RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 SMUG1Q53HV7 270 aa3.05□□□□□ -1.92
SSX2IP-208ENST00000490476 ZNF470Q6ECI4 717 aa3.05□□□□□ -1.92
SSX2IP-208ENST00000490476 WDR82Q6UXN9 313 aa3.05□□□□□ -1.92
SSX2IP-208ENST00000490476 FAM151BQ6UXP7 276 aa3.05□□□□□ -1.92
SSX2IP-208ENST00000490476 SNX20Q7Z614 316 aa3.05□□□□□ -1.92
SSX2IP-208ENST00000490476 OR8K1Q8NGG5 319 aa3.05□□□□□ -1.92
SSX2IP-208ENST00000490476 LINC00167Q96N53 147 aa3.05□□□□□ -1.92
SSX2IP-208ENST00000490476 ZNF382Q96SR6 550 aa3.05□□□□□ -1.92
SSX2IP-208ENST00000490476 GPR21Q99679 349 aa3.05□□□□□ -1.92
SSX2IP-208ENST00000490476 TMEM27Q9HBJ8 222 aa3.05□□□□□ -1.92
SSX2IP-208ENST00000490476 DMAC2Q9NW81 257 aa3.05□□□□□ -1.92
SSX2IP-208ENST00000490476 DNAJC12Q9UKB3 198 aa3.05□□□□□ -1.92
SSX2IP-208ENST00000490476 NUP214P35658 2090 aaPredicted RBP3.05□□□□□ -1.92
SSX2IP-208ENST00000490476 SYNE2Q8WXH0 6885 aaKnown RBP3.05□□□□□ -1.92
SSX2IP-208ENST00000490476 TP53I11O14683 189 aa3.04□□□□□ -1.92
SSX2IP-208ENST00000490476 OPN1SWP03999 348 aa3.04□□□□□ -1.92
SSX2IP-208ENST00000490476 IGHV1-8P0DP01 117 aa3.04□□□□□ -1.92
SSX2IP-208ENST00000490476 CMPK1P30085 196 aa3.04□□□□□ -1.92
SSX2IP-208ENST00000490476 PFN2P35080 140 aa3.04□□□□□ -1.92
SSX2IP-208ENST00000490476 GGT2P36268 569 aa3.04□□□□□ -1.92
SSX2IP-208ENST00000490476 TALDO1P37837 337 aa3.04□□□□□ -1.92
SSX2IP-208ENST00000490476 MNAT1P51948 309 aa3.04□□□□□ -1.92
SSX2IP-208ENST00000490476 AP1S2P56377 157 aa3.04□□□□□ -1.92
SSX2IP-208ENST00000490476 TPI1P60174 286 aa3.04□□□□□ -1.92
SSX2IP-208ENST00000490476 PAFAH1B2P68402 229 aa3.04□□□□□ -1.92
SSX2IP-208ENST00000490476 LRRC63Q05C16 580 aa3.04□□□□□ -1.92
SSX2IP-208ENST00000490476 SLAQ13239 276 aa3.04□□□□□ -1.92
SSX2IP-208ENST00000490476 SLAMF1Q13291 335 aa3.04□□□□□ -1.92
SSX2IP-208ENST00000490476 KIR2DS1Q14954 304 aa3.04□□□□□ -1.92
SSX2IP-208ENST00000490476 C5orf64Q2M2E5 130 aa3.04□□□□□ -1.92
SSX2IP-208ENST00000490476 C6orf183Q5T699 404 aa3.04□□□□□ -1.92
SSX2IP-208ENST00000490476 Q6P435 159 aa3.04□□□□□ -1.92
SSX2IP-208ENST00000490476 CALHM1Q8IU99 346 aa3.04□□□□□ -1.92
SSX2IP-208ENST00000490476 PDZD9Q8IXQ8 264 aa3.04□□□□□ -1.92
SSX2IP-208ENST00000490476 COQ8AQ8NI60 647 aa3.04□□□□□ -1.92
SSX2IP-208ENST00000490476 SDHCQ99643 169 aaPredicted RBP3.04□□□□□ -1.92
SSX2IP-208ENST00000490476 DOK1Q99704 481 aa3.04□□□□□ -1.92
SSX2IP-208ENST00000490476 HSD17B10Q99714 261 aaKnown RBP3.04□□□□□ -1.92
SSX2IP-208ENST00000490476 NDFIP1Q9BT67 221 aa3.04□□□□□ -1.92
SSX2IP-208ENST00000490476 C1QTNF6Q9BXI9 259 aa3.04□□□□□ -1.92
SSX2IP-208ENST00000490476 OR8D2Q9GZM6 311 aa3.04□□□□□ -1.92
SSX2IP-208ENST00000490476 HMG20AQ9NP66 347 aa3.04□□□□□ -1.92
SSX2IP-208ENST00000490476 LZTFL1Q9NQ48 299 aa3.04□□□□□ -1.92
SSX2IP-208ENST00000490476 UBAP1Q9NZ09 502 aa3.04□□□□□ -1.92
SSX2IP-208ENST00000490476 KLK12Q9UKR0 248 aa3.04□□□□□ -1.92
SSX2IP-208ENST00000490476 HYOU1Q9Y4L1 999 aa3.04□□□□□ -1.92
SSX2IP-208ENST00000490476 BZW2Q9Y6E2 419 aaKnown RBP3.04□□□□□ -1.92
SSX2IP-208ENST00000490476 NEBP20929 6669 aa3.04□□□□□ -1.92
SSX2IP-208ENST00000490476 IGHV1-69DA0A0B4J2H0 117 aa3.03□□□□□ -1.92
SSX2IP-208ENST00000490476 IGKV1-8A0A0C4DH67 115 aa3.03□□□□□ -1.92
SSX2IP-208ENST00000490476 A0A0J9YXV3 536 aa3.03□□□□□ -1.92
SSX2IP-208ENST00000490476 HACD1B0YJ81 288 aa3.03□□□□□ -1.92
SSX2IP-208ENST00000490476 H3BN98 237 aa3.03□□□□□ -1.92
SSX2IP-208ENST00000490476 PSMD12O00232 456 aaPredicted RBP3.03□□□□□ -1.92
SSX2IP-208ENST00000490476 ERI3O43414 337 aaKnown RBP3.03□□□□□ -1.92
SSX2IP-208ENST00000490476 CHST10O43529 356 aa3.03□□□□□ -1.92
SSX2IP-208ENST00000490476 SEMA3DO95025 777 aa3.03□□□□□ -1.92
SSX2IP-208ENST00000490476 OR8U9P0C7N5 309 aa3.03□□□□□ -1.92
SSX2IP-208ENST00000490476 MYL9P24844 172 aa3.03□□□□□ -1.92
SSX2IP-208ENST00000490476 PPICP45877 212 aa3.03□□□□□ -1.92
SSX2IP-208ENST00000490476 SYNJ2BPP57105 145 aa3.03□□□□□ -1.92
SSX2IP-208ENST00000490476 STK38Q15208 465 aa3.03□□□□□ -1.92
SSX2IP-208ENST00000490476 ZNF829Q3KNS6 432 aaPredicted RBP3.03□□□□□ -1.92
SSX2IP-208ENST00000490476 Q6ZT83 130 aa3.03□□□□□ -1.92
SSX2IP-208ENST00000490476 LYPD1Q8N2G4 141 aa3.03□□□□□ -1.92
SSX2IP-208ENST00000490476 ASCC1Q8N9N2 400 aaKnown RBP3.03□□□□□ -1.92
SSX2IP-208ENST00000490476 OR10G2Q8NGC3 310 aa3.03□□□□□ -1.92
SSX2IP-208ENST00000490476 OR8U1Q8NH10 309 aa3.03□□□□□ -1.92
SSX2IP-208ENST00000490476 SYNPRQ8TBG9 265 aa3.03□□□□□ -1.92
SSX2IP-208ENST00000490476 MITD1Q8WV92 249 aa3.03□□□□□ -1.92
SSX2IP-208ENST00000490476 BAALCQ8WXS3 180 aa3.03□□□□□ -1.92
SSX2IP-208ENST00000490476 FAM104AQ969W3 186 aa3.03□□□□□ -1.92
SSX2IP-208ENST00000490476 PTX4Q96A99 478 aa3.03□□□□□ -1.92
SSX2IP-208ENST00000490476 HAUS1Q96CS2 278 aa3.03□□□□□ -1.92
SSX2IP-208ENST00000490476 CYYR1Q96J86 154 aa3.03□□□□□ -1.92
SSX2IP-208ENST00000490476 NABP2Q9BQ15 211 aa3.03□□□□□ -1.92
SSX2IP-208ENST00000490476 GAL3ST2Q9H3Q3 398 aa3.03□□□□□ -1.92
SSX2IP-208ENST00000490476 RPP21Q9H633 154 aaKnown RBP3.03□□□□□ -1.92
SSX2IP-208ENST00000490476 DKKL1Q9UK85 242 aa3.03□□□□□ -1.92
SSX2IP-208ENST00000490476 MMACHCQ9Y4U1 282 aa3.03□□□□□ -1.92
SSX2IP-208ENST00000490476 TSSC4Q9Y5U2 329 aaPredicted RBP3.03□□□□□ -1.92
SSX2IP-208ENST00000490476 IGLV1-50A0A075B6I6 118 aa3.02□□□□□ -1.93
SSX2IP-208ENST00000490476 KRTAP9-6A8MVA2 160 aa3.02□□□□□ -1.93
SSX2IP-208ENST00000490476 CLDN25C9JDP6 229 aa3.02□□□□□ -1.93
SSX2IP-208ENST00000490476 NDUFC2-KCTD14E9PQ53 114 aa3.02□□□□□ -1.93
SSX2IP-208ENST00000490476 SNAI2O43623 268 aa3.02□□□□□ -1.93
SSX2IP-208ENST00000490476 SLC16A7O60669 478 aa3.02□□□□□ -1.93
SSX2IP-208ENST00000490476 CBR3O75828 277 aa3.02□□□□□ -1.93
SSX2IP-208ENST00000490476 ETHE1O95571 254 aa3.02□□□□□ -1.93
SSX2IP-208ENST00000490476 PTTG1O95997 202 aa3.02□□□□□ -1.93
SSX2IP-208ENST00000490476 IGF2P01344 180 aa3.02□□□□□ -1.93
SSX2IP-208ENST00000490476 GLAP06280 429 aa3.02□□□□□ -1.93
SSX2IP-208ENST00000490476 TPM1P09493 284 aa3.02□□□□□ -1.93
SSX2IP-208ENST00000490476 OR56A5P0C7T3 313 aa3.02□□□□□ -1.93
SSX2IP-208ENST00000490476 BMI1P35226 326 aa3.02□□□□□ -1.93
SSX2IP-208ENST00000490476 KIR3DL2P43630 455 aa3.02□□□□□ -1.93
SSX2IP-208ENST00000490476 RPL23P62829 140 aaKnown RBP3.02□□□□□ -1.93
SSX2IP-208ENST00000490476 SYCNQ0VAF6 134 aa3.02□□□□□ -1.93
SSX2IP-208ENST00000490476 OR2T5Q6IEZ7 315 aa3.02□□□□□ -1.93
SSX2IP-208ENST00000490476 CYHR1Q6ZMK1 362 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms