RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 SIRT7Q9NRC8 400 aa13.62□□□□□ -0.23
SEMA4D-220ENST00000492386 CD200P41217 278 aa13.61□□□□□ -0.23
SEMA4D-220ENST00000492386 KIAA0141Q14154 515 aaPredicted RBP13.61□□□□□ -0.23
SEMA4D-220ENST00000492386 TBC1D28Q2M2D7 210 aa13.61□□□□□ -0.23
SEMA4D-220ENST00000492386 LRRC75BQ2VPJ9 315 aa13.61□□□□□ -0.23
SEMA4D-220ENST00000492386 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.61□□□□□ -0.23
SEMA4D-220ENST00000492386 DRAM1Q8N682 238 aa13.61□□□□□ -0.23
SEMA4D-220ENST00000492386 ZNF665Q9H7R5 613 aa13.61□□□□□ -0.23
SEMA4D-220ENST00000492386 TMEM9BQ9NQ34 198 aa13.61□□□□□ -0.23
SEMA4D-220ENST00000492386 CISD1Q9NZ45 108 aaKnown RBP13.61□□□□□ -0.23
SEMA4D-220ENST00000492386 WIPI2Q9Y4P8 454 aa13.61□□□□□ -0.23
SEMA4D-220ENST00000492386 RBM7Q9Y580 266 aaKnown RBP13.61□□□□□ -0.23
SEMA4D-220ENST00000492386 LNP1A1A4G5 178 aa13.61□□□□□ -0.23
SEMA4D-220ENST00000492386 LINC00587B1AMM8 73 aa13.61□□□□□ -0.23
SEMA4D-220ENST00000492386 SMPD2O60906 423 aa13.61□□□□□ -0.23
SEMA4D-220ENST00000492386 WDR1O75083 606 aa13.61□□□□□ -0.23
SEMA4D-220ENST00000492386 PGA5P0DJD9 388 aa13.61□□□□□ -0.23
SEMA4D-220ENST00000492386 BCL2P10415 239 aa13.61□□□□□ -0.23
SEMA4D-220ENST00000492386 CEACAM6P40199 344 aa13.61□□□□□ -0.23
SEMA4D-220ENST00000492386 ERVS71-1P61550 626 aa13.61□□□□□ -0.23
SEMA4D-220ENST00000492386 ZNF146Q15072 292 aa13.61□□□□□ -0.23
SEMA4D-220ENST00000492386 ZNF787Q6DD87 383 aa13.61□□□□□ -0.23
SEMA4D-220ENST00000492386 OR2J1Q9GZK6 312 aa13.61□□□□□ -0.23
SEMA4D-220ENST00000492386 SPRR3Q9UBC9 169 aa13.61□□□□□ -0.23
SEMA4D-220ENST00000492386 COLQQ9Y215 455 aaPredicted RBP13.61□□□□□ -0.23
SEMA4D-220ENST00000492386 POLDIP2Q9Y2S7 368 aa13.61□□□□□ -0.23
SEMA4D-220ENST00000492386 URGCP-MRPS24S4R325 110 aa13.61□□□□□ -0.23
SEMA4D-220ENST00000492386 KIAA2026Q5HYC2 2103 aa13.61□□□□□ -0.23
SEMA4D-220ENST00000492386 CHD3Q12873 2000 aaKnown RBP13.61□□□□□ -0.23
SEMA4D-220ENST00000492386 CDIPTO14735 213 aa13.6□□□□□ -0.23
SEMA4D-220ENST00000492386 PPP1CBP62140 327 aa13.6□□□□□ -0.23
SEMA4D-220ENST00000492386 ALKBH6Q3KRA9 238 aa13.6□□□□□ -0.23
SEMA4D-220ENST00000492386 RNFT1Q5M7Z0 435 aa13.6□□□□□ -0.23
SEMA4D-220ENST00000492386 LCN15Q6UWW0 184 aa13.6□□□□□ -0.23
SEMA4D-220ENST00000492386 RCC1LQ96I51 464 aaKnown RBP13.6□□□□□ -0.23
SEMA4D-220ENST00000492386 BCL2L14Q9BZR8 327 aa13.6□□□□□ -0.23
SEMA4D-220ENST00000492386 OR14J1Q9UGF5 321 aa13.6□□□□□ -0.23
SEMA4D-220ENST00000492386 TGIF2-C20orf24A0A0A6YYL0 155 aa13.6□□□□□ -0.23
SEMA4D-220ENST00000492386 ZFP92A6NM28 416 aa13.6□□□□□ -0.23
SEMA4D-220ENST00000492386 J3QW42 95 aa13.6□□□□□ -0.23
SEMA4D-220ENST00000492386 HOXA5P20719 270 aa13.6□□□□□ -0.23
SEMA4D-220ENST00000492386 RAB11AP62491 216 aa13.6□□□□□ -0.23
SEMA4D-220ENST00000492386 HBG1P69891 147 aa13.6□□□□□ -0.23
SEMA4D-220ENST00000492386 HBG2P69892 147 aa13.6□□□□□ -0.23
SEMA4D-220ENST00000492386 TMPRSS5Q9H3S3 457 aa13.6□□□□□ -0.23
SEMA4D-220ENST00000492386 RNF150Q9ULK6 438 aa13.6□□□□□ -0.23
SEMA4D-220ENST00000492386 FRYQ5TBA9 3013 aa13.6□□□□□ -0.23
SEMA4D-220ENST00000492386 IGHV3-64DA0A0J9YX35 117 aa13.59□□□□□ -0.23
SEMA4D-220ENST00000492386 NXPH2O95156 264 aa13.59□□□□□ -0.23
SEMA4D-220ENST00000492386 FGF8P55075 233 aaPredicted RBP13.59□□□□□ -0.23
SEMA4D-220ENST00000492386 ACSF3Q4G176 576 aaPredicted RBP13.59□□□□□ -0.23
SEMA4D-220ENST00000492386 WDR61Q9GZS3 305 aaKnown RBP13.59□□□□□ -0.23
SEMA4D-220ENST00000492386 SH2D1BO14796 132 aa13.59□□□□□ -0.23
SEMA4D-220ENST00000492386 YIF1AO95070 293 aa13.59□□□□□ -0.23
SEMA4D-220ENST00000492386 SERF2P84101 59 aa13.59□□□□□ -0.23
SEMA4D-220ENST00000492386 ZNF674Q2M3X9 581 aa13.59□□□□□ -0.23
SEMA4D-220ENST00000492386 LILRB2Q8N423 598 aa13.59□□□□□ -0.23
SEMA4D-220ENST00000492386 FGFRL1Q8N441 504 aa13.59□□□□□ -0.23
SEMA4D-220ENST00000492386 CA5BP1Q8WTZ4 195 aa13.59□□□□□ -0.23
SEMA4D-220ENST00000492386 OR4C12Q96R67 309 aa13.59□□□□□ -0.23
SEMA4D-220ENST00000492386 PARD6GQ9BYG4 376 aaPredicted RBP13.59□□□□□ -0.23
SEMA4D-220ENST00000492386 OR51M1Q9H341 326 aa13.59□□□□□ -0.23
SEMA4D-220ENST00000492386 GTF3C1Q12789 2109 aa13.58□□□□□ -0.23
SEMA4D-220ENST00000492386 IFITM10A6NMD0 228 aa13.58□□□□□ -0.24
SEMA4D-220ENST00000492386 B4DEV8 164 aa13.58□□□□□ -0.24
SEMA4D-220ENST00000492386 CD59P13987 128 aa13.58□□□□□ -0.24
SEMA4D-220ENST00000492386 SPANXN5Q5MJ07 72 aa13.58□□□□□ -0.24
SEMA4D-220ENST00000492386 KNTC1P50748 2209 aa13.58□□□□□ -0.24
SEMA4D-220ENST00000492386 GPR179Q6PRD1 2367 aa13.58□□□□□ -0.24
SEMA4D-220ENST00000492386 TRGV5A0A0B4J1U4 118 aa13.58□□□□□ -0.24
SEMA4D-220ENST00000492386 CD46P15529 392 aa13.58□□□□□ -0.24
SEMA4D-220ENST00000492386 SELEP16581 610 aa13.58□□□□□ -0.24
SEMA4D-220ENST00000492386 CEBPDP49716 269 aaPredicted RBP13.58□□□□□ -0.24
SEMA4D-220ENST00000492386 IDH3GP51553 393 aaPredicted RBP13.58□□□□□ -0.24
SEMA4D-220ENST00000492386 TMEM41BQ5BJD5 291 aa13.58□□□□□ -0.24
SEMA4D-220ENST00000492386 ZNF766Q5HY98 468 aa13.58□□□□□ -0.24
SEMA4D-220ENST00000492386 ZNF610Q8N9Z0 462 aa13.58□□□□□ -0.24
SEMA4D-220ENST00000492386 MIOXQ9UGB7 285 aa13.58□□□□□ -0.24
SEMA4D-220ENST00000492386 DIDO1Q9BTC0 2240 aaKnown RBP13.58□□□□□ -0.24
SEMA4D-220ENST00000492386 FAM90A26D6RGX4 464 aa13.57□□□□□ -0.24
SEMA4D-220ENST00000492386 PSPNO60542 156 aa13.57□□□□□ -0.24
SEMA4D-220ENST00000492386 TMEM14EPQ6UXP3 125 aa13.57□□□□□ -0.24
SEMA4D-220ENST00000492386 SLC25A40Q8TBP6 338 aa13.57□□□□□ -0.24
SEMA4D-220ENST00000492386 C5orf30Q96GV9 206 aa13.57□□□□□ -0.24
SEMA4D-220ENST00000492386 CDH20Q9HBT6 801 aa13.57□□□□□ -0.24
SEMA4D-220ENST00000492386 DOK5Q9P104 306 aa13.57□□□□□ -0.24
SEMA4D-220ENST00000492386 RNF212BA8MTL3 300 aa13.57□□□□□ -0.24
SEMA4D-220ENST00000492386 CYB5BO43169 146 aa13.57□□□□□ -0.24
SEMA4D-220ENST00000492386 RAMP3O60896 148 aa13.57□□□□□ -0.24
SEMA4D-220ENST00000492386 HAND1O96004 215 aa13.57□□□□□ -0.24
SEMA4D-220ENST00000492386 RAC2P15153 192 aa13.57□□□□□ -0.24
SEMA4D-220ENST00000492386 CDX1P47902 265 aaPredicted RBP13.57□□□□□ -0.24
SEMA4D-220ENST00000492386 MRPL49Q13405 166 aaKnown RBP13.57□□□□□ -0.24
SEMA4D-220ENST00000492386 OR1L1Q8NH94 360 aa13.57□□□□□ -0.24
SEMA4D-220ENST00000492386 FER1L6-AS2Q96M78 137 aa13.57□□□□□ -0.24
SEMA4D-220ENST00000492386 RBKSQ9H477 322 aa13.57□□□□□ -0.24
SEMA4D-220ENST00000492386 HES4Q9HCC6 221 aa13.57□□□□□ -0.24
SEMA4D-220ENST00000492386 IQCF6A8MYZ5 107 aa13.56□□□□□ -0.24
SEMA4D-220ENST00000492386 GRPP07492 148 aa13.56□□□□□ -0.24
SEMA4D-220ENST00000492386 P0C879 139 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms