RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 FAM219AQ8IW50 185 aa16.98■□□□□ 0.31
SMG8-203ENST00000578922 LGI3Q8N145 548 aa16.98■□□□□ 0.31
SMG8-203ENST00000578922 TOMM40LQ969M1 308 aa16.98■□□□□ 0.31
SMG8-203ENST00000578922 C18orf12Q96KH6 178 aa16.98■□□□□ 0.31
SMG8-203ENST00000578922 METRNQ9UJH8 293 aa16.98■□□□□ 0.31
SMG8-203ENST00000578922 SIAH2O43255 324 aa16.98■□□□□ 0.31
SMG8-203ENST00000578922 GPR137BO60478 399 aa16.98■□□□□ 0.31
SMG8-203ENST00000578922 FAM201AQ5SY85 155 aa16.98■□□□□ 0.31
SMG8-203ENST00000578922 GCSAMQ8N6F7 178 aa16.98■□□□□ 0.31
SMG8-203ENST00000578922 BIN3Q9NQY0 253 aa16.98■□□□□ 0.31
SMG8-203ENST00000578922 KPTNQ9Y664 436 aa16.98■□□□□ 0.31
SMG8-203ENST00000578922 ZFYVE26Q68DK2 2539 aa16.98■□□□□ 0.31
SMG8-203ENST00000578922 F12P00748 615 aaPredicted RBP16.97■□□□□ 0.31
SMG8-203ENST00000578922 OR5AC1P0C628 307 aa16.97■□□□□ 0.31
SMG8-203ENST00000578922 P2RY1P47900 373 aa16.97■□□□□ 0.31
SMG8-203ENST00000578922 FXYD4P59646 89 aa16.97■□□□□ 0.31
SMG8-203ENST00000578922 AVPI1Q5T686 147 aa16.97■□□□□ 0.31
SMG8-203ENST00000578922 TGIF2LYQ8IUE0 185 aa16.97■□□□□ 0.31
SMG8-203ENST00000578922 CCDC71LQ8N9Z2 235 aa16.97■□□□□ 0.31
SMG8-203ENST00000578922 MOB3AQ96BX8 217 aa16.97■□□□□ 0.31
SMG8-203ENST00000578922 KIRREL1Q96J84 757 aa16.97■□□□□ 0.31
SMG8-203ENST00000578922 FBXO9Q9UK97 447 aaPredicted RBP16.97■□□□□ 0.31
SMG8-203ENST00000578922 ZDHHC8Q9ULC8 765 aa16.97■□□□□ 0.31
SMG8-203ENST00000578922 FAM157AC9JC47 383 aa16.96■□□□□ 0.31
SMG8-203ENST00000578922 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.96■□□□□ 0.31
SMG8-203ENST00000578922 TNFSF4P23510 183 aa16.96■□□□□ 0.31
SMG8-203ENST00000578922 GLP1RP43220 463 aa16.96■□□□□ 0.31
SMG8-203ENST00000578922 RAB5CP51148 216 aa16.96■□□□□ 0.31
SMG8-203ENST00000578922 PEA15Q15121 130 aa16.96■□□□□ 0.31
SMG8-203ENST00000578922 GCM1Q9NP62 436 aa16.96■□□□□ 0.31
SMG8-203ENST00000578922 SLC2A9Q9NRM0 540 aa16.96■□□□□ 0.31
SMG8-203ENST00000578922 PLA2G2EQ9NZK7 142 aa16.96■□□□□ 0.31
SMG8-203ENST00000578922 IL19Q9UHD0 177 aa16.96■□□□□ 0.31
SMG8-203ENST00000578922 SRRM5B3KS81 715 aa16.96■□□□□ 0.31
SMG8-203ENST00000578922 SCGB1D2O95969 90 aa16.96■□□□□ 0.31
SMG8-203ENST00000578922 CD80P33681 288 aa16.96■□□□□ 0.31
SMG8-203ENST00000578922 COL10A1Q03692 680 aa16.96■□□□□ 0.31
SMG8-203ENST00000578922 TFF3Q07654 80 aa16.96■□□□□ 0.31
SMG8-203ENST00000578922 DMBX1Q8NFW5 382 aa16.96■□□□□ 0.31
SMG8-203ENST00000578922 GLYATL2Q8WU03 294 aa16.96■□□□□ 0.31
SMG8-203ENST00000578922 GINS3Q9BRX5 216 aa16.96■□□□□ 0.31
SMG8-203ENST00000578922 SMCO4Q9NRQ5 59 aa16.96■□□□□ 0.31
SMG8-203ENST00000578922 GLAP06280 429 aa16.95■□□□□ 0.3
SMG8-203ENST00000578922 DANCRP0C864 163 aa16.95■□□□□ 0.3
SMG8-203ENST00000578922 PRR18Q8N4B5 295 aa16.95■□□□□ 0.3
SMG8-203ENST00000578922 UBALD1Q8TB05 177 aa16.95■□□□□ 0.3
SMG8-203ENST00000578922 MSI2Q96DH6 328 aaKnown RBP16.95■□□□□ 0.3
SMG8-203ENST00000578922 RSRP1Q9BUV0 290 aa16.95■□□□□ 0.3
SMG8-203ENST00000578922 TMED3Q9Y3Q3 217 aa16.95■□□□□ 0.3
SMG8-203ENST00000578922 C17orf100A8MU93 164 aa16.95■□□□□ 0.3
SMG8-203ENST00000578922 VSTM5A8MXK1 200 aa16.95■□□□□ 0.3
SMG8-203ENST00000578922 TRDCB7Z8K6 153 aa16.95■□□□□ 0.3
SMG8-203ENST00000578922 TSPAN15O95858 294 aa16.95■□□□□ 0.3
SMG8-203ENST00000578922 CYB5R3P00387 301 aaPredicted RBP16.95■□□□□ 0.3
SMG8-203ENST00000578922 SRPXP78539 464 aa16.95■□□□□ 0.3
SMG8-203ENST00000578922 HERPUD1Q15011 391 aa16.95■□□□□ 0.3
SMG8-203ENST00000578922 SP6Q3SY56 376 aa16.95■□□□□ 0.3
SMG8-203ENST00000578922 C4orf17Q53FE4 359 aa16.95■□□□□ 0.3
SMG8-203ENST00000578922 FAM185AQ8N0U4 392 aa16.95■□□□□ 0.3
SMG8-203ENST00000578922 CD177Q8N6Q3 437 aa16.95■□□□□ 0.3
SMG8-203ENST00000578922 ERGIC1Q969X5 290 aa16.95■□□□□ 0.3
SMG8-203ENST00000578922 RIMS4Q9H426 269 aaPredicted RBP16.95■□□□□ 0.3
SMG8-203ENST00000578922 TRAPPC2LQ9UL33 140 aa16.95■□□□□ 0.3
SMG8-203ENST00000578922 RNF115Q9Y4L5 304 aa16.95■□□□□ 0.3
SMG8-203ENST00000578922 WIPI2Q9Y4P8 454 aa16.95■□□□□ 0.3
SMG8-203ENST00000578922 ST8SIA3O43173 380 aa16.94■□□□□ 0.3
SMG8-203ENST00000578922 PSG2P11465 335 aa16.94■□□□□ 0.3
SMG8-203ENST00000578922 FOLR2P14207 255 aa16.94■□□□□ 0.3
SMG8-203ENST00000578922 GABRA2P47869 451 aa16.94■□□□□ 0.3
SMG8-203ENST00000578922 ZNF497Q6ZNH5 498 aa16.94■□□□□ 0.3
SMG8-203ENST00000578922 LYZL2Q7Z4W2 148 aa16.94■□□□□ 0.3
SMG8-203ENST00000578922 SMIM3Q9BZL3 60 aa16.94■□□□□ 0.3
SMG8-203ENST00000578922 DCAF16Q9NXF7 216 aa16.94■□□□□ 0.3
SMG8-203ENST00000578922 STRAPQ9Y3F4 350 aaKnown RBP16.94■□□□□ 0.3
SMG8-203ENST00000578922 ABCA4P78363 2273 aa16.94■□□□□ 0.3
SMG8-203ENST00000578922 OR8U9P0C7N5 309 aa16.94■□□□□ 0.3
SMG8-203ENST00000578922 SPP1P10451 314 aa16.94■□□□□ 0.3
SMG8-203ENST00000578922 PRDX2P32119 198 aa16.94■□□□□ 0.3
SMG8-203ENST00000578922 MDH2P40926 338 aaKnown RBP16.94■□□□□ 0.3
SMG8-203ENST00000578922 HERV-K104P61576 105 aa16.94■□□□□ 0.3
SMG8-203ENST00000578922 AESQ08117 197 aa16.94■□□□□ 0.3
SMG8-203ENST00000578922 OR8U1Q8NH10 309 aa16.94■□□□□ 0.3
SMG8-203ENST00000578922 CISD1Q9NZ45 108 aaKnown RBP16.94■□□□□ 0.3
SMG8-203ENST00000578922 PPP1R3CQ9UQK1 317 aa16.94■□□□□ 0.3
SMG8-203ENST00000578922 KIAA2026Q5HYC2 2103 aa16.93■□□□□ 0.3
SMG8-203ENST00000578922 IGKV1-6A0A0C4DH72 117 aa16.93■□□□□ 0.3
SMG8-203ENST00000578922 MEX3AA1L020 520 aaKnown RBP16.93■□□□□ 0.3
SMG8-203ENST00000578922 AADACP22760 399 aa16.93■□□□□ 0.3
SMG8-203ENST00000578922 SNCAP37840 140 aa16.93■□□□□ 0.3
SMG8-203ENST00000578922 GATA4P43694 442 aa16.93■□□□□ 0.3
SMG8-203ENST00000578922 SRSF7Q16629 238 aaKnown RBP eCLIP16.93■□□□□ 0.3
SMG8-203ENST00000578922 Q6ZS49 121 aa16.93■□□□□ 0.3
SMG8-203ENST00000578922 TPRX1Q8N7U7 411 aa16.93■□□□□ 0.3
SMG8-203ENST00000578922 C15orf54Q8N8G6 183 aa16.93■□□□□ 0.3
SMG8-203ENST00000578922 RXFP4Q8TDU9 374 aa16.93■□□□□ 0.3
SMG8-203ENST00000578922 IL1F10Q8WWZ1 152 aa16.93■□□□□ 0.3
SMG8-203ENST00000578922 DYNLRB1Q9NP97 96 aa16.93■□□□□ 0.3
SMG8-203ENST00000578922 CACFD1Q9UGQ2 172 aa16.93■□□□□ 0.3
SMG8-203ENST00000578922 IGKV1D-17A0A075B6S4 117 aa16.92■□□□□ 0.3
SMG8-203ENST00000578922 KIR2DS1A0A191URI9 304 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms