RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 CHMP1AQ9HD42 196 aaPredicted RBP14.2□□□□□ -0.14
SRSF1-208ENST00000584773 AK3Q9UIJ7 227 aa14.2□□□□□ -0.14
SRSF1-208ENST00000584773 NAPSAO96009 420 aa14.19□□□□□ -0.14
SRSF1-208ENST00000584773 ARSBP15848 533 aa14.19□□□□□ -0.14
SRSF1-208ENST00000584773 LSAMPQ13449 338 aa14.19□□□□□ -0.14
SRSF1-208ENST00000584773 RAB11BQ15907 218 aa14.19□□□□□ -0.14
SRSF1-208ENST00000584773 WFDC9Q8NEX5 89 aa14.19□□□□□ -0.14
SRSF1-208ENST00000584773 CHPT1Q8WUD6 406 aa14.19□□□□□ -0.14
SRSF1-208ENST00000584773 IL1F10Q8WWZ1 152 aa14.19□□□□□ -0.14
SRSF1-208ENST00000584773 RITA1Q96K30 269 aa14.19□□□□□ -0.14
SRSF1-208ENST00000584773 LIN7CQ9NUP9 197 aaKnown RBP14.19□□□□□ -0.14
SRSF1-208ENST00000584773 PLEKHJ1Q9NW61 149 aa14.19□□□□□ -0.14
SRSF1-208ENST00000584773 SHISA3A0PJX4 238 aa14.18□□□□□ -0.14
SRSF1-208ENST00000584773 FOXI3A8MTJ6 420 aaPredicted RBP14.18□□□□□ -0.14
SRSF1-208ENST00000584773 ST8SIA5O15466 376 aa14.18□□□□□ -0.14
SRSF1-208ENST00000584773 LANCL1O43813 399 aa14.18□□□□□ -0.14
SRSF1-208ENST00000584773 CNTFRP26992 372 aa14.18□□□□□ -0.14
SRSF1-208ENST00000584773 TMEM50BP56557 158 aa14.18□□□□□ -0.14
SRSF1-208ENST00000584773 RPL23AP62750 156 aaKnown RBP14.18□□□□□ -0.14
SRSF1-208ENST00000584773 HTD2P86397 168 aa14.18□□□□□ -0.14
SRSF1-208ENST00000584773 TBCEQ15813 527 aaPredicted RBP14.18□□□□□ -0.14
SRSF1-208ENST00000584773 HES5Q5TA89 166 aa14.18□□□□□ -0.14
SRSF1-208ENST00000584773 FOXB2Q5VYV0 432 aa14.18□□□□□ -0.14
SRSF1-208ENST00000584773 ZNF880Q6PDB4 577 aa14.18□□□□□ -0.14
SRSF1-208ENST00000584773 C8orf86Q6ZUL3 223 aa14.18□□□□□ -0.14
SRSF1-208ENST00000584773 OR2W3Q7Z3T1 314 aa14.18□□□□□ -0.14
SRSF1-208ENST00000584773 ZNF554Q86TJ5 538 aa14.18□□□□□ -0.14
SRSF1-208ENST00000584773 FOXRED2Q8IWF2 684 aa14.18□□□□□ -0.14
SRSF1-208ENST00000584773 FAM71E2Q8N5Q1 922 aa14.18□□□□□ -0.14
SRSF1-208ENST00000584773 GALMQ96C23 342 aa14.18□□□□□ -0.14
SRSF1-208ENST00000584773 IFI27L2Q9H2X8 130 aa14.18□□□□□ -0.14
SRSF1-208ENST00000584773 SAA2-SAA4A0A096LPE2 208 aa14.17□□□□□ -0.14
SRSF1-208ENST00000584773 TXNL1O43396 289 aa14.17□□□□□ -0.14
SRSF1-208ENST00000584773 YPEL1O60688 119 aa14.17□□□□□ -0.14
SRSF1-208ENST00000584773 ARL6IP5O75915 188 aa14.17□□□□□ -0.14
SRSF1-208ENST00000584773 ATP6V1G2O95670 118 aa14.17□□□□□ -0.14
SRSF1-208ENST00000584773 SAA2P0DJI9 122 aaPredicted RBP14.17□□□□□ -0.14
SRSF1-208ENST00000584773 SLC2A2P11168 524 aaPredicted RBP14.17□□□□□ -0.14
SRSF1-208ENST00000584773 HSPA13P48723 471 aa14.17□□□□□ -0.14
SRSF1-208ENST00000584773 VEGFCP49767 419 aa14.17□□□□□ -0.14
SRSF1-208ENST00000584773 OR10A3P58181 314 aa14.17□□□□□ -0.14
SRSF1-208ENST00000584773 TRAM1Q15629 374 aa14.17□□□□□ -0.14
SRSF1-208ENST00000584773 DUX3Q96PT4 197 aa14.17□□□□□ -0.14
SRSF1-208ENST00000584773 YPEL2Q96QA6 119 aa14.17□□□□□ -0.14
SRSF1-208ENST00000584773 RASL11BQ9BPW5 248 aa14.17□□□□□ -0.14
SRSF1-208ENST00000584773 NABP2Q9BQ15 211 aa14.17□□□□□ -0.14
SRSF1-208ENST00000584773 ACOT13Q9NPJ3 140 aa14.17□□□□□ -0.14
SRSF1-208ENST00000584773 AURKAIP1Q9NWT8 199 aaPredicted RBP14.17□□□□□ -0.14
SRSF1-208ENST00000584773 OR1A1Q9P1Q5 309 aa14.17□□□□□ -0.14
SRSF1-208ENST00000584773 PSMA1P25786 263 aaKnown RBP14.16□□□□□ -0.14
SRSF1-208ENST00000584773 STEAP3Q658P3 488 aa14.16□□□□□ -0.14
SRSF1-208ENST00000584773 ZNF833PQ6ZTB9 187 aa14.16□□□□□ -0.14
SRSF1-208ENST00000584773 ZNF367Q7RTV3 350 aa14.16□□□□□ -0.14
SRSF1-208ENST00000584773 FAM89BQ8N5H3 189 aa14.16□□□□□ -0.14
SRSF1-208ENST00000584773 LINC00482Q8N8I6 264 aa14.16□□□□□ -0.14
SRSF1-208ENST00000584773 ARHGAP5-AS1Q96IT6 56 aa14.16□□□□□ -0.14
SRSF1-208ENST00000584773 URM1Q9BTM9 101 aaKnown RBP14.16□□□□□ -0.14
SRSF1-208ENST00000584773 ABRACLQ9P1F3 81 aa14.16□□□□□ -0.14
SRSF1-208ENST00000584773 TMEM272A0A1B0GTI8 110 aa14.15□□□□□ -0.14
SRSF1-208ENST00000584773 NUDT19A8MXV4 375 aa14.15□□□□□ -0.14
SRSF1-208ENST00000584773 AP4M1O00189 453 aa14.15□□□□□ -0.14
SRSF1-208ENST00000584773 RPLP1P05386 114 aaKnown RBP14.15□□□□□ -0.14
SRSF1-208ENST00000584773 MMDQ15546 238 aa14.15□□□□□ -0.14
SRSF1-208ENST00000584773 C2orf76Q3KRA6 126 aa14.15□□□□□ -0.14
SRSF1-208ENST00000584773 RPL39P5Q59GN2 51 aa14.15□□□□□ -0.14
SRSF1-208ENST00000584773 PLAC9Q5JTB6 97 aa14.15□□□□□ -0.14
SRSF1-208ENST00000584773 MRPL41Q8IXM3 137 aaKnown RBP14.15□□□□□ -0.14
SRSF1-208ENST00000584773 KLHL30-AS1Q8NEE0 82 aa14.15□□□□□ -0.14
SRSF1-208ENST00000584773 OR2AK2Q8NG84 335 aa14.15□□□□□ -0.14
SRSF1-208ENST00000584773 FAM3DQ96BQ1 224 aa14.15□□□□□ -0.14
SRSF1-208ENST00000584773 PECRQ9BY49 303 aa14.15□□□□□ -0.14
SRSF1-208ENST00000584773 NECAP2Q9NVZ3 263 aa14.15□□□□□ -0.14
SRSF1-208ENST00000584773 RAB26Q9ULW5 256 aa14.15□□□□□ -0.14
SRSF1-208ENST00000584773 V9GY05 133 aa14.15□□□□□ -0.14
SRSF1-208ENST00000584773 A0A0B4J203 849 aa14.15□□□□□ -0.15
SRSF1-208ENST00000584773 LDLRAD4O15165 306 aa14.15□□□□□ -0.15
SRSF1-208ENST00000584773 RGS11O94810 467 aa14.15□□□□□ -0.15
SRSF1-208ENST00000584773 SCTP09683 121 aa14.15□□□□□ -0.15
SRSF1-208ENST00000584773 THBS3P49746 956 aa14.15□□□□□ -0.15
SRSF1-208ENST00000584773 ACTBP60709 375 aa14.15□□□□□ -0.15
SRSF1-208ENST00000584773 SLC35B1P78383 322 aa14.15□□□□□ -0.15
SRSF1-208ENST00000584773 HLA-DRB3P79483 266 aa14.15□□□□□ -0.15
SRSF1-208ENST00000584773 MOGAT2Q3SYC2 334 aa14.15□□□□□ -0.15
SRSF1-208ENST00000584773 GLDNQ6ZMI3 551 aaPredicted RBP14.15□□□□□ -0.15
SRSF1-208ENST00000584773 MRAPQ8TCY5 172 aa14.15□□□□□ -0.15
SRSF1-208ENST00000584773 ABHD14BQ96IU4 210 aa14.15□□□□□ -0.15
SRSF1-208ENST00000584773 ZNF251Q9BRH9 671 aa14.15□□□□□ -0.15
SRSF1-208ENST00000584773 SLC23A1Q9UHI7 598 aa14.15□□□□□ -0.15
SRSF1-208ENST00000584773 TRBV6-6A0A0A6YYG2 114 aa14.14□□□□□ -0.15
SRSF1-208ENST00000584773 SMIM30A4D0T7 59 aa14.14□□□□□ -0.15
SRSF1-208ENST00000584773 SOX6P35712 828 aa14.14□□□□□ -0.15
SRSF1-208ENST00000584773 DEFB136Q30KP8 78 aa14.14□□□□□ -0.15
SRSF1-208ENST00000584773 LY6G6FQ5SQ64 297 aa14.14□□□□□ -0.15
SRSF1-208ENST00000584773 OR8H1Q8NGG4 311 aa14.14□□□□□ -0.15
SRSF1-208ENST00000584773 Q9N2K0 584 aa14.14□□□□□ -0.15
SRSF1-208ENST00000584773 NDUFB11Q9NX14 153 aa14.14□□□□□ -0.15
SRSF1-208ENST00000584773 STEAP1Q9UHE8 339 aa14.14□□□□□ -0.15
SRSF1-208ENST00000584773 ZNF107Q9UII5 783 aaPredicted RBP14.14□□□□□ -0.15
SRSF1-208ENST00000584773 BLOC1S6Q9UL45 172 aa14.14□□□□□ -0.15
SRSF1-208ENST00000584773 LRRC42Q9Y546 428 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms