RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 LINC01548A6NM66 108 aa12.73□□□□□ -0.37
DDX55-212ENST00000544738 ZNF736B4DX44 427 aaPredicted RBP12.73□□□□□ -0.37
DDX55-212ENST00000544738 ANKRD65E5RJM6 399 aa12.73□□□□□ -0.37
DDX55-212ENST00000544738 YPEL1O60688 119 aa12.73□□□□□ -0.37
DDX55-212ENST00000544738 UCHL1P09936 223 aa12.73□□□□□ -0.37
DDX55-212ENST00000544738 CD37P11049 281 aa12.73□□□□□ -0.37
DDX55-212ENST00000544738 LYL1P12980 280 aa12.73□□□□□ -0.37
DDX55-212ENST00000544738 CHATP28329 748 aa12.73□□□□□ -0.37
DDX55-212ENST00000544738 SOX6P35712 828 aa12.73□□□□□ -0.37
DDX55-212ENST00000544738 FAM27D1Q5T7N8 215 aa12.73□□□□□ -0.37
DDX55-212ENST00000544738 ZNF695Q8IW36 515 aa12.73□□□□□ -0.37
DDX55-212ENST00000544738 FAM71E2Q8N5Q1 922 aa12.73□□□□□ -0.37
DDX55-212ENST00000544738 KLHL30-AS1Q8NEE0 82 aa12.73□□□□□ -0.37
DDX55-212ENST00000544738 UFD1Q92890 307 aa12.73□□□□□ -0.37
DDX55-212ENST00000544738 YPEL2Q96QA6 119 aa12.73□□□□□ -0.37
DDX55-212ENST00000544738 ABHD14AQ9BUJ0 271 aa12.73□□□□□ -0.37
DDX55-212ENST00000544738 PALMDQ9NP74 551 aa12.73□□□□□ -0.37
DDX55-212ENST00000544738 ABRACLQ9P1F3 81 aa12.73□□□□□ -0.37
DDX55-212ENST00000544738 SLC22A1O15245 554 aa12.72□□□□□ -0.37
DDX55-212ENST00000544738 BPNT1O95861 308 aa12.72□□□□□ -0.37
DDX55-212ENST00000544738 PPP1CCP36873 323 aaKnown RBP12.72□□□□□ -0.37
DDX55-212ENST00000544738 DGCR2P98153 550 aa12.72□□□□□ -0.37
DDX55-212ENST00000544738 LSAMPQ13449 338 aa12.72□□□□□ -0.37
DDX55-212ENST00000544738 IRF3Q14653 427 aa12.72□□□□□ -0.37
DDX55-212ENST00000544738 TRAM1Q15629 374 aa12.72□□□□□ -0.37
DDX55-212ENST00000544738 CXorf66Q5JRM2 361 aaPredicted RBP12.72□□□□□ -0.37
DDX55-212ENST00000544738 OR10K2Q6IF99 312 aa12.72□□□□□ -0.37
DDX55-212ENST00000544738 ETV3LQ6ZN32 361 aa12.72□□□□□ -0.37
DDX55-212ENST00000544738 C8orf86Q6ZUL3 223 aa12.72□□□□□ -0.37
DDX55-212ENST00000544738 OR52L2PQ8NGH6 319 aa12.72□□□□□ -0.37
DDX55-212ENST00000544738 OR6M1Q8NGM8 313 aa12.72□□□□□ -0.37
DDX55-212ENST00000544738 SULT4A1Q9BR01 284 aa12.72□□□□□ -0.37
DDX55-212ENST00000544738 CHCHD6Q9BRQ6 235 aa12.72□□□□□ -0.37
DDX55-212ENST00000544738 FAAP24Q9BTP7 215 aa12.72□□□□□ -0.37
DDX55-212ENST00000544738 TM2D1Q9BX74 207 aa12.72□□□□□ -0.37
DDX55-212ENST00000544738 NKX1-2Q9UD57 310 aaPredicted RBP12.72□□□□□ -0.37
DDX55-212ENST00000544738 ZNF580Q9UK33 172 aa12.72□□□□□ -0.37
DDX55-212ENST00000544738 ELANEP08246 267 aa12.71□□□□□ -0.37
DDX55-212ENST00000544738 OR5H8P0DN80 308 aa12.71□□□□□ -0.37
DDX55-212ENST00000544738 F2RL1P55085 397 aa12.71□□□□□ -0.37
DDX55-212ENST00000544738 AQP4P55087 323 aa12.71□□□□□ -0.37
DDX55-212ENST00000544738 FOXE3Q13461 319 aa12.71□□□□□ -0.37
DDX55-212ENST00000544738 TPBGQ13641 420 aa12.71□□□□□ -0.37
DDX55-212ENST00000544738 GNMTQ14749 295 aa12.71□□□□□ -0.37
DDX55-212ENST00000544738 HMGN3Q15651 99 aa12.71□□□□□ -0.37
DDX55-212ENST00000544738 LIPKQ5VXJ0 399 aa12.71□□□□□ -0.37
DDX55-212ENST00000544738 C6orf201Q7Z4U5 140 aa12.71□□□□□ -0.37
DDX55-212ENST00000544738 OR2AK2Q8NG84 335 aa12.71□□□□□ -0.37
DDX55-212ENST00000544738 P2RX4Q99571 388 aa12.71□□□□□ -0.37
DDX55-212ENST00000544738 RIMS4Q9H426 269 aaPredicted RBP12.71□□□□□ -0.37
DDX55-212ENST00000544738 DUSP21Q9H596 190 aa12.71□□□□□ -0.37
DDX55-212ENST00000544738 ISYNA1Q9NPH2 558 aa12.71□□□□□ -0.37
DDX55-212ENST00000544738 PLEKHJ1Q9NW61 149 aa12.71□□□□□ -0.37
DDX55-212ENST00000544738 ZMAT5Q9UDW3 170 aaKnown RBP12.71□□□□□ -0.37
DDX55-212ENST00000544738 STEAP1Q9UHE8 339 aa12.71□□□□□ -0.37
DDX55-212ENST00000544738 TMEM14DPA8MWL7 114 aa12.7□□□□□ -0.38
DDX55-212ENST00000544738 RGS10O43665 173 aa12.7□□□□□ -0.38
DDX55-212ENST00000544738 ARL6IP5O75915 188 aa12.7□□□□□ -0.38
DDX55-212ENST00000544738 NAPSAO96009 420 aa12.7□□□□□ -0.38
DDX55-212ENST00000544738 IGF1P05019 195 aa12.7□□□□□ -0.38
DDX55-212ENST00000544738 VDAC1P21796 283 aa12.7□□□□□ -0.38
DDX55-212ENST00000544738 PSMA1P25786 263 aaKnown RBP12.7□□□□□ -0.38
DDX55-212ENST00000544738 BLVRBP30043 206 aaPredicted RBP12.7□□□□□ -0.38
DDX55-212ENST00000544738 RANBP1P43487 201 aa12.7□□□□□ -0.38
DDX55-212ENST00000544738 CDX1P47902 265 aaPredicted RBP12.7□□□□□ -0.38
DDX55-212ENST00000544738 QRFPP83859 136 aa12.7□□□□□ -0.38
DDX55-212ENST00000544738 UNC119Q13432 240 aa12.7□□□□□ -0.38
DDX55-212ENST00000544738 MMDQ15546 238 aa12.7□□□□□ -0.38
DDX55-212ENST00000544738 MOB1BQ7L9L4 216 aa12.7□□□□□ -0.38
DDX55-212ENST00000544738 RNF152Q8N8N0 203 aa12.7□□□□□ -0.38
DDX55-212ENST00000544738 TMEM203Q969S6 136 aa12.7□□□□□ -0.38
DDX55-212ENST00000544738 URM1Q9BTM9 101 aaKnown RBP12.7□□□□□ -0.38
DDX55-212ENST00000544738 CHMP1AQ9HD42 196 aaPredicted RBP12.7□□□□□ -0.38
DDX55-212ENST00000544738 ZNF107Q9UII5 783 aaPredicted RBP12.7□□□□□ -0.38
DDX55-212ENST00000544738 LSM4Q9Y4Z0 139 aaKnown RBP12.7□□□□□ -0.38
DDX55-212ENST00000544738 IGHG4P01861 327 aa12.69□□□□□ -0.38
DDX55-212ENST00000544738 RPLP1P05386 114 aaKnown RBP12.69□□□□□ -0.38
DDX55-212ENST00000544738 HSMCR30P0CW71 290 aa12.69□□□□□ -0.38
DDX55-212ENST00000544738 ARSBP15848 533 aa12.69□□□□□ -0.38
DDX55-212ENST00000544738 MYF6P23409 242 aa12.69□□□□□ -0.38
DDX55-212ENST00000544738 C18orf65Q6ZTR6 163 aa12.69□□□□□ -0.38
DDX55-212ENST00000544738 ODF3L1Q8IXM7 274 aa12.69□□□□□ -0.38
DDX55-212ENST00000544738 SVOPQ8N4V2 548 aa12.69□□□□□ -0.38
DDX55-212ENST00000544738 OR8U1Q8NH10 309 aa12.69□□□□□ -0.38
DDX55-212ENST00000544738 NRG4Q8WWG1 115 aa12.69□□□□□ -0.38
DDX55-212ENST00000544738 IL1F10Q8WWZ1 152 aa12.69□□□□□ -0.38
DDX55-212ENST00000544738 NABP2Q9BQ15 211 aa12.69□□□□□ -0.38
DDX55-212ENST00000544738 HSPB9Q9BQS6 159 aa12.69□□□□□ -0.38
DDX55-212ENST00000544738 ZNF251Q9BRH9 671 aa12.69□□□□□ -0.38
DDX55-212ENST00000544738 NICN1Q9BSH3 213 aa12.69□□□□□ -0.38
DDX55-212ENST00000544738 ANKRD60Q9BZ19 345 aa12.69□□□□□ -0.38
DDX55-212ENST00000544738 VCX3BQ9H321 246 aa12.69□□□□□ -0.38
DDX55-212ENST00000544738 GHITMQ9H3K2 345 aa12.69□□□□□ -0.38
DDX55-212ENST00000544738 PLGRKTQ9HBL7 147 aa12.69□□□□□ -0.38
DDX55-212ENST00000544738 PIPOXQ9P0Z9 390 aa12.69□□□□□ -0.38
DDX55-212ENST00000544738 MGAT4AQ9UM21 535 aa12.69□□□□□ -0.38
DDX55-212ENST00000544738 CCL24O00175 119 aa12.68□□□□□ -0.38
DDX55-212ENST00000544738 SLC17A2O00624 439 aa12.68□□□□□ -0.38
DDX55-212ENST00000544738 ACTBP60709 375 aa12.68□□□□□ -0.38
DDX55-212ENST00000544738 KIR2DS1Q14954 304 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms