RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 PLA2R1Q13018 1463 aa2.38□□□□□ -2.03
TRAPPC13-208ENST00000505553 OR6C70A6NIJ9 312 aa2.38□□□□□ -2.03
TRAPPC13-208ENST00000505553 D6RAR5 112 aa2.38□□□□□ -2.03
TRAPPC13-208ENST00000505553 TRAPPC3O43617 180 aa2.38□□□□□ -2.03
TRAPPC13-208ENST00000505553 LYPLA2O95372 231 aa2.38□□□□□ -2.03
TRAPPC13-208ENST00000505553 IGLV7-43P04211 117 aa2.38□□□□□ -2.03
TRAPPC13-208ENST00000505553 IFNA16P05015 189 aa2.38□□□□□ -2.03
TRAPPC13-208ENST00000505553 ATP5G1P05496 136 aa2.38□□□□□ -2.03
TRAPPC13-208ENST00000505553 IL3P08700 152 aa2.38□□□□□ -2.03
TRAPPC13-208ENST00000505553 OR4A8P0C604 315 aa2.38□□□□□ -2.03
TRAPPC13-208ENST00000505553 OR12D1P0DN82 309 aa2.38□□□□□ -2.03
TRAPPC13-208ENST00000505553 HIST1H1EP10412 219 aaKnown RBP2.38□□□□□ -2.03
TRAPPC13-208ENST00000505553 GABRA1P14867 456 aa2.38□□□□□ -2.03
TRAPPC13-208ENST00000505553 S100A5P33763 92 aa2.38□□□□□ -2.03
TRAPPC13-208ENST00000505553 PSMB3P49720 205 aa2.38□□□□□ -2.03
TRAPPC13-208ENST00000505553 KRTAP12-2P59991 146 aa2.38□□□□□ -2.03
TRAPPC13-208ENST00000505553 MRPS25P82663 173 aaKnown RBP2.38□□□□□ -2.03
TRAPPC13-208ENST00000505553 TMEM176BQ3YBM2 270 aaPredicted RBP2.38□□□□□ -2.03
TRAPPC13-208ENST00000505553 ZCWPW2Q504Y3 356 aa2.38□□□□□ -2.03
TRAPPC13-208ENST00000505553 SYPL2Q5VXT5 272 aa2.38□□□□□ -2.03
TRAPPC13-208ENST00000505553 LAIR2Q6ISS4 152 aa2.38□□□□□ -2.03
TRAPPC13-208ENST00000505553 SLC25A34Q6PIV7 304 aa2.38□□□□□ -2.03
TRAPPC13-208ENST00000505553 TMEM144Q7Z5S9 345 aa2.38□□□□□ -2.03
TRAPPC13-208ENST00000505553 DAZ4Q86SG3 579 aaKnown RBP2.38□□□□□ -2.03
TRAPPC13-208ENST00000505553 NAA40Q86UY6 237 aa2.38□□□□□ -2.03
TRAPPC13-208ENST00000505553 TRAPPC5Q8IUR0 188 aa2.38□□□□□ -2.03
TRAPPC13-208ENST00000505553 OR8K1Q8NGG5 319 aa2.38□□□□□ -2.03
TRAPPC13-208ENST00000505553 ZNRF2Q8NHG8 242 aa2.38□□□□□ -2.03
TRAPPC13-208ENST00000505553 MFSD8Q8NHS3 518 aa2.38□□□□□ -2.03
TRAPPC13-208ENST00000505553 APOBEC3DQ96AK3 386 aaPredicted RBP2.38□□□□□ -2.03
TRAPPC13-208ENST00000505553 CMBLQ96DG6 245 aa2.38□□□□□ -2.03
TRAPPC13-208ENST00000505553 STARD4Q96DR4 205 aa2.38□□□□□ -2.03
TRAPPC13-208ENST00000505553 EBNA1BP2Q99848 306 aaKnown RBP2.38□□□□□ -2.03
TRAPPC13-208ENST00000505553 GTSF1LQ9H1H1 148 aa2.38□□□□□ -2.03
TRAPPC13-208ENST00000505553 DAZ1Q9NQZ3 744 aaKnown RBP2.38□□□□□ -2.03
TRAPPC13-208ENST00000505553 DKKL1Q9UK85 242 aa2.38□□□□□ -2.03
TRAPPC13-208ENST00000505553 HDGFL3Q9Y3E1 203 aa2.38□□□□□ -2.03
TRAPPC13-208ENST00000505553 LSM5Q9Y4Y9 91 aaKnown RBP2.38□□□□□ -2.03
TRAPPC13-208ENST00000505553 ALG5Q9Y673 324 aa2.38□□□□□ -2.03
TRAPPC13-208ENST00000505553 S4R3C0 116 aa2.38□□□□□ -2.03
TRAPPC13-208ENST00000505553 UGGT2Q9NYU1 1516 aa2.38□□□□□ -2.03
TRAPPC13-208ENST00000505553 CNTLNQ9NXG0 1405 aa2.38□□□□□ -2.03
TRAPPC13-208ENST00000505553 SHANK2Q9UPX8 1470 aa2.37□□□□□ -2.03
TRAPPC13-208ENST00000505553 RICTORQ6R327 1708 aa2.37□□□□□ -2.03
TRAPPC13-208ENST00000505553 HECW1Q76N89 1606 aa2.37□□□□□ -2.03
TRAPPC13-208ENST00000505553 IGLV3-12A0A075B6K2 115 aa2.37□□□□□ -2.03
TRAPPC13-208ENST00000505553 TRAV40A0A0B4J280 105 aa2.37□□□□□ -2.03
TRAPPC13-208ENST00000505553 C5orf49A4QMS7 147 aa2.37□□□□□ -2.03
TRAPPC13-208ENST00000505553 OR5H14A6NHG9 310 aa2.37□□□□□ -2.03
TRAPPC13-208ENST00000505553 ZNF324O75467 553 aaPredicted RBP2.37□□□□□ -2.03
TRAPPC13-208ENST00000505553 GPR75O95800 540 aa2.37□□□□□ -2.03
TRAPPC13-208ENST00000505553 LTAP01374 205 aa2.37□□□□□ -2.03
TRAPPC13-208ENST00000505553 CTXN2P0C2S0 81 aa2.37□□□□□ -2.03
TRAPPC13-208ENST00000505553 CXCL3P19876 107 aa2.37□□□□□ -2.03
TRAPPC13-208ENST00000505553 TGFBR1P36897 503 aa2.37□□□□□ -2.03
TRAPPC13-208ENST00000505553 HPCAP84074 193 aa2.37□□□□□ -2.03
TRAPPC13-208ENST00000505553 IHHQ14623 411 aa2.37□□□□□ -2.03
TRAPPC13-208ENST00000505553 BATFQ16520 125 aa2.37□□□□□ -2.03
TRAPPC13-208ENST00000505553 MAPK14Q16539 360 aa2.37□□□□□ -2.03
TRAPPC13-208ENST00000505553 HIST3H3Q16695 136 aa2.37□□□□□ -2.03
TRAPPC13-208ENST00000505553 C1orf195Q5TG92 126 aa2.37□□□□□ -2.03
TRAPPC13-208ENST00000505553 LCN8Q6JVE9 175 aa2.37□□□□□ -2.03
TRAPPC13-208ENST00000505553 Q6ZRU5 148 aa2.37□□□□□ -2.03
TRAPPC13-208ENST00000505553 DOLPP1Q86YN1 238 aa2.37□□□□□ -2.03
TRAPPC13-208ENST00000505553 ZFP62Q8NB50 900 aaPredicted RBP2.37□□□□□ -2.03
TRAPPC13-208ENST00000505553 TMEM161BQ8NDZ6 487 aa2.37□□□□□ -2.03
TRAPPC13-208ENST00000505553 OR1M1Q8NGA1 313 aa2.37□□□□□ -2.03
TRAPPC13-208ENST00000505553 GPR32P1Q8NGA4 272 aa2.37□□□□□ -2.03
TRAPPC13-208ENST00000505553 JOSD2Q8TAC2 188 aa2.37□□□□□ -2.03
TRAPPC13-208ENST00000505553 KCTD4Q8WVF5 259 aa2.37□□□□□ -2.03
TRAPPC13-208ENST00000505553 ANKRD7Q92527 254 aa2.37□□□□□ -2.03
TRAPPC13-208ENST00000505553 ACY3Q96HD9 319 aa2.37□□□□□ -2.03
TRAPPC13-208ENST00000505553 LINC00477Q96M19 166 aa2.37□□□□□ -2.03
TRAPPC13-208ENST00000505553 RTBDNQ9BSG5 229 aaPredicted RBP2.37□□□□□ -2.03
TRAPPC13-208ENST00000505553 TXNIPQ9H3M7 391 aa2.37□□□□□ -2.03
TRAPPC13-208ENST00000505553 HES4Q9HCC6 221 aa2.37□□□□□ -2.03
TRAPPC13-208ENST00000505553 SLC2A9Q9NRM0 540 aa2.37□□□□□ -2.03
TRAPPC13-208ENST00000505553 TRAPPC1Q9Y5R8 145 aa2.37□□□□□ -2.03
TRAPPC13-208ENST00000505553 NPATQ14207 1427 aa2.37□□□□□ -2.03
TRAPPC13-208ENST00000505553 SCAPERQ9BY12 1400 aa2.37□□□□□ -2.03
TRAPPC13-208ENST00000505553 ABCA8O94911 1581 aa2.37□□□□□ -2.03
TRAPPC13-208ENST00000505553 TCOF1Q13428 1488 aaKnown RBP2.37□□□□□ -2.03
TRAPPC13-208ENST00000505553 RAPGEF2Q9Y4G8 1499 aa2.37□□□□□ -2.03
TRAPPC13-208ENST00000505553 RNF17Q9BXT8 1623 aaKnown RBP2.37□□□□□ -2.03
TRAPPC13-208ENST00000505553 LRRC7Q96NW7 1537 aa2.36□□□□□ -2.03
TRAPPC13-208ENST00000505553 C3P01024 1663 aa2.36□□□□□ -2.03
TRAPPC13-208ENST00000505553 TRAV8-1A0A0A6YYK1 113 aa2.36□□□□□ -2.03
TRAPPC13-208ENST00000505553 A0A1W2PQL4 384 aaPredicted RBP2.36□□□□□ -2.03
TRAPPC13-208ENST00000505553 RBBP9O75884 186 aa2.36□□□□□ -2.03
TRAPPC13-208ENST00000505553 PDYNP01213 254 aa2.36□□□□□ -2.03
TRAPPC13-208ENST00000505553 GYPCP04921 128 aa2.36□□□□□ -2.03
TRAPPC13-208ENST00000505553 IFNA6P05013 189 aa2.36□□□□□ -2.03
TRAPPC13-208ENST00000505553 UCHL3P15374 230 aa2.36□□□□□ -2.03
TRAPPC13-208ENST00000505553 CXCL2P19875 107 aa2.36□□□□□ -2.03
TRAPPC13-208ENST00000505553 CCR7P32248 378 aa2.36□□□□□ -2.03
TRAPPC13-208ENST00000505553 IDH3GP51553 393 aaPredicted RBP2.36□□□□□ -2.03
TRAPPC13-208ENST00000505553 TCL1AP56279 114 aa2.36□□□□□ -2.03
TRAPPC13-208ENST00000505553 CCL7P80098 99 aa2.36□□□□□ -2.03
TRAPPC13-208ENST00000505553 CASP8Q14790 479 aa2.36□□□□□ -2.03
TRAPPC13-208ENST00000505553 EBLN2Q6P2I7 272 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms