RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 CT45A1Q5HYN5 189 aa7.26□□□□□ -1.25
HDAC6-232ENST00000489053 HES5Q5TA89 166 aa7.26□□□□□ -1.25
HDAC6-232ENST00000489053 SIGIRRQ6IA17 410 aa7.26□□□□□ -1.25
HDAC6-232ENST00000489053 TMEM91Q6ZNR0 172 aa7.26□□□□□ -1.25
HDAC6-232ENST00000489053 LYPD6Q86Y78 171 aa7.26□□□□□ -1.25
HDAC6-232ENST00000489053 GAPTQ8N292 157 aa7.26□□□□□ -1.25
HDAC6-232ENST00000489053 COMMD1Q8N668 190 aa7.26□□□□□ -1.25
HDAC6-232ENST00000489053 CT45A3Q8NHU0 189 aa7.26□□□□□ -1.25
HDAC6-232ENST00000489053 DPF1Q92782 380 aa7.26□□□□□ -1.25
HDAC6-232ENST00000489053 RAB3CQ96E17 227 aa7.26□□□□□ -1.25
HDAC6-232ENST00000489053 MBNL3Q9NUK0 354 aaKnown RBP7.26□□□□□ -1.25
HDAC6-232ENST00000489053 LIN7CQ9NUP9 197 aaKnown RBP7.26□□□□□ -1.25
HDAC6-232ENST00000489053 NDUFB11Q9NX14 153 aa7.26□□□□□ -1.25
HDAC6-232ENST00000489053 SLC23A1Q9UHI7 598 aa7.26□□□□□ -1.25
HDAC6-232ENST00000489053 RAB22AQ9UL26 194 aa7.26□□□□□ -1.25
HDAC6-232ENST00000489053 TRAV1-2A0A0B4J238 106 aa7.25□□□□□ -1.25
HDAC6-232ENST00000489053 H7C2Y5 167 aa7.25□□□□□ -1.25
HDAC6-232ENST00000489053 SOCS1O15524 211 aa7.25□□□□□ -1.25
HDAC6-232ENST00000489053 WIPF1O43516 503 aa7.25□□□□□ -1.25
HDAC6-232ENST00000489053 YPEL1O60688 119 aa7.25□□□□□ -1.25
HDAC6-232ENST00000489053 RAB3BP20337 219 aa7.25□□□□□ -1.25
HDAC6-232ENST00000489053 GP2P55259 537 aaKnown RBP7.25□□□□□ -1.25
HDAC6-232ENST00000489053 HLA-DRB3P79483 266 aa7.25□□□□□ -1.25
HDAC6-232ENST00000489053 LSAMPQ13449 338 aa7.25□□□□□ -1.25
HDAC6-232ENST00000489053 ARFRP1Q13795 201 aa7.25□□□□□ -1.25
HDAC6-232ENST00000489053 GNMTQ14749 295 aa7.25□□□□□ -1.25
HDAC6-232ENST00000489053 HMGN3Q15651 99 aa7.25□□□□□ -1.25
HDAC6-232ENST00000489053 C2orf76Q3KRA6 126 aa7.25□□□□□ -1.25
HDAC6-232ENST00000489053 CXorf66Q5JRM2 361 aaPredicted RBP7.25□□□□□ -1.25
HDAC6-232ENST00000489053 C22orf42Q6IC83 251 aa7.25□□□□□ -1.25
HDAC6-232ENST00000489053 ZNF329Q86UD4 541 aa7.25□□□□□ -1.25
HDAC6-232ENST00000489053 PHF21AQ96BD5 680 aa7.25□□□□□ -1.25
HDAC6-232ENST00000489053 YPEL2Q96QA6 119 aa7.25□□□□□ -1.25
HDAC6-232ENST00000489053 YTHDF1Q9BYJ9 559 aaKnown RBP7.25□□□□□ -1.25
HDAC6-232ENST00000489053 LPAR5Q9H1C0 372 aa7.25□□□□□ -1.25
HDAC6-232ENST00000489053 GHITMQ9H3K2 345 aa7.25□□□□□ -1.25
HDAC6-232ENST00000489053 VCX3AQ9NNX9 186 aa7.25□□□□□ -1.25
HDAC6-232ENST00000489053 PIPOXQ9P0Z9 390 aa7.25□□□□□ -1.25
HDAC6-232ENST00000489053 AK3Q9UIJ7 227 aa7.25□□□□□ -1.25
HDAC6-232ENST00000489053 ZNF221Q9UK13 617 aa7.25□□□□□ -1.25
HDAC6-232ENST00000489053 HSF4Q9ULV5 492 aa7.25□□□□□ -1.25
HDAC6-232ENST00000489053 SSR3Q9UNL2 185 aa7.25□□□□□ -1.25
HDAC6-232ENST00000489053 RBM7Q9Y580 266 aaKnown RBP7.25□□□□□ -1.25
HDAC6-232ENST00000489053 DSCAML1Q8TD84 2053 aa7.24□□□□□ -1.25
HDAC6-232ENST00000489053 TRDV1A0A1B0GX56 115 aa7.24□□□□□ -1.25
HDAC6-232ENST00000489053 IFITM5A6NNB3 132 aa7.24□□□□□ -1.25
HDAC6-232ENST00000489053 RAB29O14966 203 aa7.24□□□□□ -1.25
HDAC6-232ENST00000489053 ST8SIA5O15466 376 aa7.24□□□□□ -1.25
HDAC6-232ENST00000489053 AMY1AP04745 511 aa7.24□□□□□ -1.25
HDAC6-232ENST00000489053 AMY2AP04746 511 aa7.24□□□□□ -1.25
HDAC6-232ENST00000489053 GSTP1P09211 210 aaKnown RBP7.24□□□□□ -1.25
HDAC6-232ENST00000489053 OR5H8P0DN80 308 aa7.24□□□□□ -1.25
HDAC6-232ENST00000489053 SLC2A2P11168 524 aaPredicted RBP7.24□□□□□ -1.25
HDAC6-232ENST00000489053 CEACAM6P40199 344 aa7.24□□□□□ -1.25
HDAC6-232ENST00000489053 GPR12P47775 334 aa7.24□□□□□ -1.25
HDAC6-232ENST00000489053 OR3A3P47888 321 aa7.24□□□□□ -1.25
HDAC6-232ENST00000489053 ZNF134P52741 427 aa7.24□□□□□ -1.25
HDAC6-232ENST00000489053 ZNF137PP52743 207 aa7.24□□□□□ -1.25
HDAC6-232ENST00000489053 RAB25P57735 213 aa7.24□□□□□ -1.25
HDAC6-232ENST00000489053 CD83Q01151 205 aa7.24□□□□□ -1.25
HDAC6-232ENST00000489053 CBX3Q13185 183 aa7.24□□□□□ -1.25
HDAC6-232ENST00000489053 EBI3Q14213 229 aa7.24□□□□□ -1.25
HDAC6-232ENST00000489053 KIR2DS1Q14954 304 aa7.24□□□□□ -1.25
HDAC6-232ENST00000489053 ARL6IP1Q15041 203 aa7.24□□□□□ -1.25
HDAC6-232ENST00000489053 FAM53AQ6NSI3 398 aaPredicted RBP7.24□□□□□ -1.25
HDAC6-232ENST00000489053 TEX38Q6PEX7 206 aa7.24□□□□□ -1.25
HDAC6-232ENST00000489053 TMEM65Q6PI78 240 aa7.24□□□□□ -1.25
HDAC6-232ENST00000489053 STPG2Q8N412 459 aa7.24□□□□□ -1.25
HDAC6-232ENST00000489053 ZNF439Q8NDP4 499 aa7.24□□□□□ -1.25
HDAC6-232ENST00000489053 ABHD5Q8WTS1 349 aa7.24□□□□□ -1.25
HDAC6-232ENST00000489053 ARHGAP5-AS1Q96IT6 56 aa7.24□□□□□ -1.25
HDAC6-232ENST00000489053 NOL4LQ96MY1 436 aaPredicted RBP7.24□□□□□ -1.25
HDAC6-232ENST00000489053 GINS4Q9BRT9 223 aa7.24□□□□□ -1.25
HDAC6-232ENST00000489053 CENPOQ9BU64 300 aa7.24□□□□□ -1.25
HDAC6-232ENST00000489053 PECRQ9BY49 303 aa7.24□□□□□ -1.25
HDAC6-232ENST00000489053 MRPL20Q9BYC9 149 aaKnown RBP7.24□□□□□ -1.25
HDAC6-232ENST00000489053 GPR61Q9BZJ8 451 aa7.24□□□□□ -1.25
HDAC6-232ENST00000489053 ATG5Q9H1Y0 275 aa7.24□□□□□ -1.25
HDAC6-232ENST00000489053 ZNF107Q9UII5 783 aaPredicted RBP7.24□□□□□ -1.25
HDAC6-232ENST00000489053 LINC00527Q9UJ94 153 aa7.24□□□□□ -1.25
HDAC6-232ENST00000489053 NOTCH3Q9UM47 2321 aa7.24□□□□□ -1.25
HDAC6-232ENST00000489053 SAA2-SAA4A0A096LPE2 208 aa7.23□□□□□ -1.25
HDAC6-232ENST00000489053 A0A0A6YYD4 124 aa7.23□□□□□ -1.25
HDAC6-232ENST00000489053 TMEM272A0A1B0GTI8 110 aa7.23□□□□□ -1.25
HDAC6-232ENST00000489053 TRDCB7Z8K6 153 aa7.23□□□□□ -1.25
HDAC6-232ENST00000489053 G3V4G9 280 aa7.23□□□□□ -1.25
HDAC6-232ENST00000489053 BET1O15155 118 aa7.23□□□□□ -1.25
HDAC6-232ENST00000489053 NBR2O15453 112 aa7.23□□□□□ -1.25
HDAC6-232ENST00000489053 SCGNO76038 276 aa7.23□□□□□ -1.25
HDAC6-232ENST00000489053 NAPSAO96009 420 aa7.23□□□□□ -1.25
HDAC6-232ENST00000489053 IGHG2P01859 326 aa7.23□□□□□ -1.25
HDAC6-232ENST00000489053 APOA2P02652 100 aa7.23□□□□□ -1.25
HDAC6-232ENST00000489053 SAA2P0DJI9 122 aaPredicted RBP7.23□□□□□ -1.25
HDAC6-232ENST00000489053 GALP22466 123 aa7.23□□□□□ -1.25
HDAC6-232ENST00000489053 SLC6A1P30531 599 aa7.23□□□□□ -1.25
HDAC6-232ENST00000489053 SERPINB10P48595 397 aa7.23□□□□□ -1.25
HDAC6-232ENST00000489053 ACTBP60709 375 aa7.23□□□□□ -1.25
HDAC6-232ENST00000489053 QRFPP83859 136 aa7.23□□□□□ -1.25
HDAC6-232ENST00000489053 SSX1Q16384 188 aa7.23□□□□□ -1.25
HDAC6-232ENST00000489053 PNLIPRP3Q17RR3 467 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms