RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 TMEM218A2RU14 115 aa16.51■□□□□ 0.23
PCDHB11-202ENST00000624887 GLIPR1P48060 266 aa16.51■□□□□ 0.23
PCDHB11-202ENST00000624887 FLI1Q01543 452 aaPredicted RBP16.51■□□□□ 0.23
PCDHB11-202ENST00000624887 ZNF585BQ52M93 769 aa16.51■□□□□ 0.23
PCDHB11-202ENST00000624887 CISD2Q8N5K1 135 aaKnown RBP16.51■□□□□ 0.23
PCDHB11-202ENST00000624887 TMEM252Q8N6L7 170 aa16.51■□□□□ 0.23
PCDHB11-202ENST00000624887 ZNF645Q8N7E2 425 aa16.51■□□□□ 0.23
PCDHB11-202ENST00000624887 ZBTB34Q8NCN2 500 aa16.51■□□□□ 0.23
PCDHB11-202ENST00000624887 MRGPRDQ8TDS7 321 aa16.51■□□□□ 0.23
PCDHB11-202ENST00000624887 MEGF10Q96KG7 1140 aa16.51■□□□□ 0.23
PCDHB11-202ENST00000624887 OR2V2Q96R30 315 aa16.51■□□□□ 0.23
PCDHB11-202ENST00000624887 CADP27708 2225 aa16.51■□□□□ 0.23
PCDHB11-202ENST00000624887 RNF212BA8MTL3 300 aa16.51■□□□□ 0.23
PCDHB11-202ENST00000624887 TMEM50AO95807 157 aa16.51■□□□□ 0.23
PCDHB11-202ENST00000624887 TMPRSS3P57727 454 aa16.51■□□□□ 0.23
PCDHB11-202ENST00000624887 RPS23P62266 143 aaKnown RBP16.51■□□□□ 0.23
PCDHB11-202ENST00000624887 VHLLQ6RSH7 139 aa16.51■□□□□ 0.23
PCDHB11-202ENST00000624887 BTNL8Q6UX41 500 aa16.51■□□□□ 0.23
PCDHB11-202ENST00000624887 C22orf34Q6ZV56 151 aa16.51■□□□□ 0.23
PCDHB11-202ENST00000624887 OR52L2PQ8NGH6 319 aa16.51■□□□□ 0.23
PCDHB11-202ENST00000624887 PRELID3BQ9Y3B1 194 aa16.51■□□□□ 0.23
PCDHB11-202ENST00000624887 KIAA1324LA8MWY0 1029 aaPredicted RBP16.5■□□□□ 0.23
PCDHB11-202ENST00000624887 WRBO00258 174 aa16.5■□□□□ 0.23
PCDHB11-202ENST00000624887 CHST1O43916 411 aa16.5■□□□□ 0.23
PCDHB11-202ENST00000624887 ZNF737O75373 536 aa16.5■□□□□ 0.23
PCDHB11-202ENST00000624887 EPHA1P21709 976 aa16.5■□□□□ 0.23
PCDHB11-202ENST00000624887 UCNP55089 124 aa16.5■□□□□ 0.23
PCDHB11-202ENST00000624887 MRGPRGQ86SM5 289 aa16.5■□□□□ 0.23
PCDHB11-202ENST00000624887 GCSAMQ8N6F7 178 aa16.5■□□□□ 0.23
PCDHB11-202ENST00000624887 RAXQ9Y2V3 346 aa16.5■□□□□ 0.23
PCDHB11-202ENST00000624887 DMXL2Q8TDJ6 3036 aa16.49■□□□□ 0.23
PCDHB11-202ENST00000624887 A0A0G2JNJ9 132 aa16.49■□□□□ 0.23
PCDHB11-202ENST00000624887 ZNF16P17020 682 aaPredicted RBP16.49■□□□□ 0.23
PCDHB11-202ENST00000624887 AKR1C2P52895 323 aa16.49■□□□□ 0.23
PCDHB11-202ENST00000624887 F2RL1P55085 397 aa16.49■□□□□ 0.23
PCDHB11-202ENST00000624887 SRSF3P84103 164 aaKnown RBP16.49■□□□□ 0.23
PCDHB11-202ENST00000624887 AKR1C1Q04828 323 aa16.49■□□□□ 0.23
PCDHB11-202ENST00000624887 LINC00518Q8N0U6 118 aa16.49■□□□□ 0.23
PCDHB11-202ENST00000624887 OR13A1Q8NGR1 328 aa16.49■□□□□ 0.23
PCDHB11-202ENST00000624887 RNASE11Q8TAA1 199 aaKnown RBP16.49■□□□□ 0.23
PCDHB11-202ENST00000624887 NINJ1Q92982 152 aa16.49■□□□□ 0.23
PCDHB11-202ENST00000624887 Q9UFV3 132 aa16.49■□□□□ 0.23
PCDHB11-202ENST00000624887 ACACAQ13085 2346 aa16.49■□□□□ 0.23
PCDHB11-202ENST00000624887 IGKV1D-17A0A075B6S4 117 aa16.49■□□□□ 0.23
PCDHB11-202ENST00000624887 SIGLEC5O15389 551 aa16.49■□□□□ 0.23
PCDHB11-202ENST00000624887 IGKV1-5P01602 117 aa16.49■□□□□ 0.23
PCDHB11-202ENST00000624887 H2AFB1P0C5Y9 115 aa16.49■□□□□ 0.23
PCDHB11-202ENST00000624887 DANCRP0C864 163 aa16.49■□□□□ 0.23
PCDHB11-202ENST00000624887 CCKARP32238 428 aa16.49■□□□□ 0.23
PCDHB11-202ENST00000624887 BAXQ07812 192 aa16.49■□□□□ 0.23
PCDHB11-202ENST00000624887 ZNF266Q14584 549 aa16.49■□□□□ 0.23
PCDHB11-202ENST00000624887 SWI5Q1ZZU3 235 aa16.49■□□□□ 0.23
PCDHB11-202ENST00000624887 TRAT1Q6PIZ9 186 aa16.49■□□□□ 0.23
PCDHB11-202ENST00000624887 Q6ZRG5 221 aa16.49■□□□□ 0.23
PCDHB11-202ENST00000624887 Q6ZRM9 215 aa16.49■□□□□ 0.23
PCDHB11-202ENST00000624887 ODF3L1Q8IXM7 274 aa16.49■□□□□ 0.23
PCDHB11-202ENST00000624887 TPRX1Q8N7U7 411 aa16.49■□□□□ 0.23
PCDHB11-202ENST00000624887 LYPD6BQ8NI32 183 aa16.49■□□□□ 0.23
PCDHB11-202ENST00000624887 OR2D2Q9H210 308 aa16.49■□□□□ 0.23
PCDHB11-202ENST00000624887 BSNQ9UPA5 3926 aa16.49■□□□□ 0.23
PCDHB11-202ENST00000624887 SPRY3O43610 288 aa16.48■□□□□ 0.23
PCDHB11-202ENST00000624887 NXPH3O95157 252 aa16.48■□□□□ 0.23
PCDHB11-202ENST00000624887 CD40P25942 277 aa16.48■□□□□ 0.23
PCDHB11-202ENST00000624887 SSTR5P35346 364 aa16.48■□□□□ 0.23
PCDHB11-202ENST00000624887 PAX9P55771 341 aa16.48■□□□□ 0.23
PCDHB11-202ENST00000624887 EIF4EBP1Q13541 118 aaPredicted RBP16.48■□□□□ 0.23
PCDHB11-202ENST00000624887 MSMO1Q15800 293 aa16.48■□□□□ 0.23
PCDHB11-202ENST00000624887 SPRNQ5BIV9 151 aa16.48■□□□□ 0.23
PCDHB11-202ENST00000624887 MOGAT3Q86VF5 341 aa16.48■□□□□ 0.23
PCDHB11-202ENST00000624887 LRRC46Q96FV0 321 aa16.48■□□□□ 0.23
PCDHB11-202ENST00000624887 LHBP01229 141 aa16.47■□□□□ 0.23
PCDHB11-202ENST00000624887 ASCL1P50553 236 aa16.47■□□□□ 0.23
PCDHB11-202ENST00000624887 SELENOVP59797 346 aa16.47■□□□□ 0.23
PCDHB11-202ENST00000624887 IZUMO4Q1ZYL8 232 aa16.47■□□□□ 0.23
PCDHB11-202ENST00000624887 FAM53AQ6NSI3 398 aaPredicted RBP16.47■□□□□ 0.23
PCDHB11-202ENST00000624887 MRPL37Q9BZE1 423 aaKnown RBP16.47■□□□□ 0.23
PCDHB11-202ENST00000624887 CACNG5Q9UF02 275 aa16.47■□□□□ 0.23
PCDHB11-202ENST00000624887 RNF150Q9ULK6 438 aa16.47■□□□□ 0.23
PCDHB11-202ENST00000624887 CACNA1DQ01668 2161 aa16.47■□□□□ 0.23
PCDHB11-202ENST00000624887 RP1L1Q8IWN7 2480 aaPredicted RBP16.47■□□□□ 0.23
PCDHB11-202ENST00000624887 OMGP23515 440 aa16.47■□□□□ 0.23
PCDHB11-202ENST00000624887 PPP1CCP36873 323 aaKnown RBP16.47■□□□□ 0.23
PCDHB11-202ENST00000624887 GATA4P43694 442 aa16.47■□□□□ 0.23
PCDHB11-202ENST00000624887 RAB5CP51148 216 aa16.47■□□□□ 0.23
PCDHB11-202ENST00000624887 HTD2P86397 168 aa16.47■□□□□ 0.23
PCDHB11-202ENST00000624887 DEFA5Q01523 94 aa16.47■□□□□ 0.23
PCDHB11-202ENST00000624887 CLINT1Q14677 625 aa16.47■□□□□ 0.23
PCDHB11-202ENST00000624887 ATRAIDQ6UW56 229 aa16.47■□□□□ 0.23
PCDHB11-202ENST00000624887 GFRALQ6UXV0 394 aa16.47■□□□□ 0.23
PCDHB11-202ENST00000624887 HSD17B11Q8NBQ5 300 aa16.47■□□□□ 0.23
PCDHB11-202ENST00000624887 PPP1R35Q8TAP8 253 aa16.47■□□□□ 0.23
PCDHB11-202ENST00000624887 ITLN1Q8WWA0 313 aa16.47■□□□□ 0.23
PCDHB11-202ENST00000624887 C5orf30Q96GV9 206 aa16.47■□□□□ 0.23
PCDHB11-202ENST00000624887 SNX22Q96L94 193 aa16.47■□□□□ 0.23
PCDHB11-202ENST00000624887 RAB40CQ96S21 281 aa16.47■□□□□ 0.23
PCDHB11-202ENST00000624887 SH3BGRL3Q9H299 93 aa16.47■□□□□ 0.23
PCDHB11-202ENST00000624887 ELOVL5Q9NYP7 299 aa16.47■□□□□ 0.23
PCDHB11-202ENST00000624887 C15orf65H3BRN8 121 aa16.46■□□□□ 0.23
PCDHB11-202ENST00000624887 SPINT2O43291 252 aa16.46■□□□□ 0.23
PCDHB11-202ENST00000624887 ATG12O94817 140 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms