RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 TMEM30BQ3MIR4 351 aa10.31□□□□□ -0.76
VEGFA-224ENST00000523873 DRAM1Q8N682 238 aa10.31□□□□□ -0.76
VEGFA-224ENST00000523873 C8orf31Q8N9H6 132 aa10.31□□□□□ -0.76
VEGFA-224ENST00000523873 S100A16Q96FQ6 103 aaKnown RBP10.31□□□□□ -0.76
VEGFA-224ENST00000523873 ABHD14AQ9BUJ0 271 aa10.31□□□□□ -0.76
VEGFA-224ENST00000523873 ST6GALNAC5Q9BVH7 336 aa10.31□□□□□ -0.76
VEGFA-224ENST00000523873 C1RLQ9NZP8 487 aa10.31□□□□□ -0.76
VEGFA-224ENST00000523873 TCF19Q9Y242 345 aa10.31□□□□□ -0.76
VEGFA-224ENST00000523873 A0A0A6YYH2 397 aa10.3□□□□□ -0.76
VEGFA-224ENST00000523873 IGHV3-72A0A0B4J1Y9 119 aa10.3□□□□□ -0.76
VEGFA-224ENST00000523873 A6NDX4 124 aa10.3□□□□□ -0.76
VEGFA-224ENST00000523873 A6NJ64 397 aa10.3□□□□□ -0.76
VEGFA-224ENST00000523873 TIMM23O14925 209 aa10.3□□□□□ -0.76
VEGFA-224ENST00000523873 BET1O15155 118 aa10.3□□□□□ -0.76
VEGFA-224ENST00000523873 HSPA12AO43301 675 aa10.3□□□□□ -0.76
VEGFA-224ENST00000523873 XRCC3O43542 346 aa10.3□□□□□ -0.76
VEGFA-224ENST00000523873 HKR1P10072 659 aa10.3□□□□□ -0.76
VEGFA-224ENST00000523873 DTYMKP23919 212 aa10.3□□□□□ -0.76
VEGFA-224ENST00000523873 CEACAM6P40199 344 aa10.3□□□□□ -0.76
VEGFA-224ENST00000523873 Q3ZCU0 254 aa10.3□□□□□ -0.76
VEGFA-224ENST00000523873 TMEM69Q5SWH9 247 aa10.3□□□□□ -0.76
VEGFA-224ENST00000523873 STEAP3Q658P3 488 aa10.3□□□□□ -0.76
VEGFA-224ENST00000523873 ODF3L1Q8IXM7 274 aa10.3□□□□□ -0.76
VEGFA-224ENST00000523873 GVQW1Q8N7I0 195 aa10.3□□□□□ -0.76
VEGFA-224ENST00000523873 OR4A4PQ8NGN8 299 aa10.3□□□□□ -0.76
VEGFA-224ENST00000523873 OR56B4Q8NH76 319 aa10.3□□□□□ -0.76
VEGFA-224ENST00000523873 DYNC2LI1Q8TCX1 351 aa10.3□□□□□ -0.76
VEGFA-224ENST00000523873 CAPSLQ8WWF8 208 aa10.3□□□□□ -0.76
VEGFA-224ENST00000523873 ACOT12Q8WYK0 555 aa10.3□□□□□ -0.76
VEGFA-224ENST00000523873 CFHR4Q92496 578 aa10.3□□□□□ -0.76
VEGFA-224ENST00000523873 ST6GALNAC6Q969X2 333 aa10.3□□□□□ -0.76
VEGFA-224ENST00000523873 CREB3L1Q96BA8 519 aa10.3□□□□□ -0.76
VEGFA-224ENST00000523873 BCL7BQ9BQE9 202 aa10.3□□□□□ -0.76
VEGFA-224ENST00000523873 RBM38Q9H0Z9 239 aaKnown RBP10.3□□□□□ -0.76
VEGFA-224ENST00000523873 MGAT4AQ9UM21 535 aa10.3□□□□□ -0.76
VEGFA-224ENST00000523873 TMEM89A2RUT3 159 aa10.29□□□□□ -0.76
VEGFA-224ENST00000523873 POM121CA8CG34 1229 aa10.29□□□□□ -0.76
VEGFA-224ENST00000523873 FAM25AB3EWG3 89 aa10.29□□□□□ -0.76
VEGFA-224ENST00000523873 FAM25CB3EWG5 89 aa10.29□□□□□ -0.76
VEGFA-224ENST00000523873 FAM25GB3EWG6 89 aa10.29□□□□□ -0.76
VEGFA-224ENST00000523873 RGS11O94810 467 aa10.29□□□□□ -0.76
VEGFA-224ENST00000523873 CRYBA1P05813 215 aa10.29□□□□□ -0.76
VEGFA-224ENST00000523873 SNRNP70P08621 437 aaKnown RBP10.29□□□□□ -0.76
VEGFA-224ENST00000523873 ZBTB25P24278 435 aa10.29□□□□□ -0.76
VEGFA-224ENST00000523873 IL3RAP26951 378 aa10.29□□□□□ -0.76
VEGFA-224ENST00000523873 MNDAP41218 407 aa10.29□□□□□ -0.76
VEGFA-224ENST00000523873 KIR2DS4P43632 304 aa10.29□□□□□ -0.76
VEGFA-224ENST00000523873 OR3A3P47888 321 aa10.29□□□□□ -0.76
VEGFA-224ENST00000523873 DYNLT3P51808 116 aa10.29□□□□□ -0.76
VEGFA-224ENST00000523873 ZNF816Q0VGE8 651 aaPredicted RBP10.29□□□□□ -0.76
VEGFA-224ENST00000523873 KIR2DS1Q14954 304 aa10.29□□□□□ -0.76
VEGFA-224ENST00000523873 DHRS7BQ6IAN0 325 aaPredicted RBP10.29□□□□□ -0.76
VEGFA-224ENST00000523873 MZT2AQ6P582 158 aa10.29□□□□□ -0.76
VEGFA-224ENST00000523873 MOB3BQ86TA1 216 aa10.29□□□□□ -0.76
VEGFA-224ENST00000523873 OR2AK2Q8NG84 335 aa10.29□□□□□ -0.76
VEGFA-224ENST00000523873 AP3S1Q92572 193 aa10.29□□□□□ -0.76
VEGFA-224ENST00000523873 ABHD14BQ96IU4 210 aa10.29□□□□□ -0.76
VEGFA-224ENST00000523873 CABLES2Q9BTV7 478 aa10.29□□□□□ -0.76
VEGFA-224ENST00000523873 C11orf54Q9H0W9 315 aaPredicted RBP10.29□□□□□ -0.76
VEGFA-224ENST00000523873 MIXL1Q9H2W2 232 aa10.29□□□□□ -0.76
VEGFA-224ENST00000523873 IFI27L2Q9H2X8 130 aa10.29□□□□□ -0.76
VEGFA-224ENST00000523873 RDH8Q9NYR8 311 aa10.29□□□□□ -0.76
VEGFA-224ENST00000523873 RNF150Q9ULK6 438 aa10.29□□□□□ -0.76
VEGFA-224ENST00000523873 MRPS7Q9Y2R9 242 aaKnown RBP10.29□□□□□ -0.76
VEGFA-224ENST00000523873 FBN1P35555 2871 aaKnown RBP10.29□□□□□ -0.76
VEGFA-224ENST00000523873 SAA2-SAA4A0A096LPE2 208 aa10.28□□□□□ -0.76
VEGFA-224ENST00000523873 IGHV1-3A0A0C4DH29 117 aa10.28□□□□□ -0.76
VEGFA-224ENST00000523873 OOSP1A8MZH6 123 aa10.28□□□□□ -0.76
VEGFA-224ENST00000523873 CTDSP2O14595 271 aa10.28□□□□□ -0.76
VEGFA-224ENST00000523873 APOA1P02647 267 aa10.28□□□□□ -0.76
VEGFA-224ENST00000523873 GAPDHP04406 335 aaKnown RBP10.28□□□□□ -0.76
VEGFA-224ENST00000523873 SAA2P0DJI9 122 aaPredicted RBP10.28□□□□□ -0.76
VEGFA-224ENST00000523873 MDKP21741 143 aaPredicted RBP10.28□□□□□ -0.76
VEGFA-224ENST00000523873 BRS3P32247 399 aa10.28□□□□□ -0.76
VEGFA-224ENST00000523873 SOX6P35712 828 aa10.28□□□□□ -0.76
VEGFA-224ENST00000523873 RAB7AP51149 207 aa10.28□□□□□ -0.76
VEGFA-224ENST00000523873 RAG2P55895 527 aa10.28□□□□□ -0.76
VEGFA-224ENST00000523873 PITPNAQ00169 270 aa10.28□□□□□ -0.76
VEGFA-224ENST00000523873 RPL39P5Q59GN2 51 aa10.28□□□□□ -0.76
VEGFA-224ENST00000523873 LY6G6FQ5SQ64 297 aa10.28□□□□□ -0.76
VEGFA-224ENST00000523873 CCDC144NLQ6NUI1 221 aa10.28□□□□□ -0.76
VEGFA-224ENST00000523873 Q6ZSV7 163 aa10.28□□□□□ -0.76
VEGFA-224ENST00000523873 SNX29P2Q8IUI4 249 aa10.28□□□□□ -0.76
VEGFA-224ENST00000523873 RTN4IP1Q8WWV3 396 aaPredicted RBP10.28□□□□□ -0.76
VEGFA-224ENST00000523873 CCDC59Q9P031 241 aaKnown RBP10.28□□□□□ -0.76
VEGFA-224ENST00000523873 ATRQ13535 2644 aa10.27□□□□□ -0.76
VEGFA-224ENST00000523873 TRBV6-7A0A0A0MS04 114 aa10.27□□□□□ -0.77
VEGFA-224ENST00000523873 SH2D7A6NKC9 451 aaPredicted RBP10.27□□□□□ -0.77
VEGFA-224ENST00000523873 ZNF736B4DX44 427 aaPredicted RBP10.27□□□□□ -0.77
VEGFA-224ENST00000523873 J3QRK9 145 aa10.27□□□□□ -0.77
VEGFA-224ENST00000523873 IGKV1D-33P01593 117 aa10.27□□□□□ -0.77
VEGFA-224ENST00000523873 IGKV1-33P01594 117 aa10.27□□□□□ -0.77
VEGFA-224ENST00000523873 HLA-DQB1P01920 261 aa10.27□□□□□ -0.77
VEGFA-224ENST00000523873 ARHGDIBP52566 201 aa10.27□□□□□ -0.77
VEGFA-224ENST00000523873 ZNF137PP52743 207 aa10.27□□□□□ -0.77
VEGFA-224ENST00000523873 HES1Q14469 280 aa10.27□□□□□ -0.77
VEGFA-224ENST00000523873 HNF4GQ14541 408 aa10.27□□□□□ -0.77
VEGFA-224ENST00000523873 SRSF7Q16629 238 aaKnown RBP eCLIP10.27□□□□□ -0.777e-11■□□□□ 9.1
VEGFA-224ENST00000523873 AWAT1Q58HT5 328 aa10.27□□□□□ -0.77
VEGFA-224ENST00000523873 RNASE12Q5GAN4 147 aaKnown RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 144.8 ms