RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 LSAMPQ13449 338 aa13.27□□□□□ -0.29
USB1-211ENST00000565662 BEAN1Q3B7T3 259 aa13.27□□□□□ -0.29
USB1-211ENST00000565662 CT45A1Q5HYN5 189 aa13.27□□□□□ -0.29
USB1-211ENST00000565662 TEX38Q6PEX7 206 aa13.27□□□□□ -0.29
USB1-211ENST00000565662 FAM89BQ8N5H3 189 aa13.27□□□□□ -0.29
USB1-211ENST00000565662 WFDC9Q8NEX5 89 aa13.27□□□□□ -0.29
USB1-211ENST00000565662 OR1L1Q8NH94 360 aa13.27□□□□□ -0.29
USB1-211ENST00000565662 CT45A3Q8NHU0 189 aa13.27□□□□□ -0.29
USB1-211ENST00000565662 SULT4A1Q9BR01 284 aa13.27□□□□□ -0.29
USB1-211ENST00000565662 MCRIP2Q9BUT9 160 aaKnown RBP13.27□□□□□ -0.29
USB1-211ENST00000565662 NDUFB11Q9NX14 153 aa13.27□□□□□ -0.29
USB1-211ENST00000565662 RAB29O14966 203 aa13.26□□□□□ -0.29
USB1-211ENST00000565662 ZBTB25P24278 435 aa13.26□□□□□ -0.29
USB1-211ENST00000565662 GADD45AP24522 165 aa13.26□□□□□ -0.29
USB1-211ENST00000565662 SOX6P35712 828 aa13.26□□□□□ -0.29
USB1-211ENST00000565662 NOTCH1P46531 2555 aa13.26□□□□□ -0.29
USB1-211ENST00000565662 REG1BP48304 166 aa13.26□□□□□ -0.29
USB1-211ENST00000565662 SERPINB10P48595 397 aa13.26□□□□□ -0.29
USB1-211ENST00000565662 RPS25P62851 125 aaKnown RBP13.26□□□□□ -0.29
USB1-211ENST00000565662 DIAPH2-AS1Q14236 149 aa13.26□□□□□ -0.29
USB1-211ENST00000565662 INSL4Q14641 139 aa13.26□□□□□ -0.29
USB1-211ENST00000565662 ZNF880Q6PDB4 577 aa13.26□□□□□ -0.29
USB1-211ENST00000565662 TMEM91Q6ZNR0 172 aa13.26□□□□□ -0.29
USB1-211ENST00000565662 C6orf201Q7Z4U5 140 aa13.26□□□□□ -0.29
USB1-211ENST00000565662 STPG2Q8N412 459 aa13.26□□□□□ -0.29
USB1-211ENST00000565662 OR10V1Q8NGI7 309 aa13.26□□□□□ -0.29
USB1-211ENST00000565662 DPF1Q92782 380 aa13.26□□□□□ -0.29
USB1-211ENST00000565662 PHF21AQ96BD5 680 aa13.26□□□□□ -0.29
USB1-211ENST00000565662 LPAR5Q9H1C0 372 aa13.26□□□□□ -0.29
USB1-211ENST00000565662 OR5H14A6NHG9 310 aa13.25□□□□□ -0.29
USB1-211ENST00000565662 RBBP9O75884 186 aa13.25□□□□□ -0.29
USB1-211ENST00000565662 SCGNO76038 276 aa13.25□□□□□ -0.29
USB1-211ENST00000565662 ELANEP08246 267 aa13.25□□□□□ -0.29
USB1-211ENST00000565662 MC5RP33032 325 aa13.25□□□□□ -0.29
USB1-211ENST00000565662 GPR12P47775 334 aa13.25□□□□□ -0.29
USB1-211ENST00000565662 HNF4GQ14541 408 aa13.25□□□□□ -0.29
USB1-211ENST00000565662 UTF1Q5T230 341 aa13.25□□□□□ -0.29
USB1-211ENST00000565662 ZNF833PQ6ZTB9 187 aa13.25□□□□□ -0.29
USB1-211ENST00000565662 Q8N9W7 124 aa13.25□□□□□ -0.29
USB1-211ENST00000565662 FAM3DQ96BQ1 224 aa13.25□□□□□ -0.29
USB1-211ENST00000565662 FAAP24Q9BTP7 215 aa13.25□□□□□ -0.29
USB1-211ENST00000565662 NECAP2Q9NVZ3 263 aa13.25□□□□□ -0.29
USB1-211ENST00000565662 KIAA1456Q9P272 454 aa13.25□□□□□ -0.29
USB1-211ENST00000565662 RAB22AQ9UL26 194 aa13.25□□□□□ -0.29
USB1-211ENST00000565662 METTL21EPA6NDL7 271 aa13.24□□□□□ -0.29
USB1-211ENST00000565662 HSPA12AO43301 675 aa13.24□□□□□ -0.29
USB1-211ENST00000565662 ATP6V1G2O95670 118 aa13.24□□□□□ -0.29
USB1-211ENST00000565662 VDAC1P21796 283 aa13.24□□□□□ -0.29
USB1-211ENST00000565662 PPP1CCP36873 323 aaKnown RBP13.24□□□□□ -0.29
USB1-211ENST00000565662 RPL23AP62750 156 aaKnown RBP13.24□□□□□ -0.29
USB1-211ENST00000565662 HLA-DRB3P79483 266 aa13.24□□□□□ -0.29
USB1-211ENST00000565662 DCTN2Q13561 401 aaKnown RBP13.24□□□□□ -0.29
USB1-211ENST00000565662 KIR2DS1Q14954 304 aa13.24□□□□□ -0.29
USB1-211ENST00000565662 MMDQ15546 238 aa13.24□□□□□ -0.29
USB1-211ENST00000565662 PNLIPRP3Q17RR3 467 aa13.24□□□□□ -0.29
USB1-211ENST00000565662 CXorf66Q5JRM2 361 aaPredicted RBP13.24□□□□□ -0.29
USB1-211ENST00000565662 CD200R1LQ6Q8B3 271 aa13.24□□□□□ -0.29
USB1-211ENST00000565662 FAM71E2Q8N5Q1 922 aa13.24□□□□□ -0.29
USB1-211ENST00000565662 UBALD1Q8TB05 177 aa13.24□□□□□ -0.29
USB1-211ENST00000565662 IL1F10Q8WWZ1 152 aa13.24□□□□□ -0.29
USB1-211ENST00000565662 PTX4Q96A99 478 aa13.24□□□□□ -0.29
USB1-211ENST00000565662 ZNF251Q9BRH9 671 aa13.24□□□□□ -0.29
USB1-211ENST00000565662 SLC23A1Q9UHI7 598 aa13.24□□□□□ -0.29
USB1-211ENST00000565662 AK6Q9Y3D8 172 aaKnown RBP13.24□□□□□ -0.29
USB1-211ENST00000565662 IGHV3-72A0A0B4J1Y9 119 aa13.23□□□□□ -0.29
USB1-211ENST00000565662 TRDV1A0A1B0GX56 115 aa13.23□□□□□ -0.29
USB1-211ENST00000565662 A0A1W2PRX2 142 aa13.23□□□□□ -0.29
USB1-211ENST00000565662 G3V4G9 280 aa13.23□□□□□ -0.29
USB1-211ENST00000565662 SLC31A2O15432 143 aa13.23□□□□□ -0.29
USB1-211ENST00000565662 DENRO43583 198 aaKnown RBP13.23□□□□□ -0.29
USB1-211ENST00000565662 IGF1P05019 195 aa13.23□□□□□ -0.29
USB1-211ENST00000565662 RAB6AP20340 208 aa13.23□□□□□ -0.29
USB1-211ENST00000565662 ZNF134P52741 427 aa13.23□□□□□ -0.29
USB1-211ENST00000565662 FABP5Q01469 135 aa13.23□□□□□ -0.29
USB1-211ENST00000565662 FOXE3Q13461 319 aa13.23□□□□□ -0.29
USB1-211ENST00000565662 OR10K2Q6IF99 312 aa13.23□□□□□ -0.29
USB1-211ENST00000565662 SETD6Q8TBK2 473 aa13.23□□□□□ -0.29
USB1-211ENST00000565662 SGCDQ92629 289 aa13.23□□□□□ -0.29
USB1-211ENST00000565662 RNF5Q99942 180 aa13.23□□□□□ -0.29
USB1-211ENST00000565662 CMSS1Q9BQ75 279 aaKnown RBP13.23□□□□□ -0.29
USB1-211ENST00000565662 NICN1Q9BSH3 213 aa13.23□□□□□ -0.29
USB1-211ENST00000565662 NUDT19A8MXV4 375 aa13.22□□□□□ -0.29
USB1-211ENST00000565662 HLA-DRB1P01911 266 aa13.22□□□□□ -0.29
USB1-211ENST00000565662 RAB3BP20337 219 aa13.22□□□□□ -0.29
USB1-211ENST00000565662 TCTEX1D4Q5JR98 221 aa13.22□□□□□ -0.29
USB1-211ENST00000565662 TCTEX1D1Q8N7M0 179 aa13.22□□□□□ -0.29
USB1-211ENST00000565662 RNF152Q8N8N0 203 aa13.22□□□□□ -0.29
USB1-211ENST00000565662 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.22□□□□□ -0.29
USB1-211ENST00000565662 OR52L2PQ8NGH6 319 aa13.22□□□□□ -0.29
USB1-211ENST00000565662 ZNF107Q9UII5 783 aaPredicted RBP13.22□□□□□ -0.29
USB1-211ENST00000565662 CMYA5Q8N3K9 4069 aa13.22□□□□□ -0.29
USB1-211ENST00000565662 SAA2-SAA4A0A096LPE2 208 aa13.21□□□□□ -0.29
USB1-211ENST00000565662 IFITM5A6NNB3 132 aa13.21□□□□□ -0.29
USB1-211ENST00000565662 NBR2O15453 112 aa13.21□□□□□ -0.29
USB1-211ENST00000565662 CD3GP09693 182 aa13.21□□□□□ -0.29
USB1-211ENST00000565662 SAA2P0DJI9 122 aaPredicted RBP13.21□□□□□ -0.29
USB1-211ENST00000565662 MYCNOSP40205 109 aa13.21□□□□□ -0.29
USB1-211ENST00000565662 MAP2K4P45985 399 aa13.21□□□□□ -0.29
USB1-211ENST00000565662 VEGFCP49767 419 aa13.21□□□□□ -0.29
USB1-211ENST00000565662 TAGLNQ01995 201 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms