RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 TNFRSF13BO14836 293 aaPredicted RBP11.45□□□□□ -0.58
TPM1-215ENST00000558868 YPEL1O60688 119 aa11.45□□□□□ -0.58
TPM1-215ENST00000558868 PET100P0DJ07 73 aa11.45□□□□□ -0.58
TPM1-215ENST00000558868 NDUFB7P17568 137 aa11.45□□□□□ -0.58
TPM1-215ENST00000558868 F2RP25116 425 aa11.45□□□□□ -0.58
TPM1-215ENST00000558868 UCP1P25874 307 aa11.45□□□□□ -0.58
TPM1-215ENST00000558868 PSMB6P28072 239 aa11.45□□□□□ -0.58
TPM1-215ENST00000558868 SSTR5P35346 364 aa11.45□□□□□ -0.58
TPM1-215ENST00000558868 Q5BKY6 102 aa11.45□□□□□ -0.58
TPM1-215ENST00000558868 C11orf71Q6IPW1 123 aa11.45□□□□□ -0.58
TPM1-215ENST00000558868 C11orf87Q6NUJ2 197 aa11.45□□□□□ -0.58
TPM1-215ENST00000558868 TGIF2LYQ8IUE0 185 aa11.45□□□□□ -0.58
TPM1-215ENST00000558868 ZNF695Q8IW36 515 aa11.45□□□□□ -0.58
TPM1-215ENST00000558868 FAM216BQ8N7L0 139 aa11.45□□□□□ -0.58
TPM1-215ENST00000558868 GRPEL2Q8TAA5 225 aa11.45□□□□□ -0.58
TPM1-215ENST00000558868 UBALD1Q8TB05 177 aa11.45□□□□□ -0.58
TPM1-215ENST00000558868 PPP1R1CQ8WVI7 109 aa11.45□□□□□ -0.58
TPM1-215ENST00000558868 MSI2Q96DH6 328 aaKnown RBP11.45□□□□□ -0.58
TPM1-215ENST00000558868 C18orf12Q96KH6 178 aa11.45□□□□□ -0.58
TPM1-215ENST00000558868 TMEM56Q96MV1 263 aa11.45□□□□□ -0.58
TPM1-215ENST00000558868 YPEL2Q96QA6 119 aa11.45□□□□□ -0.58
TPM1-215ENST00000558868 TP53RKQ96S44 253 aa11.45□□□□□ -0.58
TPM1-215ENST00000558868 ZFP57Q9NU63 452 aa11.45□□□□□ -0.58
TPM1-215ENST00000558868 LIN7CQ9NUP9 197 aaKnown RBP11.45□□□□□ -0.58
TPM1-215ENST00000558868 TAS2R3Q9NYW6 316 aa11.45□□□□□ -0.58
TPM1-215ENST00000558868 PRR13Q9NZ81 148 aa11.45□□□□□ -0.58
TPM1-215ENST00000558868 GNG12Q9UBI6 72 aa11.45□□□□□ -0.58
TPM1-215ENST00000558868 CLN8Q9UBY8 286 aa11.45□□□□□ -0.58
TPM1-215ENST00000558868 TMEM56-RWDD3S4R434 201 aa11.45□□□□□ -0.58
TPM1-215ENST00000558868 CACNA1DQ01668 2161 aa11.44□□□□□ -0.58
TPM1-215ENST00000558868 ITGB1BP1O14713 200 aa11.44□□□□□ -0.58
TPM1-215ENST00000558868 ADAM20O43506 726 aa11.44□□□□□ -0.58
TPM1-215ENST00000558868 CGB3P0DN86 165 aa11.44□□□□□ -0.58
TPM1-215ENST00000558868 CGB7P0DN87 165 aa11.44□□□□□ -0.58
TPM1-215ENST00000558868 IAH1Q2TAA2 248 aaPredicted RBP11.44□□□□□ -0.58
TPM1-215ENST00000558868 LGALSLQ3ZCW2 172 aaPredicted RBP11.44□□□□□ -0.58
TPM1-215ENST00000558868 GGNBP1Q5YKI7 109 aa11.44□□□□□ -0.58
TPM1-215ENST00000558868 TCTEX1D1Q8N7M0 179 aa11.44□□□□□ -0.58
TPM1-215ENST00000558868 OR10A7Q8NGE5 316 aa11.44□□□□□ -0.58
TPM1-215ENST00000558868 RFESDQ8TAC1 157 aa11.44□□□□□ -0.58
TPM1-215ENST00000558868 WDR89Q96FK6 387 aaPredicted RBP11.44□□□□□ -0.58
TPM1-215ENST00000558868 SPIN2AQ99865 258 aa11.44□□□□□ -0.58
TPM1-215ENST00000558868 SPIN2BQ9BPZ2 258 aa11.44□□□□□ -0.58
TPM1-215ENST00000558868 DCTN5Q9BTE1 182 aa11.44□□□□□ -0.58
TPM1-215ENST00000558868 GAL3ST2Q9H3Q3 398 aa11.44□□□□□ -0.58
TPM1-215ENST00000558868 PLEKHF2Q9H8W4 249 aa11.44□□□□□ -0.58
TPM1-215ENST00000558868 LINC00574Q9H8X3 128 aa11.44□□□□□ -0.58
TPM1-215ENST00000558868 PLSCR3Q9NRY6 295 aa11.44□□□□□ -0.58
TPM1-215ENST00000558868 PAIP2BQ9ULR5 123 aaKnown RBP11.44□□□□□ -0.58
TPM1-215ENST00000558868 BOLA1Q9Y3E2 137 aa11.44□□□□□ -0.58
TPM1-215ENST00000558868 LINC00312Q9Y6C7 94 aa11.44□□□□□ -0.58
TPM1-215ENST00000558868 NBASA2RRP1 2371 aa11.43□□□□□ -0.58
TPM1-215ENST00000558868 HIVEP3Q5T1R4 2406 aa11.43□□□□□ -0.58
TPM1-215ENST00000558868 TRAV14DV4A0A0A6YYC5 116 aa11.43□□□□□ -0.58
TPM1-215ENST00000558868 A6NNC1 897 aa11.43□□□□□ -0.58
TPM1-215ENST00000558868 RGS13O14921 159 aa11.43□□□□□ -0.58
TPM1-215ENST00000558868 MPC2O95563 127 aa11.43□□□□□ -0.58
TPM1-215ENST00000558868 CDS2O95674 445 aa11.43□□□□□ -0.58
TPM1-215ENST00000558868 SERPINE2P07093 398 aa11.43□□□□□ -0.58
TPM1-215ENST00000558868 DANCRP0C864 163 aa11.43□□□□□ -0.58
TPM1-215ENST00000558868 SELLP14151 372 aa11.43□□□□□ -0.58
TPM1-215ENST00000558868 RPA2P15927 270 aa11.43□□□□□ -0.58
TPM1-215ENST00000558868 PPP1CCP36873 323 aaKnown RBP11.43□□□□□ -0.58
TPM1-215ENST00000558868 RAB7AP51149 207 aa11.43□□□□□ -0.58
TPM1-215ENST00000558868 RIPPLY3P57055 190 aa11.43□□□□□ -0.58
TPM1-215ENST00000558868 CATR1Q13166 79 aa11.43□□□□□ -0.58
TPM1-215ENST00000558868 SMCO1Q147U7 214 aa11.43□□□□□ -0.58
TPM1-215ENST00000558868 TMEM268Q5VZI3 342 aa11.43□□□□□ -0.58
TPM1-215ENST00000558868 MEX3BQ6ZN04 569 aaKnown RBP11.43□□□□□ -0.58
TPM1-215ENST00000558868 ZNF546Q86UE3 836 aa11.43□□□□□ -0.58
TPM1-215ENST00000558868 DRAM1Q8N682 238 aa11.43□□□□□ -0.58
TPM1-215ENST00000558868 OR52M1Q8NGK5 317 aa11.43□□□□□ -0.58
TPM1-215ENST00000558868 RBPMSQ93062 196 aaKnown RBP11.43□□□□□ -0.58
TPM1-215ENST00000558868 TIMD4Q96H15 378 aa11.43□□□□□ -0.58
TPM1-215ENST00000558868 OR2D2Q9H210 308 aa11.43□□□□□ -0.58
TPM1-215ENST00000558868 KLF2Q9Y5W3 355 aaPredicted RBP11.43□□□□□ -0.58
TPM1-215ENST00000558868 A0A0D9SG52 128 aa11.42□□□□□ -0.58
TPM1-215ENST00000558868 A0A1B0GW55 424 aa11.42□□□□□ -0.58
TPM1-215ENST00000558868 ARPC5O15511 151 aa11.42□□□□□ -0.58
TPM1-215ENST00000558868 TNFSF12O43508 249 aa11.42□□□□□ -0.58
TPM1-215ENST00000558868 RLN2P04090 185 aa11.42□□□□□ -0.58
TPM1-215ENST00000558868 DUX4L2P0CJ85 424 aa11.42□□□□□ -0.58
TPM1-215ENST00000558868 DUX4L3P0CJ86 424 aa11.42□□□□□ -0.58
TPM1-215ENST00000558868 DUX4L4P0CJ87 422 aa11.42□□□□□ -0.58
TPM1-215ENST00000558868 DUX4L5P0CJ88 424 aa11.42□□□□□ -0.58
TPM1-215ENST00000558868 DUX4L6P0CJ89 424 aa11.42□□□□□ -0.58
TPM1-215ENST00000558868 DUX4L7P0CJ90 424 aa11.42□□□□□ -0.58
TPM1-215ENST00000558868 NUP62P37198 522 aaPredicted RBP11.42□□□□□ -0.58
TPM1-215ENST00000558868 GNMTQ14749 295 aa11.42□□□□□ -0.58
TPM1-215ENST00000558868 C17orf58Q2M2W7 97 aa11.42□□□□□ -0.58
TPM1-215ENST00000558868 MORN2Q502X0 79 aa11.42□□□□□ -0.58
TPM1-215ENST00000558868 DUX4L9Q6RFH8 374 aaPredicted RBP11.42□□□□□ -0.58
TPM1-215ENST00000558868 ZNF66Q6ZN08 573 aa11.42□□□□□ -0.58
TPM1-215ENST00000558868 LYZL2Q7Z4W2 148 aa11.42□□□□□ -0.58
TPM1-215ENST00000558868 SELENOHQ8IZQ5 122 aaKnown RBP11.42□□□□□ -0.58
TPM1-215ENST00000558868 INO80EQ8NBZ0 244 aaPredicted RBP11.42□□□□□ -0.58
TPM1-215ENST00000558868 RAB1CQ92928 201 aa11.42□□□□□ -0.58
TPM1-215ENST00000558868 RAB39BQ96DA2 213 aa11.42□□□□□ -0.58
TPM1-215ENST00000558868 OR10C1Q96KK4 312 aa11.42□□□□□ -0.58
TPM1-215ENST00000558868 MFFQ9GZY8 342 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms