RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 NMNAT1Q9HAN9 279 aaPredicted RBP6.31□□□□□ -1.4
GNE-205ENST00000539815 RPS10P5Q9NQ39 176 aa6.31□□□□□ -1.4
GNE-205ENST00000539815 C1RLQ9NZP8 487 aa6.31□□□□□ -1.4
GNE-205ENST00000539815 SEC14L6B5MCN3 397 aa6.3□□□□□ -1.4
GNE-205ENST00000539815 TRAPPC2LH3BP13 241 aa6.3□□□□□ -1.4
GNE-205ENST00000539815 HPRP00739 348 aa6.3□□□□□ -1.4
GNE-205ENST00000539815 EPHA2P29317 976 aa6.3□□□□□ -1.4
GNE-205ENST00000539815 RPL31P62899 125 aaKnown RBP6.3□□□□□ -1.4
GNE-205ENST00000539815 ASB10Q8WXI3 467 aa6.3□□□□□ -1.4
GNE-205ENST00000539815 PINX1Q96BK5 328 aaKnown RBP6.3□□□□□ -1.4
GNE-205ENST00000539815 SAT2Q96F10 170 aaPredicted RBP6.3□□□□□ -1.4
GNE-205ENST00000539815 TP53RKQ96S44 253 aa6.3□□□□□ -1.4
GNE-205ENST00000539815 PGPEP1Q9NXJ5 209 aa6.3□□□□□ -1.4
GNE-205ENST00000539815 RHCGQ9UBD6 479 aa6.3□□□□□ -1.4
GNE-205ENST00000539815 RNF150Q9ULK6 438 aa6.3□□□□□ -1.4
GNE-205ENST00000539815 A0A1B0GW55 424 aa6.3□□□□□ -1.4
GNE-205ENST00000539815 LANCL1O43813 399 aa6.3□□□□□ -1.4
GNE-205ENST00000539815 DUX4L2P0CJ85 424 aa6.3□□□□□ -1.4
GNE-205ENST00000539815 DUX4L3P0CJ86 424 aa6.3□□□□□ -1.4
GNE-205ENST00000539815 DUX4L4P0CJ87 422 aa6.3□□□□□ -1.4
GNE-205ENST00000539815 DUX4L5P0CJ88 424 aa6.3□□□□□ -1.4
GNE-205ENST00000539815 DUX4L6P0CJ89 424 aa6.3□□□□□ -1.4
GNE-205ENST00000539815 DUX4L7P0CJ90 424 aa6.3□□□□□ -1.4
GNE-205ENST00000539815 PGA4P0DJD7 388 aa6.3□□□□□ -1.4
GNE-205ENST00000539815 PGA3P0DJD8 388 aa6.3□□□□□ -1.4
GNE-205ENST00000539815 RAB7AP51149 207 aa6.3□□□□□ -1.4
GNE-205ENST00000539815 PHYHD1Q5SRE7 291 aa6.3□□□□□ -1.4
GNE-205ENST00000539815 SLC35E4Q6ICL7 350 aa6.3□□□□□ -1.4
GNE-205ENST00000539815 VMO1Q7Z5L0 202 aa6.3□□□□□ -1.4
GNE-205ENST00000539815 TMEM179BQ7Z7N9 219 aa6.3□□□□□ -1.4
GNE-205ENST00000539815 HIST3H2BBQ8N257 126 aa6.3□□□□□ -1.4
GNE-205ENST00000539815 PAQR4Q8N4S7 273 aaPredicted RBP6.3□□□□□ -1.4
GNE-205ENST00000539815 TMEM54Q969K7 222 aa6.3□□□□□ -1.4
GNE-205ENST00000539815 MRGPRFQ96AM1 343 aa6.3□□□□□ -1.4
GNE-205ENST00000539815 SPXQ9BT56 116 aa6.3□□□□□ -1.4
GNE-205ENST00000539815 GCM1Q9NP62 436 aa6.3□□□□□ -1.4
GNE-205ENST00000539815 DUX4Q9UBX2 424 aa6.3□□□□□ -1.4
GNE-205ENST00000539815 WDFY3Q8IZQ1 3526 aa6.3□□□□□ -1.4
GNE-205ENST00000539815 MXRA5Q9NR99 2828 aa6.3□□□□□ -1.4
GNE-205ENST00000539815 ELOA3CA0A087WX78 387 aaPredicted RBP6.3□□□□□ -1.4
GNE-205ENST00000539815 RER1O15258 196 aa6.3□□□□□ -1.4
GNE-205ENST00000539815 GNG7O60262 68 aa6.3□□□□□ -1.4
GNE-205ENST00000539815 HLA-DQB1P01920 261 aa6.3□□□□□ -1.4
GNE-205ENST00000539815 MRPL19P49406 292 aaKnown RBP6.3□□□□□ -1.4
GNE-205ENST00000539815 RIPPLY1Q0D2K3 151 aa6.3□□□□□ -1.4
GNE-205ENST00000539815 DNLZQ5SXM8 178 aa6.3□□□□□ -1.4
GNE-205ENST00000539815 C10orf91Q5T1B1 145 aa6.3□□□□□ -1.4
GNE-205ENST00000539815 C8orf82Q6P1X6 216 aaPredicted RBP6.3□□□□□ -1.4
GNE-205ENST00000539815 COLCA1Q6ZS62 124 aa6.3□□□□□ -1.4
GNE-205ENST00000539815 TMEM144Q7Z5S9 345 aa6.3□□□□□ -1.4
GNE-205ENST00000539815 OR52J3Q8NH60 311 aa6.3□□□□□ -1.4
GNE-205ENST00000539815 FBLIM1Q8WUP2 373 aa6.3□□□□□ -1.4
GNE-205ENST00000539815 FAM46BQ96A09 425 aa6.3□□□□□ -1.4
GNE-205ENST00000539815 PCNX3Q9H6A9 2034 aa6.3□□□□□ -1.4
GNE-205ENST00000539815 FXYD6-FXYD2A0A087WZ82 144 aa6.29□□□□□ -1.4
GNE-205ENST00000539815 UNC119BA6NIH7 251 aa6.29□□□□□ -1.4
GNE-205ENST00000539815 F6UZH7 168 aa6.29□□□□□ -1.4
GNE-205ENST00000539815 TSPAN15O95858 294 aa6.29□□□□□ -1.4
GNE-205ENST00000539815 CAV3P56539 151 aa6.29□□□□□ -1.4
GNE-205ENST00000539815 PAX8Q06710 450 aa6.29□□□□□ -1.4
GNE-205ENST00000539815 GUK1Q16774 197 aa6.29□□□□□ -1.4
GNE-205ENST00000539815 OCIAD2Q56VL3 154 aa6.29□□□□□ -1.4
GNE-205ENST00000539815 CLEC12AQ5QGZ9 265 aa6.29□□□□□ -1.4
GNE-205ENST00000539815 TEX38Q6PEX7 206 aa6.29□□□□□ -1.4
GNE-205ENST00000539815 CNIH2Q6PI25 160 aa6.29□□□□□ -1.4
GNE-205ENST00000539815 OR5M8Q8NGP6 311 aa6.29□□□□□ -1.4
GNE-205ENST00000539815 OR4K15Q8NH41 348 aa6.29□□□□□ -1.4
GNE-205ENST00000539815 C5orf30Q96GV9 206 aa6.29□□□□□ -1.4
GNE-205ENST00000539815 OR4C12Q96R67 309 aa6.29□□□□□ -1.4
GNE-205ENST00000539815 POLR2J2Q9GZM3 115 aaKnown RBP6.29□□□□□ -1.4
GNE-205ENST00000539815 FXYD6Q9H0Q3 95 aa6.29□□□□□ -1.4
GNE-205ENST00000539815 POLR2J3Q9H1A7 115 aaKnown RBP6.29□□□□□ -1.4
GNE-205ENST00000539815 WFDC1Q9HC57 220 aa6.29□□□□□ -1.4
GNE-205ENST00000539815 POLDIP2Q9Y2S7 368 aa6.29□□□□□ -1.4
GNE-205ENST00000539815 EXOSC1Q9Y3B2 195 aaKnown RBP6.29□□□□□ -1.4
GNE-205ENST00000539815 PRSS37A4D1T9 235 aa6.29□□□□□ -1.4
GNE-205ENST00000539815 PPP1R2P9O14990 202 aa6.29□□□□□ -1.4
GNE-205ENST00000539815 RBMXL2O75526 392 aaKnown RBP6.29□□□□□ -1.4
GNE-205ENST00000539815 SEC61A1P61619 476 aaKnown RBP6.29□□□□□ -1.4
GNE-205ENST00000539815 CRMP1Q14194 572 aa6.29□□□□□ -1.4
GNE-205ENST00000539815 PLCXD3Q63HM9 321 aa6.29□□□□□ -1.4
GNE-205ENST00000539815 Q6YL49 198 aa6.29□□□□□ -1.4
GNE-205ENST00000539815 MOB3CQ70IA8 216 aa6.29□□□□□ -1.4
GNE-205ENST00000539815 FAM57BQ71RH2 274 aa6.29□□□□□ -1.4
GNE-205ENST00000539815 SIGLEC11Q96RL6 698 aa6.29□□□□□ -1.4
GNE-205ENST00000539815 PHB2Q99623 299 aa6.29□□□□□ -1.4
GNE-205ENST00000539815 FN3KQ9H479 309 aa6.29□□□□□ -1.4
GNE-205ENST00000539815 RHOFQ9HBH0 211 aa6.29□□□□□ -1.4
GNE-205ENST00000539815 SDR39U1Q9NRG7 319 aaPredicted RBP6.29□□□□□ -1.4
GNE-205ENST00000539815 NCKAP5O14513 1909 aa6.29□□□□□ -1.4
GNE-205ENST00000539815 A0A0A6YYH2 397 aa6.29□□□□□ -1.4
GNE-205ENST00000539815 SMCO3A2RU48 225 aa6.29□□□□□ -1.4
GNE-205ENST00000539815 A6NJ64 397 aa6.29□□□□□ -1.4
GNE-205ENST00000539815 FAM183AA6NL82 134 aa6.29□□□□□ -1.4
GNE-205ENST00000539815 RNASEK-C17orf49H0YIS7 233 aa6.29□□□□□ -1.4
GNE-205ENST00000539815 NPIPB7O75200 414 aa6.29□□□□□ -1.4
GNE-205ENST00000539815 GGCTO75223 188 aaKnown RBP6.29□□□□□ -1.4
GNE-205ENST00000539815 HSD17B1P14061 328 aa6.29□□□□□ -1.4
GNE-205ENST00000539815 GLP1RP43220 463 aa6.29□□□□□ -1.4
GNE-205ENST00000539815 CD81P60033 236 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms