RNA–Protein interactions for RNA: ENST00000492954.1

PTPRU-207, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 625 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-207ENST00000492954 C18orf65Q6ZTR6 163 aa14.21□□□□□ -0.13
PTPRU-207ENST00000492954 ODF3L1Q8IXM7 274 aa14.21□□□□□ -0.13
PTPRU-207ENST00000492954 SVOPQ8N4V2 548 aa14.21□□□□□ -0.13
PTPRU-207ENST00000492954 GALMQ96C23 342 aa14.21□□□□□ -0.13
PTPRU-207ENST00000492954 CHMP1AQ9HD42 196 aaPredicted RBP14.21□□□□□ -0.13
PTPRU-207ENST00000492954 PLEKHJ1Q9NW61 149 aa14.21□□□□□ -0.13
PTPRU-207ENST00000492954 YPEL1O60688 119 aa14.2□□□□□ -0.14
PTPRU-207ENST00000492954 NAPSAO96009 420 aa14.2□□□□□ -0.14
PTPRU-207ENST00000492954 ARSBP15848 533 aa14.2□□□□□ -0.14
PTPRU-207ENST00000492954 TBCEQ15813 527 aaPredicted RBP14.2□□□□□ -0.14
PTPRU-207ENST00000492954 RAB11BQ15907 218 aa14.2□□□□□ -0.14
PTPRU-207ENST00000492954 ZNF880Q6PDB4 577 aa14.2□□□□□ -0.14
PTPRU-207ENST00000492954 OR2W3Q7Z3T1 314 aa14.2□□□□□ -0.14
PTPRU-207ENST00000492954 SETD6Q8TBK2 473 aa14.2□□□□□ -0.14
PTPRU-207ENST00000492954 IL1F10Q8WWZ1 152 aa14.2□□□□□ -0.14
PTPRU-207ENST00000492954 YPEL2Q96QA6 119 aa14.2□□□□□ -0.14
PTPRU-207ENST00000492954 HDHD3Q9BSH5 251 aaPredicted RBP14.2□□□□□ -0.14
PTPRU-207ENST00000492954 URM1Q9BTM9 101 aaKnown RBP14.2□□□□□ -0.14
PTPRU-207ENST00000492954 MRPL20Q9BYC9 149 aaKnown RBP14.2□□□□□ -0.14
PTPRU-207ENST00000492954 NECAP2Q9NVZ3 263 aa14.2□□□□□ -0.14
PTPRU-207ENST00000492954 ABRACLQ9P1F3 81 aa14.2□□□□□ -0.14
PTPRU-207ENST00000492954 LRRC42Q9Y546 428 aa14.2□□□□□ -0.14
PTPRU-207ENST00000492954 AP4M1O00189 453 aa14.19□□□□□ -0.14
PTPRU-207ENST00000492954 RGS11O94810 467 aa14.19□□□□□ -0.14
PTPRU-207ENST00000492954 OR3A3P47888 321 aa14.19□□□□□ -0.14
PTPRU-207ENST00000492954 CLDN12P56749 244 aa14.19□□□□□ -0.14
PTPRU-207ENST00000492954 SLC35B1P78383 322 aa14.19□□□□□ -0.14
PTPRU-207ENST00000492954 LY6G6FQ5SQ64 297 aa14.19□□□□□ -0.14
PTPRU-207ENST00000492954 FOXB2Q5VYV0 432 aa14.19□□□□□ -0.14
PTPRU-207ENST00000492954 ETV3LQ6ZN32 361 aa14.19□□□□□ -0.14
PTPRU-207ENST00000492954 REC114Q7Z4M0 266 aa14.19□□□□□ -0.14
PTPRU-207ENST00000492954 FAM89BQ8N5H3 189 aa14.19□□□□□ -0.14
PTPRU-207ENST00000492954 FAM71E2Q8N5Q1 922 aa14.19□□□□□ -0.14
PTPRU-207ENST00000492954 COMMD1Q8N668 190 aa14.19□□□□□ -0.14
PTPRU-207ENST00000492954 OR51D1Q8NGF3 324 aa14.19□□□□□ -0.14
PTPRU-207ENST00000492954 OR8H1Q8NGG4 311 aa14.19□□□□□ -0.14
PTPRU-207ENST00000492954 RASL11BQ9BPW5 248 aa14.19□□□□□ -0.14
PTPRU-207ENST00000492954 NABP2Q9BQ15 211 aa14.19□□□□□ -0.14
PTPRU-207ENST00000492954 HSPB9Q9BQS6 159 aa14.19□□□□□ -0.14
PTPRU-207ENST00000492954 AK3Q9UIJ7 227 aa14.19□□□□□ -0.14
PTPRU-207ENST00000492954 SAA2-SAA4A0A096LPE2 208 aa14.18□□□□□ -0.14
PTPRU-207ENST00000492954 SAA2P0DJI9 122 aaPredicted RBP14.18□□□□□ -0.14
PTPRU-207ENST00000492954 SSX1Q16384 188 aa14.18□□□□□ -0.14
PTPRU-207ENST00000492954 ZNF833PQ6ZTB9 187 aa14.18□□□□□ -0.14
PTPRU-207ENST00000492954 MOB1BQ7L9L4 216 aa14.18□□□□□ -0.14
PTPRU-207ENST00000492954 ZNF367Q7RTV3 350 aa14.18□□□□□ -0.14
PTPRU-207ENST00000492954 LINC00482Q8N8I6 264 aa14.18□□□□□ -0.14
PTPRU-207ENST00000492954 OR2AK2Q8NG84 335 aa14.18□□□□□ -0.14
PTPRU-207ENST00000492954 IFI27L2Q9H2X8 130 aa14.18□□□□□ -0.14
PTPRU-207ENST00000492954 ACOT13Q9NPJ3 140 aa14.18□□□□□ -0.14
PTPRU-207ENST00000492954 AURKAIP1Q9NWT8 199 aaPredicted RBP14.18□□□□□ -0.14
PTPRU-207ENST00000492954 STEAP1Q9UHE8 339 aa14.18□□□□□ -0.14
PTPRU-207ENST00000492954 BLOC1S6Q9UL45 172 aa14.18□□□□□ -0.14
PTPRU-207ENST00000492954 TRBV6-6A0A0A6YYG2 114 aa14.17□□□□□ -0.14
PTPRU-207ENST00000492954 FOXI3A8MTJ6 420 aaPredicted RBP14.17□□□□□ -0.14
PTPRU-207ENST00000492954 NUDT19A8MXV4 375 aa14.17□□□□□ -0.14
PTPRU-207ENST00000492954 ST8SIA5O15466 376 aa14.17□□□□□ -0.14
PTPRU-207ENST00000492954 SLC2A2P11168 524 aaPredicted RBP14.17□□□□□ -0.14
PTPRU-207ENST00000492954 TMEM50BP56557 158 aa14.17□□□□□ -0.14
PTPRU-207ENST00000492954 MMDQ15546 238 aa14.17□□□□□ -0.14
PTPRU-207ENST00000492954 C8orf86Q6ZUL3 223 aa14.17□□□□□ -0.14
PTPRU-207ENST00000492954 FAM3DQ96BQ1 224 aa14.17□□□□□ -0.14
PTPRU-207ENST00000492954 RITA1Q96K30 269 aa14.17□□□□□ -0.14
PTPRU-207ENST00000492954 PARP12Q9H0J9 701 aaKnown RBP14.17□□□□□ -0.14
PTPRU-207ENST00000492954 ZFP57Q9NU63 452 aa14.17□□□□□ -0.14
PTPRU-207ENST00000492954 RAB26Q9ULW5 256 aa14.17□□□□□ -0.14
PTPRU-207ENST00000492954 V9GY05 133 aa14.17□□□□□ -0.14
PTPRU-207ENST00000492954 DNAH3Q8TD57 4116 aa14.17□□□□□ -0.14
PTPRU-207ENST00000492954 CNTFRP26992 372 aa14.16□□□□□ -0.14
PTPRU-207ENST00000492954 SOX6P35712 828 aa14.16□□□□□ -0.14
PTPRU-207ENST00000492954 THBS3P49746 956 aa14.16□□□□□ -0.14
PTPRU-207ENST00000492954 VEGFCP49767 419 aa14.16□□□□□ -0.14
PTPRU-207ENST00000492954 PLA2G7Q13093 441 aa14.16□□□□□ -0.14
PTPRU-207ENST00000492954 PNLIPRP3Q17RR3 467 aa14.16□□□□□ -0.14
PTPRU-207ENST00000492954 C2orf76Q3KRA6 126 aa14.16□□□□□ -0.14
PTPRU-207ENST00000492954 HES5Q5TA89 166 aa14.16□□□□□ -0.14
PTPRU-207ENST00000492954 TEX38Q6PEX7 206 aa14.16□□□□□ -0.14
PTPRU-207ENST00000492954 LCNL1Q6ZST4 164 aa14.16□□□□□ -0.14
PTPRU-207ENST00000492954 MRPL41Q8IXM3 137 aaKnown RBP14.16□□□□□ -0.14
PTPRU-207ENST00000492954 KLHL30-AS1Q8NEE0 82 aa14.16□□□□□ -0.14
PTPRU-207ENST00000492954 MRAPQ8TCY5 172 aa14.16□□□□□ -0.14
PTPRU-207ENST00000492954 RCC1LQ96I51 464 aaKnown RBP14.16□□□□□ -0.14
PTPRU-207ENST00000492954 ARHGAP5-AS1Q96IT6 56 aa14.16□□□□□ -0.14
PTPRU-207ENST00000492954 RIMS4Q9H426 269 aaPredicted RBP14.16□□□□□ -0.14
PTPRU-207ENST00000492954 TMEM272A0A1B0GTI8 110 aa14.15□□□□□ -0.14
PTPRU-207ENST00000492954 LDLRAD4O15165 306 aa14.15□□□□□ -0.14
PTPRU-207ENST00000492954 RRP9O43818 475 aaKnown RBP14.15□□□□□ -0.14
PTPRU-207ENST00000492954 ATP6V1G2O95670 118 aa14.15□□□□□ -0.14
PTPRU-207ENST00000492954 RPLP1P05386 114 aaKnown RBP14.15□□□□□ -0.14
PTPRU-207ENST00000492954 ACTBP60709 375 aa14.15□□□□□ -0.14
PTPRU-207ENST00000492954 HLA-DRB3P79483 266 aa14.15□□□□□ -0.14
PTPRU-207ENST00000492954 GON7Q9BXV9 100 aa14.15□□□□□ -0.14
PTPRU-207ENST00000492954 PECRQ9BY49 303 aa14.15□□□□□ -0.14
PTPRU-207ENST00000492954 OR1A1Q9P1Q5 309 aa14.15□□□□□ -0.14
PTPRU-207ENST00000492954 SLC23A1Q9UHI7 598 aa14.15□□□□□ -0.14
PTPRU-207ENST00000492954 ZNF107Q9UII5 783 aaPredicted RBP14.15□□□□□ -0.14
PTPRU-207ENST00000492954 HSF4Q9ULV5 492 aa14.15□□□□□ -0.14
PTPRU-207ENST00000492954 SHISA3A0PJX4 238 aa14.14□□□□□ -0.15
PTPRU-207ENST00000492954 OR10A3P58181 314 aa14.14□□□□□ -0.15
PTPRU-207ENST00000492954 CFHR3Q02985 330 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms