RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 DEDD2Q8WXF8 326 aa16.17■□□□□ 0.18
PDLIM2-221ENST00000622702 GINS4Q9BRT9 223 aa16.17■□□□□ 0.18
PDLIM2-221ENST00000622702 IGHV2-26A0A0B4J1V2 119 aa16.16■□□□□ 0.18
PDLIM2-221ENST00000622702 AKAIN1P0CW23 69 aa16.16■□□□□ 0.18
PDLIM2-221ENST00000622702 CEACAM6P40199 344 aa16.16■□□□□ 0.18
PDLIM2-221ENST00000622702 RFX2P48378 723 aa16.16■□□□□ 0.18
PDLIM2-221ENST00000622702 H1FOOQ8IZA3 346 aaPredicted RBP16.16■□□□□ 0.18
PDLIM2-221ENST00000622702 ABHD12Q8N2K0 398 aa16.16■□□□□ 0.18
PDLIM2-221ENST00000622702 TOMM5Q8N4H5 51 aa16.16■□□□□ 0.18
PDLIM2-221ENST00000622702 ZNF439Q8NDP4 499 aa16.16■□□□□ 0.18
PDLIM2-221ENST00000622702 OR9G1Q8NH87 305 aa16.16■□□□□ 0.18
PDLIM2-221ENST00000622702 CLEC7AQ9BXN2 247 aa16.16■□□□□ 0.18
PDLIM2-221ENST00000622702 EHFQ9NZC4 300 aa16.16■□□□□ 0.18
PDLIM2-221ENST00000622702 PSG11Q9UQ72 335 aa16.16■□□□□ 0.18
PDLIM2-221ENST00000622702 FAM172BPA6NC97 362 aa16.16■□□□□ 0.18
PDLIM2-221ENST00000622702 ITGB1BP1O14713 200 aa16.16■□□□□ 0.18
PDLIM2-221ENST00000622702 RAB3DO95716 219 aa16.16■□□□□ 0.18
PDLIM2-221ENST00000622702 COX7A1P24310 79 aa16.16■□□□□ 0.18
PDLIM2-221ENST00000622702 UBE2E1P51965 193 aa16.16■□□□□ 0.18
PDLIM2-221ENST00000622702 PRB3Q04118 309 aaPredicted RBP16.16■□□□□ 0.18
PDLIM2-221ENST00000622702 KLRD1Q13241 179 aa16.16■□□□□ 0.18
PDLIM2-221ENST00000622702 PNKDQ8N490 385 aa16.16■□□□□ 0.18
PDLIM2-221ENST00000622702 ZNF596Q8TC21 504 aa16.16■□□□□ 0.18
PDLIM2-221ENST00000622702 LEAP2Q969E1 77 aa16.16■□□□□ 0.18
PDLIM2-221ENST00000622702 LHX4Q969G2 390 aa16.16■□□□□ 0.18
PDLIM2-221ENST00000622702 TINAGL1Q9GZM7 467 aaPredicted RBP16.16■□□□□ 0.18
PDLIM2-221ENST00000622702 RDH8Q9NYR8 311 aa16.16■□□□□ 0.18
PDLIM2-221ENST00000622702 ZNF69Q9UC07 566 aa16.16■□□□□ 0.18
PDLIM2-221ENST00000622702 JMJD1CQ15652 2540 aa16.15■□□□□ 0.18
PDLIM2-221ENST00000622702 CENPVL3A0A0U1RRI6 287 aa16.15■□□□□ 0.18
PDLIM2-221ENST00000622702 M0QYG6 137 aa16.15■□□□□ 0.18
PDLIM2-221ENST00000622702 TUSC2O75896 110 aa16.15■□□□□ 0.18
PDLIM2-221ENST00000622702 INPP1P49441 399 aa16.15■□□□□ 0.18
PDLIM2-221ENST00000622702 MEF2DQ14814 521 aa16.15■□□□□ 0.18
PDLIM2-221ENST00000622702 ZNF626Q68DY1 528 aa16.15■□□□□ 0.18
PDLIM2-221ENST00000622702 ZNF660Q6AZW8 331 aaPredicted RBP16.15■□□□□ 0.18
PDLIM2-221ENST00000622702 DHRS11Q6UWP2 260 aa16.15■□□□□ 0.18
PDLIM2-221ENST00000622702 ARRDC1Q8N5I2 433 aa16.15■□□□□ 0.18
PDLIM2-221ENST00000622702 LINC00311Q8N616 119 aa16.15■□□□□ 0.18
PDLIM2-221ENST00000622702 TEX29Q8N6K0 151 aa16.15■□□□□ 0.18
PDLIM2-221ENST00000622702 BEND2Q8NDZ0 799 aa16.15■□□□□ 0.18
PDLIM2-221ENST00000622702 FAM216AQ8WUB2 273 aa16.15■□□□□ 0.18
PDLIM2-221ENST00000622702 GIMAP1Q8WWP7 306 aa16.15■□□□□ 0.18
PDLIM2-221ENST00000622702 EDARADDQ8WWZ3 215 aa16.15■□□□□ 0.18
PDLIM2-221ENST00000622702 PARP12Q9H0J9 701 aaKnown RBP16.15■□□□□ 0.18
PDLIM2-221ENST00000622702 TRAV40A0A0B4J280 105 aa16.14■□□□□ 0.17
PDLIM2-221ENST00000622702 ODF3BA8MYP8 253 aa16.14■□□□□ 0.17
PDLIM2-221ENST00000622702 J3QR06 171 aa16.14■□□□□ 0.17
PDLIM2-221ENST00000622702 UPK1BO75841 260 aa16.14■□□□□ 0.17
PDLIM2-221ENST00000622702 FSHBP01225 129 aa16.14■□□□□ 0.17
PDLIM2-221ENST00000622702 IGLV1-47P01700 117 aa16.14■□□□□ 0.17
PDLIM2-221ENST00000622702 IGHV3-7P01780 117 aa16.14■□□□□ 0.17
PDLIM2-221ENST00000622702 CT45A1Q5HYN5 189 aa16.14■□□□□ 0.17
PDLIM2-221ENST00000622702 KLF17Q5JT82 389 aaPredicted RBP16.14■□□□□ 0.17
PDLIM2-221ENST00000622702 ZNF57Q68EA5 555 aaPredicted RBP16.14■□□□□ 0.17
PDLIM2-221ENST00000622702 SLC25A48Q6ZT89 311 aaKnown RBP16.14■□□□□ 0.17
PDLIM2-221ENST00000622702 OR4D10Q8NGI6 311 aa16.14■□□□□ 0.17
PDLIM2-221ENST00000622702 OR4C16Q8NGL9 310 aa16.14■□□□□ 0.17
PDLIM2-221ENST00000622702 CT45A3Q8NHU0 189 aa16.14■□□□□ 0.17
PDLIM2-221ENST00000622702 IFNA6P05013 189 aa16.13■□□□□ 0.17
PDLIM2-221ENST00000622702 NFYAP23511 347 aaPredicted RBP16.13■□□□□ 0.17
PDLIM2-221ENST00000622702 FCGR2CP31995 323 aa16.13■□□□□ 0.17
PDLIM2-221ENST00000622702 FAUP35544 74 aaKnown RBP16.13■□□□□ 0.17
PDLIM2-221ENST00000622702 GNG10P50151 68 aa16.13■□□□□ 0.17
PDLIM2-221ENST00000622702 ZNF134P52741 427 aa16.13■□□□□ 0.17
PDLIM2-221ENST00000622702 PRRX1P54821 245 aa16.13■□□□□ 0.17
PDLIM2-221ENST00000622702 GPR157Q5UAW9 335 aa16.13■□□□□ 0.17
PDLIM2-221ENST00000622702 OR2AK2Q8NG84 335 aa16.13■□□□□ 0.17
PDLIM2-221ENST00000622702 OR6F1Q8NGZ6 308 aa16.13■□□□□ 0.17
PDLIM2-221ENST00000622702 NANPQ8TBE9 248 aa16.13■□□□□ 0.17
PDLIM2-221ENST00000622702 ABHD14AQ9BUJ0 271 aa16.13■□□□□ 0.17
PDLIM2-221ENST00000622702 C11orf54Q9H0W9 315 aaPredicted RBP16.13■□□□□ 0.17
PDLIM2-221ENST00000622702 ABCB10Q9NRK6 738 aa16.13■□□□□ 0.17
PDLIM2-221ENST00000622702 OR2W1Q9Y3N9 320 aa16.13■□□□□ 0.17
PDLIM2-221ENST00000622702 IGHV1-69DA0A0B4J2H0 117 aa16.12■□□□□ 0.17
PDLIM2-221ENST00000622702 TOR1AO14656 332 aa16.12■□□□□ 0.17
PDLIM2-221ENST00000622702 SLC31A2O15432 143 aa16.12■□□□□ 0.17
PDLIM2-221ENST00000622702 IGHV1-69P01742 117 aa16.12■□□□□ 0.17
PDLIM2-221ENST00000622702 ZNF735P0CB33 412 aa16.12■□□□□ 0.17
PDLIM2-221ENST00000622702 IGHV4-38-2P0DP08 117 aa16.12■□□□□ 0.17
PDLIM2-221ENST00000622702 RAB7AP51149 207 aa16.12■□□□□ 0.17
PDLIM2-221ENST00000622702 HLA-DRB5Q30154 266 aa16.12■□□□□ 0.17
PDLIM2-221ENST00000622702 TMEM17Q86X19 198 aa16.12■□□□□ 0.17
PDLIM2-221ENST00000622702 PDZD9Q8IXQ8 264 aa16.12■□□□□ 0.17
PDLIM2-221ENST00000622702 AGMATQ9BSE5 352 aa16.12■□□□□ 0.17
PDLIM2-221ENST00000622702 MMP28Q9H239 520 aa16.12■□□□□ 0.17
PDLIM2-221ENST00000622702 HRASLSQ9HDD0 168 aa16.12■□□□□ 0.17
PDLIM2-221ENST00000622702 PPYP01298 95 aa16.11■□□□□ 0.17
PDLIM2-221ENST00000622702 AMY2AP04746 511 aa16.11■□□□□ 0.17
PDLIM2-221ENST00000622702 AADACP22760 399 aa16.11■□□□□ 0.17
PDLIM2-221ENST00000622702 BPIFB3P59826 476 aa16.11■□□□□ 0.17
PDLIM2-221ENST00000622702 TSPAN5P62079 268 aa16.11■□□□□ 0.17
PDLIM2-221ENST00000622702 MIDNQ504T8 468 aa16.11■□□□□ 0.17
PDLIM2-221ENST00000622702 FAAP20Q6NZ36 180 aa16.11■□□□□ 0.17
PDLIM2-221ENST00000622702 PRIMA1Q86XR5 153 aa16.11■□□□□ 0.17
PDLIM2-221ENST00000622702 OR4P4Q8NGL7 312 aa16.11■□□□□ 0.17
PDLIM2-221ENST00000622702 OR56B4Q8NH76 319 aa16.11■□□□□ 0.17
PDLIM2-221ENST00000622702 BORCS5Q969J3 196 aa16.11■□□□□ 0.17
PDLIM2-221ENST00000622702 SLC6A7Q99884 636 aa16.11■□□□□ 0.17
PDLIM2-221ENST00000622702 C7orf50Q9BRJ6 194 aaKnown RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms