RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 RUSC1-AS1Q66K80 236 aa13.55□□□□□ -0.24
CLN6-208ENST00000567060 CCDC144NLQ6NUI1 221 aa13.55□□□□□ -0.24
CLN6-208ENST00000567060 PDZD9Q8IXQ8 264 aa13.55□□□□□ -0.24
CLN6-208ENST00000567060 IZUMO1Q8IYV9 350 aa13.55□□□□□ -0.24
CLN6-208ENST00000567060 ZNF439Q8NDP4 499 aa13.55□□□□□ -0.24
CLN6-208ENST00000567060 BEST4Q8NFU0 473 aa13.55□□□□□ -0.24
CLN6-208ENST00000567060 OR10J5Q8NHC4 309 aa13.55□□□□□ -0.24
CLN6-208ENST00000567060 ZFAND2BQ8WV99 257 aa13.55□□□□□ -0.24
CLN6-208ENST00000567060 CYYR1Q96J86 154 aa13.55□□□□□ -0.24
CLN6-208ENST00000567060 ST6GALNAC5Q9BVH7 336 aa13.55□□□□□ -0.24
CLN6-208ENST00000567060 ZNF107Q9UII5 783 aaPredicted RBP13.55□□□□□ -0.24
CLN6-208ENST00000567060 GABARAPH6UMI1 98 aa13.54□□□□□ -0.24
CLN6-208ENST00000567060 TXNL1O43396 289 aa13.54□□□□□ -0.24
CLN6-208ENST00000567060 TNFSF8P32971 234 aa13.54□□□□□ -0.24
CLN6-208ENST00000567060 DYNLT3P51808 116 aa13.54□□□□□ -0.24
CLN6-208ENST00000567060 DLX1P56177 255 aa13.54□□□□□ -0.24
CLN6-208ENST00000567060 TAS2R46P59540 309 aa13.54□□□□□ -0.24
CLN6-208ENST00000567060 LTC4SQ16873 150 aa13.54□□□□□ -0.24
CLN6-208ENST00000567060 OR2AK2Q8NG84 335 aa13.54□□□□□ -0.24
CLN6-208ENST00000567060 OR10X1Q8NGY0 326 aa13.54□□□□□ -0.24
CLN6-208ENST00000567060 OCEL1Q9H607 264 aa13.54□□□□□ -0.24
CLN6-208ENST00000567060 SLC23A1Q9UHI7 598 aa13.54□□□□□ -0.24
CLN6-208ENST00000567060 ZNF230Q9UIE0 474 aaPredicted RBP13.54□□□□□ -0.24
CLN6-208ENST00000567060 POMT1Q9Y6A1 747 aa13.54□□□□□ -0.24
CLN6-208ENST00000567060 A0A0U1RQK1 487 aa13.53□□□□□ -0.24
CLN6-208ENST00000567060 VGLL3A8MV65 326 aa13.53□□□□□ -0.24
CLN6-208ENST00000567060 CLDN34H7C241 214 aa13.53□□□□□ -0.24
CLN6-208ENST00000567060 GSTT2P0CG29 244 aa13.53□□□□□ -0.24
CLN6-208ENST00000567060 GSTT2BP0CG30 244 aa13.53□□□□□ -0.24
CLN6-208ENST00000567060 RCVRNP35243 200 aa13.53□□□□□ -0.24
CLN6-208ENST00000567060 ETV6P41212 452 aa13.53□□□□□ -0.24
CLN6-208ENST00000567060 HILS1P60008 231 aa13.53□□□□□ -0.24
CLN6-208ENST00000567060 DEFB112Q30KQ8 113 aa13.53□□□□□ -0.24
CLN6-208ENST00000567060 FAM71F2Q6NXP2 309 aa13.53□□□□□ -0.24
CLN6-208ENST00000567060 Q6YL49 198 aa13.53□□□□□ -0.24
CLN6-208ENST00000567060 SNX29P2Q8IUI4 249 aa13.53□□□□□ -0.24
CLN6-208ENST00000567060 OR52L2PQ8NGH6 319 aa13.53□□□□□ -0.24
CLN6-208ENST00000567060 OR5R1Q8NH85 324 aa13.53□□□□□ -0.24
CLN6-208ENST00000567060 SGMS2Q8NHU3 365 aa13.53□□□□□ -0.24
CLN6-208ENST00000567060 SSMEM1Q8WWF3 244 aa13.53□□□□□ -0.24
CLN6-208ENST00000567060 FCAMRQ8WWV6 532 aa13.53□□□□□ -0.24
CLN6-208ENST00000567060 ZDHHC16Q969W1 377 aa13.53□□□□□ -0.24
CLN6-208ENST00000567060 SLC6A7Q99884 636 aa13.53□□□□□ -0.24
CLN6-208ENST00000567060 SOSTQ9BQB4 213 aa13.53□□□□□ -0.24
CLN6-208ENST00000567060 ABHD14AQ9BUJ0 271 aa13.53□□□□□ -0.24
CLN6-208ENST00000567060 DPAGT1Q9H3H5 408 aa13.53□□□□□ -0.24
CLN6-208ENST00000567060 PIPOXQ9P0Z9 390 aa13.53□□□□□ -0.24
CLN6-208ENST00000567060 ZNRD1Q9P1U0 126 aa13.53□□□□□ -0.24
CLN6-208ENST00000567060 IGHV3-43A0A0B4J1X8 118 aa13.52□□□□□ -0.25
CLN6-208ENST00000567060 IGKV1-6A0A0C4DH72 117 aa13.52□□□□□ -0.25
CLN6-208ENST00000567060 TMEM89A2RUT3 159 aa13.52□□□□□ -0.25
CLN6-208ENST00000567060 FABP12A6NFH5 140 aa13.52□□□□□ -0.25
CLN6-208ENST00000567060 LY6LH3BQJ8 138 aa13.52□□□□□ -0.25
CLN6-208ENST00000567060 IGHV3-43DP0DP04 118 aa13.52□□□□□ -0.25
CLN6-208ENST00000567060 TBPP20226 339 aa13.52□□□□□ -0.25
CLN6-208ENST00000567060 CEACAM6P40199 344 aa13.52□□□□□ -0.25
CLN6-208ENST00000567060 ARPC4P59998 168 aa13.52□□□□□ -0.25
CLN6-208ENST00000567060 IL18Q14116 193 aa13.52□□□□□ -0.25
CLN6-208ENST00000567060 HERPUD1Q15011 391 aa13.52□□□□□ -0.25
CLN6-208ENST00000567060 ACTBL2Q562R1 376 aa13.52□□□□□ -0.25
CLN6-208ENST00000567060 SPANXN2Q5MJ10 180 aa13.52□□□□□ -0.25
CLN6-208ENST00000567060 BCL6BQ8N143 479 aaPredicted RBP13.52□□□□□ -0.25
CLN6-208ENST00000567060 OR8H3Q8N146 312 aa13.52□□□□□ -0.25
CLN6-208ENST00000567060 OR5AP2Q8NGF4 316 aa13.52□□□□□ -0.25
CLN6-208ENST00000567060 OR6Q1Q8NGQ2 317 aa13.52□□□□□ -0.25
CLN6-208ENST00000567060 UBALD1Q8TB05 177 aa13.52□□□□□ -0.25
CLN6-208ENST00000567060 RPEQ96AT9 228 aa13.52□□□□□ -0.25
CLN6-208ENST00000567060 AJUBAQ96IF1 538 aa13.52□□□□□ -0.25
CLN6-208ENST00000567060 ABHD1Q96SE0 405 aa13.52□□□□□ -0.25
CLN6-208ENST00000567060 GINS4Q9BRT9 223 aa13.52□□□□□ -0.25
CLN6-208ENST00000567060 NECAP2Q9NVZ3 263 aa13.52□□□□□ -0.25
CLN6-208ENST00000567060 A0A1W2PRD5 423 aa13.51□□□□□ -0.25
CLN6-208ENST00000567060 A0A1W2PRF3 423 aa13.51□□□□□ -0.25
CLN6-208ENST00000567060 A0A1W2PRM7 423 aa13.51□□□□□ -0.25
CLN6-208ENST00000567060 FAM172BPA6NC97 362 aa13.51□□□□□ -0.25
CLN6-208ENST00000567060 BTBD17A6NE02 478 aa13.51□□□□□ -0.25
CLN6-208ENST00000567060 RBBP9O75884 186 aa13.51□□□□□ -0.25
CLN6-208ENST00000567060 PPP1CCP36873 323 aaKnown RBP13.51□□□□□ -0.25
CLN6-208ENST00000567060 GNG10P50151 68 aa13.51□□□□□ -0.25
CLN6-208ENST00000567060 PRB3Q04118 309 aaPredicted RBP13.51□□□□□ -0.25
CLN6-208ENST00000567060 ZNF816Q0VGE8 651 aaPredicted RBP13.51□□□□□ -0.25
CLN6-208ENST00000567060 CT45A1Q5HYN5 189 aa13.51□□□□□ -0.25
CLN6-208ENST00000567060 TPTE2P1Q5T6R2 138 aa13.51□□□□□ -0.25
CLN6-208ENST00000567060 CCDC190Q86UF4 302 aa13.51□□□□□ -0.25
CLN6-208ENST00000567060 H1FOOQ8IZA3 346 aaPredicted RBP13.51□□□□□ -0.25
CLN6-208ENST00000567060 C3orf56Q8N813 242 aa13.51□□□□□ -0.25
CLN6-208ENST00000567060 DTX3Q8N9I9 347 aa13.51□□□□□ -0.25
CLN6-208ENST00000567060 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.51□□□□□ -0.25
CLN6-208ENST00000567060 OR10V1Q8NGI7 309 aa13.51□□□□□ -0.25
CLN6-208ENST00000567060 CT45A3Q8NHU0 189 aa13.51□□□□□ -0.25
CLN6-208ENST00000567060 SMIM4Q8WVI0 70 aa13.51□□□□□ -0.25
CLN6-208ENST00000567060 C22orf15Q8WYQ4 148 aa13.51□□□□□ -0.25
CLN6-208ENST00000567060 RDH8Q9NYR8 311 aa13.51□□□□□ -0.25
CLN6-208ENST00000567060 TAS2R8Q9NYW2 309 aa13.51□□□□□ -0.25
CLN6-208ENST00000567060 MTFP1Q9UDX5 166 aa13.51□□□□□ -0.25
CLN6-208ENST00000567060 GAB2Q9UQC2 676 aa13.51□□□□□ -0.25
CLN6-208ENST00000567060 IGKV1D-8A0A087WSZ0 117 aa13.5□□□□□ -0.25
CLN6-208ENST00000567060 RAB29O14966 203 aa13.5□□□□□ -0.25
CLN6-208ENST00000567060 BET1O15155 118 aa13.5□□□□□ -0.25
CLN6-208ENST00000567060 GSTZ1O43708 216 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms