RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 SHARPINQ9H0F6 387 aa5.35□□□□□ -1.55
SF3A3-208ENST00000489537 ZNF665Q9H7R5 613 aa5.35□□□□□ -1.55
SF3A3-208ENST00000489537 TAF9BQ9HBM6 251 aa5.35□□□□□ -1.55
SF3A3-208ENST00000489537 KCNJ16Q9NPI9 418 aa5.35□□□□□ -1.55
SF3A3-208ENST00000489537 COA4Q9NYJ1 87 aa5.35□□□□□ -1.55
SF3A3-208ENST00000489537 GSKIPQ9P0R6 139 aa5.35□□□□□ -1.55
SF3A3-208ENST00000489537 OR14J1Q9UGF5 321 aa5.35□□□□□ -1.55
SF3A3-208ENST00000489537 PFDN2Q9UHV9 154 aa5.35□□□□□ -1.55
SF3A3-208ENST00000489537 JPT1Q9UK76 154 aa5.35□□□□□ -1.55
SF3A3-208ENST00000489537 GAB2Q9UQC2 676 aa5.35□□□□□ -1.55
SF3A3-208ENST00000489537 PPP1R3CQ9UQK1 317 aa5.35□□□□□ -1.55
SF3A3-208ENST00000489537 CRYBG3Q68DQ2 2970 aa5.35□□□□□ -1.55
SF3A3-208ENST00000489537 TEX15Q9BXT5 2789 aa5.35□□□□□ -1.55
SF3A3-208ENST00000489537 SPTBN1Q01082 2364 aaKnown RBP5.35□□□□□ -1.55
SF3A3-208ENST00000489537 MED12LQ86YW9 2145 aa5.35□□□□□ -1.55
SF3A3-208ENST00000489537 DOCK7Q96N67 2140 aa5.35□□□□□ -1.55
SF3A3-208ENST00000489537 IGKV1D-8A0A087WSZ0 117 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 TRGV10A0A0A0MS01 117 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 A0A1W2PPH5 198 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 RNF222A6NCQ9 220 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 FAM90A9PA6NNJ1 464 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 C17orf100A8MU93 164 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 ATP6V1G2-DDX39BF2Z307 99 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 F5H0A9 414 aaPredicted RBP5.34□□□□□ -1.55
SF3A3-208ENST00000489537 F8VVB4 439 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 F8VWA3 439 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 SMLR1H3BR10 107 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 K7N7A8 449 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 CCL21O00585 134 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 ABCD4O14678 606 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 YPEL1O60688 119 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 DEDDO75618 318 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 SIX6O95475 246 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 HOXB5P09067 269 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 SCTP09683 121 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 CXCL2P19875 107 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 GNLYP22749 145 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 GNRHRP30968 328 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 CEACAM6P40199 344 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 HTR2BP41595 481 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 NKX2-1P43699 371 aaPredicted RBP5.34□□□□□ -1.55
SF3A3-208ENST00000489537 P2RY1P47900 373 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 RAB5CP51148 216 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 VAMP2P63027 116 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 TAGLNQ01995 201 aaKnown RBP5.34□□□□□ -1.55
SF3A3-208ENST00000489537 MEF2CQ06413 473 aaPredicted RBP5.34□□□□□ -1.55
SF3A3-208ENST00000489537 BAXQ07812 192 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 IL15RAQ13261 267 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 EXOSC2Q13868 293 aaKnown RBP5.34□□□□□ -1.55
SF3A3-208ENST00000489537 ZNF266Q14584 549 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 EFNB3Q15768 340 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 ANKRD55Q3KP44 614 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 IGSF11Q5DX21 431 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 NCMAPQ5T1S8 102 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 DCAF12L2Q5VW00 463 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 TEX36Q5VZQ5 186 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 GGNBP1Q5YKI7 109 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 Q6ZR03 302 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 TBC1D26Q86UD7 250 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 C11orf53Q8IXP5 236 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 ZNF645Q8N7E2 425 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 OR52M1Q8NGK5 317 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 RNASE11Q8TAA1 199 aaKnown RBP5.34□□□□□ -1.55
SF3A3-208ENST00000489537 GLYATL2Q8WU03 294 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 RNF141Q8WVD5 230 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 IL1F10Q8WWZ1 152 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 MSI2Q96DH6 328 aaKnown RBP5.34□□□□□ -1.55
SF3A3-208ENST00000489537 C14orf79Q96F83 325 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 SDSLQ96GA7 329 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 SEC22AQ96IW7 307 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 ADTRPQ96IZ2 230 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 C18orf12Q96KH6 178 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 YPEL2Q96QA6 119 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 HEXA-AS1Q9H8Q6 139 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 MSL2Q9HCI7 577 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 PLSCR3Q9NRY6 295 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 TAS2R3Q9NYW6 316 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 MBD2Q9UBB5 411 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 ERRFI1Q9UJM3 462 aaPredicted RBP5.34□□□□□ -1.55
SF3A3-208ENST00000489537 PRELID3BQ9Y3B1 194 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 CELSR2Q9HCU4 2923 aa5.34□□□□□ -1.55
SF3A3-208ENST00000489537 RP1L1Q8IWN7 2480 aaPredicted RBP5.34□□□□□ -1.56
SF3A3-208ENST00000489537 NOTCH2Q04721 2471 aa5.33□□□□□ -1.56
SF3A3-208ENST00000489537 TRAV14DV4A0A0A6YYC5 116 aa5.33□□□□□ -1.56
SF3A3-208ENST00000489537 hADV38S2A0JD32 116 aa5.33□□□□□ -1.56
SF3A3-208ENST00000489537 ODAMA1E959 279 aa5.33□□□□□ -1.56
SF3A3-208ENST00000489537 FAM221AA4D161 298 aa5.33□□□□□ -1.56
SF3A3-208ENST00000489537 ZSCAN5BA6NJL1 495 aa5.33□□□□□ -1.56
SF3A3-208ENST00000489537 ZNF729A6NN14 1252 aaPredicted RBP5.33□□□□□ -1.56
SF3A3-208ENST00000489537 G3V3Q6 166 aa5.33□□□□□ -1.56
SF3A3-208ENST00000489537 H0YL77 283 aa5.33□□□□□ -1.56
SF3A3-208ENST00000489537 TEX46H3BTG2 121 aa5.33□□□□□ -1.56
SF3A3-208ENST00000489537 LGALS8O00214 317 aa5.33□□□□□ -1.56
SF3A3-208ENST00000489537 HSPB6O14558 160 aa5.33□□□□□ -1.56
SF3A3-208ENST00000489537 TOR1AO14656 332 aa5.33□□□□□ -1.56
SF3A3-208ENST00000489537 RBFOX2O43251 390 aaKnown RBP eCLIP5.33□□□□□ -1.562e-6■□□□□ 9.5
SF3A3-208ENST00000489537 SOX15O60248 233 aa5.33□□□□□ -1.56
SF3A3-208ENST00000489537 PGLYRP1O75594 196 aaPredicted RBP5.33□□□□□ -1.56
SF3A3-208ENST00000489537 WISP2O76076 250 aa5.33□□□□□ -1.56
SF3A3-208ENST00000489537 IGHV1-46P01743 117 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms