RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 ATXN7O15265 892 aaPredicted RBP22.14■■□□□ 1.13
COL13A1-210ENST00000517713 FGF2P09038 288 aa22.14■■□□□ 1.13
COL13A1-210ENST00000517713 SLC25A6P12236 298 aa22.14■■□□□ 1.13
COL13A1-210ENST00000517713 GZMHP20718 246 aa22.14■■□□□ 1.13
COL13A1-210ENST00000517713 HTD2P86397 168 aa22.14■■□□□ 1.13
COL13A1-210ENST00000517713 ZNF585BQ52M93 769 aa22.14■■□□□ 1.13
COL13A1-210ENST00000517713 EIF4E3Q8N5X7 224 aaKnown RBP22.14■■□□□ 1.13
COL13A1-210ENST00000517713 Q8TCH9 128 aa22.14■■□□□ 1.13
COL13A1-210ENST00000517713 A0A1B0GU03 582 aa22.13■■□□□ 1.13
COL13A1-210ENST00000517713 ADH4P08319 380 aa22.13■■□□□ 1.13
COL13A1-210ENST00000517713 EIF5AL1Q6IS14 154 aaKnown RBP22.13■■□□□ 1.13
COL13A1-210ENST00000517713 RNASE11Q8TAA1 199 aaKnown RBP22.13■■□□□ 1.13
COL13A1-210ENST00000517713 LSM10Q969L4 123 aaKnown RBP22.13■■□□□ 1.13
COL13A1-210ENST00000517713 MAGT1Q9H0U3 335 aa22.13■■□□□ 1.13
COL13A1-210ENST00000517713 NGBQ9NPG2 151 aa22.13■■□□□ 1.13
COL13A1-210ENST00000517713 IGHV3-43A0A0B4J1X8 118 aa22.13■■□□□ 1.13
COL13A1-210ENST00000517713 A8MXK9 166 aa22.13■■□□□ 1.13
COL13A1-210ENST00000517713 SSSCA1O60232 199 aa22.13■■□□□ 1.13
COL13A1-210ENST00000517713 CYB5R3P00387 301 aaPredicted RBP22.13■■□□□ 1.13
COL13A1-210ENST00000517713 IGHV3-43DP0DP04 118 aa22.13■■□□□ 1.13
COL13A1-210ENST00000517713 EPHA1P21709 976 aa22.13■■□□□ 1.13
COL13A1-210ENST00000517713 CR1LQ2VPA4 569 aa22.13■■□□□ 1.13
COL13A1-210ENST00000517713 ADAM5Q6NVV9 412 aa22.13■■□□□ 1.13
COL13A1-210ENST00000517713 OR2C3Q8N628 320 aa22.13■■□□□ 1.13
COL13A1-210ENST00000517713 DIRC2Q96SL1 478 aa22.13■■□□□ 1.13
COL13A1-210ENST00000517713 ESRP2Q9H6T0 727 aaKnown RBP22.13■■□□□ 1.13
COL13A1-210ENST00000517713 FAM157CP0CG43 387 aa22.12■■□□□ 1.13
COL13A1-210ENST00000517713 CA7P43166 264 aa22.12■■□□□ 1.13
COL13A1-210ENST00000517713 ZNF561Q8N587 486 aa22.12■■□□□ 1.13
COL13A1-210ENST00000517713 MAP1BP46821 2468 aaKnown RBP22.11■■□□□ 1.13
COL13A1-210ENST00000517713 PITX3O75364 302 aa22.11■■□□□ 1.13
COL13A1-210ENST00000517713 VAMP2P63027 116 aa22.11■■□□□ 1.13
COL13A1-210ENST00000517713 NHLH2Q02577 135 aa22.11■■□□□ 1.13
COL13A1-210ENST00000517713 MSMO1Q15800 293 aa22.11■■□□□ 1.13
COL13A1-210ENST00000517713 CCDC28AQ8IWP9 274 aa22.11■■□□□ 1.13
COL13A1-210ENST00000517713 ZNF808Q8N4W9 903 aaPredicted RBP22.11■■□□□ 1.13
COL13A1-210ENST00000517713 UBAC2Q8NBM4 344 aa22.11■■□□□ 1.13
COL13A1-210ENST00000517713 C5orf30Q96GV9 206 aa22.11■■□□□ 1.13
COL13A1-210ENST00000517713 C17orf100A8MU93 164 aa22.11■■□□□ 1.13
COL13A1-210ENST00000517713 EDDM3BP56851 147 aa22.11■■□□□ 1.13
COL13A1-210ENST00000517713 FAM24AA6NFZ4 105 aa22.1■■□□□ 1.13
COL13A1-210ENST00000517713 NXPH3O95157 252 aa22.1■■□□□ 1.13
COL13A1-210ENST00000517713 IRF2P14316 349 aa22.1■■□□□ 1.13
COL13A1-210ENST00000517713 MMP9P14780 707 aa22.1■■□□□ 1.13
COL13A1-210ENST00000517713 ASCL1P50553 236 aa22.1■■□□□ 1.13
COL13A1-210ENST00000517713 CCL8P80075 99 aa22.1■■□□□ 1.13
COL13A1-210ENST00000517713 EWSR1Q01844 656 aaKnown RBP eCLIP22.1■■□□□ 1.13
COL13A1-210ENST00000517713 EIF4EBP1Q13541 118 aaPredicted RBP22.1■■□□□ 1.13
COL13A1-210ENST00000517713 STUMQ69YW2 141 aa22.1■■□□□ 1.13
COL13A1-210ENST00000517713 ST6GALNAC3Q8NDV1 305 aa22.1■■□□□ 1.13
COL13A1-210ENST00000517713 SDSLQ96GA7 329 aa22.1■■□□□ 1.13
COL13A1-210ENST00000517713 WFDC1Q9HC57 220 aa22.1■■□□□ 1.13
COL13A1-210ENST00000517713 TAS2R3Q9NYW6 316 aa22.1■■□□□ 1.13
COL13A1-210ENST00000517713 VSTM5A8MXK1 200 aa22.09■■□□□ 1.13
COL13A1-210ENST00000517713 DEFB108AA8MXU0 73 aa22.09■■□□□ 1.13
COL13A1-210ENST00000517713 SHOXO15266 292 aa22.09■■□□□ 1.13
COL13A1-210ENST00000517713 IGKV1-5P01602 117 aa22.09■■□□□ 1.13
COL13A1-210ENST00000517713 CD55P08174 381 aa22.09■■□□□ 1.13
COL13A1-210ENST00000517713 TNFRSF1AP19438 455 aa22.09■■□□□ 1.13
COL13A1-210ENST00000517713 CAV2P51636 162 aa22.09■■□□□ 1.13
COL13A1-210ENST00000517713 AKR1C2P52895 323 aa22.09■■□□□ 1.13
COL13A1-210ENST00000517713 OR1S2Q8NGQ3 325 aa22.09■■□□□ 1.13
COL13A1-210ENST00000517713 BORCS7-ASMTA0A0B4J1R7 106 aa22.09■■□□□ 1.13
COL13A1-210ENST00000517713 WRBO00258 174 aa22.09■■□□□ 1.13
COL13A1-210ENST00000517713 LTC4SQ16873 150 aa22.09■■□□□ 1.13
COL13A1-210ENST00000517713 Q6ZRM9 215 aa22.09■■□□□ 1.13
COL13A1-210ENST00000517713 LYRM2Q9NU23 88 aaPredicted RBP22.09■■□□□ 1.13
COL13A1-210ENST00000517713 LGALS8O00214 317 aa22.08■■□□□ 1.13
COL13A1-210ENST00000517713 CHST1O43916 411 aa22.08■■□□□ 1.13
COL13A1-210ENST00000517713 ZP3P21754 424 aa22.08■■□□□ 1.13
COL13A1-210ENST00000517713 IZUMO4Q1ZYL8 232 aa22.08■■□□□ 1.13
COL13A1-210ENST00000517713 DEFB108BQ8NET1 73 aa22.08■■□□□ 1.13
COL13A1-210ENST00000517713 C14orf79Q96F83 325 aa22.08■■□□□ 1.13
COL13A1-210ENST00000517713 SLC25A31Q9H0C2 315 aa22.08■■□□□ 1.13
COL13A1-210ENST00000517713 NCOR1P1Q9H4R4 102 aa22.08■■□□□ 1.13
COL13A1-210ENST00000517713 OR6C3Q9NZP0 311 aa22.08■■□□□ 1.13
COL13A1-210ENST00000517713 PSG11Q9UQ72 335 aa22.08■■□□□ 1.13
COL13A1-210ENST00000517713 SELLP14151 372 aa22.07■■□□□ 1.12
COL13A1-210ENST00000517713 LPAR6P43657 344 aa22.07■■□□□ 1.12
COL13A1-210ENST00000517713 RPL30P62888 115 aaKnown RBP22.07■■□□□ 1.12
COL13A1-210ENST00000517713 CATR1Q13166 79 aa22.07■■□□□ 1.12
COL13A1-210ENST00000517713 NCMAPQ5T1S8 102 aa22.07■■□□□ 1.12
COL13A1-210ENST00000517713 TGIF2LYQ8IUE0 185 aa22.07■■□□□ 1.12
COL13A1-210ENST00000517713 LINC00052Q96N35 136 aa22.07■■□□□ 1.12
COL13A1-210ENST00000517713 ARV1Q9H2C2 271 aa22.07■■□□□ 1.12
COL13A1-210ENST00000517713 LPAR3Q9UBY5 353 aa22.07■■□□□ 1.12
COL13A1-210ENST00000517713 CACNG5Q9UF02 275 aa22.07■■□□□ 1.12
COL13A1-210ENST00000517713 JPT1Q9UK76 154 aa22.07■■□□□ 1.12
COL13A1-210ENST00000517713 RNF115Q9Y4L5 304 aa22.07■■□□□ 1.12
COL13A1-210ENST00000517713 IGSF23A1L1A6 192 aa22.07■■□□□ 1.12
COL13A1-210ENST00000517713 ZNF705EA8MWA4 302 aaPredicted RBP22.07■■□□□ 1.12
COL13A1-210ENST00000517713 FBXO24O75426 580 aa22.07■■□□□ 1.12
COL13A1-210ENST00000517713 EDARADDQ8WWZ3 215 aa22.07■■□□□ 1.12
COL13A1-210ENST00000517713 ST8SIA5O15466 376 aa22.06■■□□□ 1.12
COL13A1-210ENST00000517713 MUC1P15941 1255 aaPredicted RBP22.06■■□□□ 1.12
COL13A1-210ENST00000517713 ZCCHC24Q8N2G6 241 aaKnown RBP22.06■■□□□ 1.12
COL13A1-210ENST00000517713 TMEM252Q8N6L7 170 aa22.06■■□□□ 1.12
COL13A1-210ENST00000517713 GAFA1Q96PS6 74 aa22.06■■□□□ 1.12
COL13A1-210ENST00000517713 AGMATQ9BSE5 352 aa22.06■■□□□ 1.12
COL13A1-210ENST00000517713 ZNF665Q9H7R5 613 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms