RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, human

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB40B-204	ENST00000571554	SOCS1	O15524	211 aa		10.81	□□□□□ -0.68
RAB40B-204	ENST00000571554	TXNL1	O43396	289 aa		10.81	□□□□□ -0.68
RAB40B-204	ENST00000571554	THBS3	P49746	956 aa		10.81	□□□□□ -0.68
RAB40B-204	ENST00000571554	CLDN12	P56749	244 aa		10.81	□□□□□ -0.68
RAB40B-204	ENST00000571554	RAB25	P57735	213 aa		10.81	□□□□□ -0.68
RAB40B-204	ENST00000571554	QRFP	P83859	136 aa		10.81	□□□□□ -0.68
RAB40B-204	ENST00000571554	MMD	Q15546	238 aa		10.81	□□□□□ -0.68
RAB40B-204	ENST00000571554	HMGN3	Q15651	99 aa		10.81	□□□□□ -0.68
RAB40B-204	ENST00000571554	DEFB136	Q30KP8	78 aa		10.81	□□□□□ -0.68
RAB40B-204	ENST00000571554	FAM71E2	Q8N5Q1	922 aa		10.81	□□□□□ -0.68
RAB40B-204	ENST00000571554	OR51D1	Q8NGF3	324 aa		10.81	□□□□□ -0.68
RAB40B-204	ENST00000571554	OR6M1	Q8NGM8	313 aa		10.81	□□□□□ -0.68
RAB40B-204	ENST00000571554	KCNG3	Q8TAE7	436 aa		10.81	□□□□□ -0.68
RAB40B-204	ENST00000571554	RCC1L	Q96I51	464 aa	Known RBP	10.81	□□□□□ -0.68
RAB40B-204	ENST00000571554	TM2D1	Q9BX74	207 aa		10.81	□□□□□ -0.68
RAB40B-204	ENST00000571554	PARP12	Q9H0J9	701 aa	Known RBP	10.81	□□□□□ -0.68
RAB40B-204	ENST00000571554	DUSP21	Q9H596	190 aa		10.81	□□□□□ -0.68
RAB40B-204	ENST00000571554	PLGRKT	Q9HBL7	147 aa		10.81	□□□□□ -0.68
RAB40B-204	ENST00000571554	SAA2-SAA4	A0A096LPE2	208 aa		10.8	□□□□□ -0.68
RAB40B-204	ENST00000571554	LANCL1	O43813	399 aa		10.8	□□□□□ -0.68
RAB40B-204	ENST00000571554	BPNT1	O95861	308 aa		10.8	□□□□□ -0.68
RAB40B-204	ENST00000571554	SAA2	P0DJI9	122 aa	Predicted RBP	10.8	□□□□□ -0.68
RAB40B-204	ENST00000571554	SOX6	P35712	828 aa		10.8	□□□□□ -0.68
RAB40B-204	ENST00000571554	TEX38	Q6PEX7	206 aa		10.8	□□□□□ -0.68
RAB40B-204	ENST00000571554	IZUMO2	Q6UXV1	221 aa		10.8	□□□□□ -0.68
RAB40B-204	ENST00000571554	ZNF695	Q8IW36	515 aa		10.8	□□□□□ -0.68
RAB40B-204	ENST00000571554	SVOP	Q8N4V2	548 aa		10.8	□□□□□ -0.68
RAB40B-204	ENST00000571554	OR2AK2	Q8NG84	335 aa		10.8	□□□□□ -0.68
RAB40B-204	ENST00000571554	GALM	Q96C23	342 aa		10.8	□□□□□ -0.68
RAB40B-204	ENST00000571554	CNBD2	Q96M20	576 aa		10.8	□□□□□ -0.68
RAB40B-204	ENST00000571554	NABP2	Q9BQ15	211 aa		10.8	□□□□□ -0.68
RAB40B-204	ENST00000571554	ANKRD60	Q9BZ19	345 aa		10.8	□□□□□ -0.68
RAB40B-204	ENST00000571554	LPAR5	Q9H1C0	372 aa		10.8	□□□□□ -0.68
RAB40B-204	ENST00000571554	PLEKHJ1	Q9NW61	149 aa		10.8	□□□□□ -0.68
RAB40B-204	ENST00000571554	ABRACL	Q9P1F3	81 aa		10.8	□□□□□ -0.68
RAB40B-204	ENST00000571554	AK3	Q9UIJ7	227 aa		10.8	□□□□□ -0.68
RAB40B-204	ENST00000571554	WI2-2373I1.2	A0A1W2PRP0	233 aa		10.79	□□□□□ -0.68
RAB40B-204	ENST00000571554		K7EIL1	84 aa		10.79	□□□□□ -0.68
RAB40B-204	ENST00000571554	YPEL1	O60688	119 aa		10.79	□□□□□ -0.68
RAB40B-204	ENST00000571554	ARSB	P15848	533 aa		10.79	□□□□□ -0.68
RAB40B-204	ENST00000571554	CRHBP	P24387	322 aa		10.79	□□□□□ -0.68
RAB40B-204	ENST00000571554	CALR	P27797	417 aa	Known RBP	10.79	□□□□□ -0.68
RAB40B-204	ENST00000571554	ACTB	P60709	375 aa		10.79	□□□□□ -0.68
RAB40B-204	ENST00000571554	HTD2	P86397	168 aa		10.79	□□□□□ -0.68
RAB40B-204	ENST00000571554	FABP5	Q01469	135 aa		10.79	□□□□□ -0.68
RAB40B-204	ENST00000571554	PLA2G7	Q13093	441 aa		10.79	□□□□□ -0.68
RAB40B-204	ENST00000571554	TPBG	Q13641	420 aa		10.79	□□□□□ -0.68
RAB40B-204	ENST00000571554	RAB11B	Q15907	218 aa		10.79	□□□□□ -0.68
RAB40B-204	ENST00000571554	PNLIPRP3	Q17RR3	467 aa		10.79	□□□□□ -0.68
RAB40B-204	ENST00000571554	CXorf66	Q5JRM2	361 aa	Predicted RBP	10.79	□□□□□ -0.68
RAB40B-204	ENST00000571554	RAX2	Q96IS3	184 aa		10.79	□□□□□ -0.68
RAB40B-204	ENST00000571554	YPEL2	Q96QA6	119 aa		10.79	□□□□□ -0.68
RAB40B-204	ENST00000571554	IFI27L2	Q9H2X8	130 aa		10.79	□□□□□ -0.68
RAB40B-204	ENST00000571554	ZFP57	Q9NU63	452 aa		10.79	□□□□□ -0.68
RAB40B-204	ENST00000571554	ZNF107	Q9UII5	783 aa	Predicted RBP	10.79	□□□□□ -0.68
RAB40B-204	ENST00000571554	WSB1	Q9Y6I7	421 aa		10.79	□□□□□ -0.68
RAB40B-204	ENST00000571554	SLC17A2	O00624	439 aa		10.78	□□□□□ -0.68
RAB40B-204	ENST00000571554	RRP9	O43818	475 aa	Known RBP	10.78	□□□□□ -0.68
RAB40B-204	ENST00000571554	RGS11	O94810	467 aa		10.78	□□□□□ -0.68
RAB40B-204	ENST00000571554	NAPSA	O96009	420 aa		10.78	□□□□□ -0.68
RAB40B-204	ENST00000571554	CPE	P16870	476 aa		10.78	□□□□□ -0.68
RAB40B-204	ENST00000571554	VDAC1	P21796	283 aa		10.78	□□□□□ -0.68
RAB40B-204	ENST00000571554	VEGFC	P49767	419 aa		10.78	□□□□□ -0.68
RAB40B-204	ENST00000571554	MLLT11	Q13015	90 aa	Predicted RBP	10.78	□□□□□ -0.68
RAB40B-204	ENST00000571554	RPL39P5	Q59GN2	51 aa		10.78	□□□□□ -0.68
RAB40B-204	ENST00000571554	HES5	Q5TA89	166 aa		10.78	□□□□□ -0.68
RAB40B-204	ENST00000571554	STEAP3	Q658P3	488 aa		10.78	□□□□□ -0.68
RAB40B-204	ENST00000571554	GLDN	Q6ZMI3	551 aa	Predicted RBP	10.78	□□□□□ -0.68
RAB40B-204	ENST00000571554	ZNF833P	Q6ZTB9	187 aa		10.78	□□□□□ -0.68
RAB40B-204	ENST00000571554	ZNF554	Q86TJ5	538 aa		10.78	□□□□□ -0.68
RAB40B-204	ENST00000571554	COMMD1	Q8N668	190 aa		10.78	□□□□□ -0.68
RAB40B-204	ENST00000571554	OR8H1	Q8NGG4	311 aa		10.78	□□□□□ -0.68
RAB40B-204	ENST00000571554	ABHD14B	Q96IU4	210 aa		10.78	□□□□□ -0.68
RAB40B-204	ENST00000571554	KCTD7	Q96MP8	289 aa		10.78	□□□□□ -0.68
RAB40B-204	ENST00000571554	P2RX4	Q99571	388 aa		10.78	□□□□□ -0.68
RAB40B-204	ENST00000571554	MGLL	Q99685	303 aa		10.78	□□□□□ -0.68
RAB40B-204	ENST00000571554	OR1A1	Q9P1Q5	309 aa		10.78	□□□□□ -0.68
RAB40B-204	ENST00000571554	STEAP1	Q9UHE8	339 aa		10.78	□□□□□ -0.68
RAB40B-204	ENST00000571554		G3V318	75 aa		10.77	□□□□□ -0.69
RAB40B-204	ENST00000571554	CCL24	O00175	119 aa		10.77	□□□□□ -0.69
RAB40B-204	ENST00000571554	ARL6IP5	O75915	188 aa		10.77	□□□□□ -0.69
RAB40B-204	ENST00000571554	CD37	P11049	281 aa		10.77	□□□□□ -0.69
RAB40B-204	ENST00000571554	MYCNOS	P40205	109 aa		10.77	□□□□□ -0.69
RAB40B-204	ENST00000571554	CFHR3	Q02985	330 aa		10.77	□□□□□ -0.69
RAB40B-204	ENST00000571554	FOXE3	Q13461	319 aa		10.77	□□□□□ -0.69
RAB40B-204	ENST00000571554	DEFB121	Q5J5C9	76 aa		10.77	□□□□□ -0.69
RAB40B-204	ENST00000571554	ZNF880	Q6PDB4	577 aa		10.77	□□□□□ -0.69
RAB40B-204	ENST00000571554	FAM131A	Q6UXB0	335 aa		10.77	□□□□□ -0.69
RAB40B-204	ENST00000571554	PRSS48	Q7RTY5	328 aa		10.77	□□□□□ -0.69
RAB40B-204	ENST00000571554	ARHGAP5-AS1	Q96IT6	56 aa		10.77	□□□□□ -0.69
RAB40B-204	ENST00000571554	ZNF251	Q9BRH9	671 aa		10.77	□□□□□ -0.69
RAB40B-204	ENST00000571554	URM1	Q9BTM9	101 aa	Known RBP	10.77	□□□□□ -0.69
RAB40B-204	ENST00000571554	GON7	Q9BXV9	100 aa		10.77	□□□□□ -0.69
RAB40B-204	ENST00000571554	PARP11	Q9NR21	331 aa		10.77	□□□□□ -0.69
RAB40B-204	ENST00000571554	SLC23A1	Q9UHI7	598 aa		10.77	□□□□□ -0.69
RAB40B-204	ENST00000571554	ATP6V0E1	O15342	81 aa		10.76	□□□□□ -0.69
RAB40B-204	ENST00000571554	NBR2	O15453	112 aa		10.76	□□□□□ -0.69
RAB40B-204	ENST00000571554	DUS4L	O95620	317 aa	Known RBP	10.76	□□□□□ -0.69
RAB40B-204	ENST00000571554	SCT	P09683	121 aa		10.76	□□□□□ -0.69
RAB40B-204	ENST00000571554	TMEM50B	P56557	158 aa		10.76	□□□□□ -0.69

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