
CACNA1A-247ENST00000637769 SPNP16150 400 aa15.83■□□□□ 0.12
CACNA1A-247ENST00000637769 TMEM30BQ3MIR4 351 aa15.83■□□□□ 0.12
CACNA1A-247ENST00000637769 MRGPRFQ96AM1 343 aa15.83■□□□□ 0.12
CACNA1A-247ENST00000637769 H7C1H1 209 aa15.83■□□□□ 0.12
CACNA1A-247ENST00000637769 FGF5P12034 268 aa15.83■□□□□ 0.12
CACNA1A-247ENST00000637769 DAOP14920 347 aa15.83■□□□□ 0.12
CACNA1A-247ENST00000637769 NEUROG1Q92886 237 aa15.83■□□□□ 0.12
CACNA1A-247ENST00000637769 FREM1Q5H8C1 2179 aa15.83■□□□□ 0.12
CACNA1A-247ENST00000637769 HMGA2P52926 109 aa15.83■□□□□ 0.12
CACNA1A-247ENST00000637769 CLEC18BQ6UXF7 455 aa15.83■□□□□ 0.12
CACNA1A-247ENST00000637769 GAPTQ8N292 157 aa15.83■□□□□ 0.12
CACNA1A-247ENST00000637769 GPA33Q99795 319 aa15.83■□□□□ 0.12
CACNA1A-247ENST00000637769 A0A1W2PQD3 144 aa15.83■□□□□ 0.12
CACNA1A-247ENST00000637769 SLC23A3Q6PIS1 610 aa15.83■□□□□ 0.12
CACNA1A-247ENST00000637769 TMEM45BQ96B21 275 aa15.82■□□□□ 0.12
CACNA1A-247ENST00000637769 TMEM250H0YL14 139 aa15.82■□□□□ 0.12
CACNA1A-247ENST00000637769 OR10AC1Q8NH08 325 aa15.82■□□□□ 0.12
CACNA1A-247ENST00000637769 AMY1AP04745 511 aa15.82■□□□□ 0.12
CACNA1A-247ENST00000637769 DLX6P56179 175 aa15.82■□□□□ 0.12
CACNA1A-247ENST00000637769 PLPPR2Q96GM1 343 aa15.82■□□□□ 0.12
CACNA1A-247ENST00000637769 SIPA1L3O60292 1781 aaPredicted RBP15.82■□□□□ 0.12
CACNA1A-247ENST00000637769 SLC16A13Q7RTY0 426 aa15.82■□□□□ 0.12
CACNA1A-247ENST00000637769 ANKRD37Q7Z713 158 aa15.82■□□□□ 0.12
CACNA1A-247ENST00000637769 LPAR2Q9HBW0 351 aa15.82■□□□□ 0.12
CACNA1A-247ENST00000637769 EML6Q6ZMW3 1958 aa15.82■□□□□ 0.12
CACNA1A-247ENST00000637769 TRAF4Q9BUZ4 470 aaPredicted RBP15.82■□□□□ 0.12
CACNA1A-247ENST00000637769 SLC25A10Q9UBX3 287 aaPredicted RBP15.82■□□□□ 0.12
CACNA1A-247ENST00000637769 SOCS7O14512 581 aa15.82■□□□□ 0.12
CACNA1A-247ENST00000637769 SMUG1Q53HV7 270 aa15.82■□□□□ 0.12
CACNA1A-247ENST00000637769 PARD6GQ9BYG4 376 aaPredicted RBP15.82■□□□□ 0.12
CACNA1A-247ENST00000637769 METTL12A8MUP2 240 aa15.82■□□□□ 0.12
CACNA1A-247ENST00000637769 MPLP40238 635 aa15.82■□□□□ 0.12
CACNA1A-247ENST00000637769 ATP5IP56385 69 aaPredicted RBP15.82■□□□□ 0.12
CACNA1A-247ENST00000637769 SNRPD3P62318 126 aaKnown RBP15.82■□□□□ 0.12
CACNA1A-247ENST00000637769 FZD5Q13467 585 aa15.82■□□□□ 0.12
CACNA1A-247ENST00000637769 XAF1Q6GPH4 301 aa15.82■□□□□ 0.12
CACNA1A-247ENST00000637769 CEACAM18A8MTB9 384 aa15.81■□□□□ 0.12
CACNA1A-247ENST00000637769 RECKO95980 971 aa15.81■□□□□ 0.12
CACNA1A-247ENST00000637769 MMP16P51512 607 aa15.81■□□□□ 0.12
CACNA1A-247ENST00000637769 ZNF880Q6PDB4 577 aa15.81■□□□□ 0.12
CACNA1A-247ENST00000637769 ZNF793Q6ZN11 406 aa15.81■□□□□ 0.12
CACNA1A-247ENST00000637769 LHFPL5Q8TAF8 219 aa15.81■□□□□ 0.12
CACNA1A-247ENST00000637769 NPBWR2P48146 333 aa15.81■□□□□ 0.12
CACNA1A-247ENST00000637769 RPL31P62899 125 aaKnown RBP15.81■□□□□ 0.12
CACNA1A-247ENST00000637769 MMDQ15546 238 aa15.81■□□□□ 0.12
CACNA1A-247ENST00000637769 NCMAPQ5T1S8 102 aa15.81■□□□□ 0.12
CACNA1A-247ENST00000637769 PAGE4O60829 102 aa15.81■□□□□ 0.12
CACNA1A-247ENST00000637769 RPS4XP62701 263 aaKnown RBP15.81■□□□□ 0.12
CACNA1A-247ENST00000637769 TMEM50BP56557 158 aa15.81■□□□□ 0.12
CACNA1A-247ENST00000637769 ECSCRQ19T08 205 aa15.81■□□□□ 0.12
CACNA1A-247ENST00000637769 PGLYRP3Q96LB9 341 aa15.81■□□□□ 0.12
CACNA1A-247ENST00000637769 PEF1Q9UBV8 284 aaKnown RBP15.81■□□□□ 0.12
CACNA1A-247ENST00000637769 CTSVO60911 334 aa15.81■□□□□ 0.12
CACNA1A-247ENST00000637769 MNX1P50219 401 aaPredicted RBP15.81■□□□□ 0.12
CACNA1A-247ENST00000637769 H0Y980 276 aa15.8■□□□□ 0.12
CACNA1A-247ENST00000637769 WSB2Q9NYS7 404 aaPredicted RBP15.8■□□□□ 0.12
CACNA1A-247ENST00000637769 BRCA1P38398 1863 aaKnown RBP15.8■□□□□ 0.12
CACNA1A-247ENST00000637769 CD74P04233 296 aa15.8■□□□□ 0.12
CACNA1A-247ENST00000637769 CTLA4P16410 223 aa15.8■□□□□ 0.12
CACNA1A-247ENST00000637769 EWSR1Q01844 656 aaKnown RBP eCLIP15.8■□□□□ 0.12
CACNA1A-247ENST00000637769 GAB4Q2WGN9 574 aa15.8■□□□□ 0.12
CACNA1A-247ENST00000637769 LEMD1Q68G75 181 aa15.8■□□□□ 0.12
CACNA1A-247ENST00000637769 GPR35Q9HC97 309 aa15.8■□□□□ 0.12
CACNA1A-247ENST00000637769 NUDT11Q96G61 164 aa15.8■□□□□ 0.12
CACNA1A-247ENST00000637769 MS4A4AQ96JQ5 239 aa15.8■□□□□ 0.12
CACNA1A-247ENST00000637769 NRXN3Q9Y4C0 1643 aa15.8■□□□□ 0.12
CACNA1A-247ENST00000637769 IGHV3-43A0A0B4J1X8 118 aa15.8■□□□□ 0.12
CACNA1A-247ENST00000637769 IGHV3-43DP0DP04 118 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms