RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 CDX2Q99626 313 aaPredicted RBP4.3□□□□□ -1.72
PTPN13-209ENST00000511467 ZMIZ1Q9ULJ6 1067 aa4.3□□□□□ -1.72
PTPN13-209ENST00000511467 TRBV6-6A0A0A6YYG2 114 aa4.3□□□□□ -1.72
PTPN13-209ENST00000511467 HCRTO43612 131 aa4.3□□□□□ -1.72
PTPN13-209ENST00000511467 IGKV3-11P04433 115 aa4.3□□□□□ -1.72
PTPN13-209ENST00000511467 FHITP49789 147 aa4.3□□□□□ -1.72
PTPN13-209ENST00000511467 RPS4XP62701 263 aaKnown RBP4.3□□□□□ -1.72
PTPN13-209ENST00000511467 LCN2P80188 198 aa4.3□□□□□ -1.72
PTPN13-209ENST00000511467 SLC38A11Q08AI6 406 aa4.3□□□□□ -1.72
PTPN13-209ENST00000511467 ZNF793Q6ZN11 406 aa4.3□□□□□ -1.72
PTPN13-209ENST00000511467 SPATC1Q76KD6 591 aa4.3□□□□□ -1.72
PTPN13-209ENST00000511467 TCF23Q7RTU1 214 aa4.3□□□□□ -1.72
PTPN13-209ENST00000511467 LINC01555Q8NAE3 123 aa4.3□□□□□ -1.72
PTPN13-209ENST00000511467 AQP10Q96PS8 301 aa4.3□□□□□ -1.72
PTPN13-209ENST00000511467 ABHD14AQ9BUJ0 271 aa4.3□□□□□ -1.72
PTPN13-209ENST00000511467 SLC7A10Q9NS82 523 aa4.3□□□□□ -1.72
PTPN13-209ENST00000511467 TMEFF2Q9UIK5 374 aaPredicted RBP4.3□□□□□ -1.72
PTPN13-209ENST00000511467 K7EMI3 77 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 CIDEAO60543 219 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 ZNF205O95201 554 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 OPN1LWP04000 364 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 SMIM18P0DKX4 95 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 ZNF32P17041 273 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 CTRB1P17538 263 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 CDC34P49427 236 aaPredicted RBP4.29□□□□□ -1.72
PTPN13-209ENST00000511467 PSG6Q00889 435 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 AMMECR1LQ6DCA0 310 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 CTRB2Q6GPI1 263 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 SLC25A47Q6Q0C1 308 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 ARL6IP6Q8N6S5 226 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 WFDC5Q8TCV5 224 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 TMEM54Q969K7 222 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 MOB3AQ96BX8 217 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 SLC25A38Q96DW6 304 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 TMEM30AQ9NV96 361 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 ZNF230Q9UIE0 474 aaPredicted RBP4.29□□□□□ -1.72
PTPN13-209ENST00000511467 A0A0G2JK05 382 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 LNP1A1A4G5 178 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 H0Y8X5 98 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 H7C1C5 153 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 SYNGR2O43760 224 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 MPC2O95563 127 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 BGLAPP02818 100 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 GRPP07492 148 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 HTR1DP28221 377 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 RNASE12Q5GAN4 147 aaKnown RBP4.29□□□□□ -1.72
PTPN13-209ENST00000511467 LY6G6FQ5SQ64 297 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 MRPL14Q6P1L8 145 aaKnown RBP4.29□□□□□ -1.72
PTPN13-209ENST00000511467 C12orf54Q6X4T0 127 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 OR9G1Q8NH87 305 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 SLC6A13Q9NSD5 602 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 ZNF257Q9Y2Q1 563 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 TRGV8A0A0C4DH27 118 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 A0A1W2PPV9 198 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 A0A1W2PQF6 199 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 SCO1O75880 301 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 TCL1AP56279 114 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 RPL31P62899 125 aaKnown RBP4.29□□□□□ -1.72
PTPN13-209ENST00000511467 SEC11AP67812 179 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 CT83Q5H943 113 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 SFRP4Q6FHJ7 346 aaPredicted RBP4.29□□□□□ -1.72
PTPN13-209ENST00000511467 NKAIN4Q8IVV8 208 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 TMED6Q8WW62 240 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 PDCD1LG2Q9BQ51 273 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 MAP1LC3CQ9BXW4 147 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 SLC25A18Q9H1K4 315 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 LAMTOR2Q9Y2Q5 125 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 J3QLI3 93 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 PPM1DO15297 605 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 CXCL13O43927 109 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 OR10J4P0C629 311 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 SNRPBP14678 240 aaKnown RBP4.29□□□□□ -1.72
PTPN13-209ENST00000511467 ERVFC1-1P60608 527 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 PCOLCEQ15113 449 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 INPP5JQ15735 1006 aaPredicted RBP4.29□□□□□ -1.72
PTPN13-209ENST00000511467 SPSB3Q6PJ21 355 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 SIRT6Q8N6T7 355 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 PNPLA1Q8N8W4 532 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 A0A1W2PQM1 296 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 M0R1W7 72 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 GNG7O60262 68 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 CCL1P22362 96 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 ACAA2P42765 397 aaKnown RBP4.29□□□□□ -1.72
PTPN13-209ENST00000511467 REC114Q7Z4M0 266 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 LYPD1Q8N2G4 141 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 NUDCD2Q8WVJ2 157 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 NRG4Q8WWG1 115 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 GNG13Q9P2W3 67 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 LINC00312Q9Y6C7 94 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 PPIAL4EA0A075B759 164 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 PPIAL4DF5H284 164 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 PPIAL4FP0DN26 164 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 HNRNPA3P51991 378 aaKnown RBP4.29□□□□□ -1.72
PTPN13-209ENST00000511467 SOX8P57073 446 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 RBPMS2Q6ZRY4 209 aaKnown RBP4.29□□□□□ -1.72
PTPN13-209ENST00000511467 LRP11Q86VZ4 500 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 AQP3Q92482 292 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 SFRP2Q96HF1 295 aa4.29□□□□□ -1.72
PTPN13-209ENST00000511467 PARD6GQ9BYG4 376 aaPredicted RBP4.29□□□□□ -1.72
PTPN13-209ENST00000511467 ZNF355PQ9NSJ1 428 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms