RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 ST6GALNAC5Q9BVH7 336 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 PLA2G12AQ9BZM1 189 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 PLEKHF2Q9H8W4 249 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 NRN1Q9NPD7 142 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 C5AR2Q9P296 337 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 KLHL13Q9P2N7 655 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 SS18L2Q9UHA2 77 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 VDAC3Q9Y277 283 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 ZNF257Q9Y2Q1 563 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 POLR1DQ9Y2S0 133 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 RLFQ13129 1914 aa4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.12□□□□□ -1.75
HMGB1P19-201ENST00000517578 ZNF236Q9UL36 1845 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 CCDC88CQ9P219 2028 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 A0A1W2PPK0 400 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 TMEM8BA6NDV4 472 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 OR2T8A6NH00 312 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 CDC42EP2O14613 210 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 PIN1P1O15428 100 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 ADAM20O43506 726 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 ANGPTL7O43827 346 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 ZNF217O75362 1048 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 CGAP01215 116 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 ISG15P05161 165 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 HPNP05981 417 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 OR9G9P0C7N8 305 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 CT45A10P0DMU9 189 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 KLK2P20151 261 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 HIST1H1TP22492 207 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 EVI2AP22794 236 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 PTGER1P34995 402 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 OR3A4PP47883 348 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 DNASE1L1P49184 302 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 ASCL1P50553 236 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 FABP6P51161 128 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 MFAP4P55083 255 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 LGALS4P56470 323 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 FXYD6P3P58550 94 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 EWSR1Q01844 656 aaKnown RBP eCLIP4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 MGAT2Q10469 447 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 FUT5Q11128 374 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 MFAP5Q13361 173 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 IHHQ14623 411 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 EXOSC7Q15024 291 aaKnown RBP4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 CD226Q15762 336 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 SRSF7Q16629 238 aaKnown RBP eCLIP4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 ZNF260Q3ZCT1 412 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 MPV17L2Q567V2 206 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 MS4A13Q5J8X5 152 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 TIMM23BQ5SRD1 257 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 ZFAND6Q6FIF0 208 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 WBP2NLQ6ICG8 309 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 LCN15Q6UWW0 184 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 PLXDC2Q6UX71 529 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 TRAPPC6BQ86SZ2 158 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 PRR22Q8IZ63 422 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 FBXL14Q8N1E6 418 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 TMEM256Q8N2U0 113 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 SMIM20Q8N5G0 67 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 ZNF676Q8N7Q3 588 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 OR5AR1Q8NGP9 310 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 OR10AG1Q8NH19 301 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 OR13C6PQ8NH95 151 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 SGMS2Q8NHU3 365 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 OR51E1Q8TCB6 317 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 C18orf32Q8TCD1 76 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 SCGB1C1Q8TD33 95 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 BLNKQ8WV28 456 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 NEU4Q8WWR8 484 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 FAM131CQ96AQ9 280 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 SARAFQ96BY9 339 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 TSSK2Q96PF2 358 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 PIMREGQ9BSJ6 248 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 EFCAB11Q9BUY7 163 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 PHF7Q9BWX1 381 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 GGTLC1Q9BX51 225 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 C1QTNF4Q9BXJ3 329 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 GNB1LQ9BYB4 327 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 COMMD5Q9GZQ3 224 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 TMEM191AQ9H0A3 160 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 SLC25A18Q9H1K4 315 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 MAGEH1Q9H213 219 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 NPVFQ9HCQ7 196 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 GNG13Q9P2W3 67 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 KCNS2Q9ULS6 477 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 PLAGL1Q9UM63 463 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 TMED7Q9Y3B3 224 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 WDR90Q96KV7 1748 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 PLXNA3P51805 1871 aa4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 GREB1LQ9C091 1923 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P19-201ENST00000517578 GLI3P10071 1580 aa4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 LOC102725191A0A1B0GVB3 256 aa4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 ODAMA1E959 279 aa4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 HHLA1C9JL84 531 aa4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 FAM72CH0Y354 149 aa4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 H0YJW9 148 aa4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 DHHO43323 396 aa4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 SNAI2O43623 268 aa4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 SYNGR1O43759 233 aa4.1□□□□□ -1.75
HMGB1P19-201ENST00000517578 DUX1O43812 170 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms