RNA–Protein interactions for RNA: ENST00000482614.5

EXOSC3-205, Transcript of exosome component 3, humanhuman

TSL 5

Gene EXOSC3, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-205ENST00000482614 RIMS4Q9H426 269 aaPredicted RBP12.14□□□□□ -0.47
EXOSC3-205ENST00000482614 CHMP1AQ9HD42 196 aaPredicted RBP12.14□□□□□ -0.47
EXOSC3-205ENST00000482614 NOTCH1P46531 2555 aa12.14□□□□□ -0.47
EXOSC3-205ENST00000482614 A0A0A6YYD4 124 aa12.13□□□□□ -0.47
EXOSC3-205ENST00000482614 ZNF736B4DX44 427 aaPredicted RBP12.13□□□□□ -0.47
EXOSC3-205ENST00000482614 SOCS1O15524 211 aa12.13□□□□□ -0.47
EXOSC3-205ENST00000482614 ATP6V1G2O95670 118 aa12.13□□□□□ -0.47
EXOSC3-205ENST00000482614 NAPSAO96009 420 aa12.13□□□□□ -0.47
EXOSC3-205ENST00000482614 OXLD1Q5BKU9 147 aa12.13□□□□□ -0.47
EXOSC3-205ENST00000482614 MOB1BQ7L9L4 216 aa12.13□□□□□ -0.47
EXOSC3-205ENST00000482614 ZNF329Q86UD4 541 aa12.13□□□□□ -0.47
EXOSC3-205ENST00000482614 SVOPQ8N4V2 548 aa12.13□□□□□ -0.47
EXOSC3-205ENST00000482614 COMMD1Q8N668 190 aa12.13□□□□□ -0.47
EXOSC3-205ENST00000482614 SETD6Q8TBK2 473 aa12.13□□□□□ -0.47
EXOSC3-205ENST00000482614 S1PR3Q99500 378 aa12.13□□□□□ -0.47
EXOSC3-205ENST00000482614 RASL11BQ9BPW5 248 aa12.13□□□□□ -0.47
EXOSC3-205ENST00000482614 PLSCR3Q9NRY6 295 aa12.13□□□□□ -0.47
EXOSC3-205ENST00000482614 STEAP1Q9UHE8 339 aa12.13□□□□□ -0.47
EXOSC3-205ENST00000482614 HSF4Q9ULV5 492 aa12.13□□□□□ -0.47
EXOSC3-205ENST00000482614 V9GY05 133 aa12.13□□□□□ -0.47
EXOSC3-205ENST00000482614 PRKDCP78527 4128 aaKnown RBP12.13□□□□□ -0.47
EXOSC3-205ENST00000482614 TRBV6-6A0A0A6YYG2 114 aa12.12□□□□□ -0.47
EXOSC3-205ENST00000482614 AP4M1O00189 453 aa12.12□□□□□ -0.47
EXOSC3-205ENST00000482614 LSAMPQ13449 338 aa12.12□□□□□ -0.47
EXOSC3-205ENST00000482614 ODF3L1Q8IXM7 274 aa12.12□□□□□ -0.47
EXOSC3-205ENST00000482614 STPG2Q8N412 459 aa12.12□□□□□ -0.47
EXOSC3-205ENST00000482614 OR2AK2Q8NG84 335 aa12.12□□□□□ -0.47
EXOSC3-205ENST00000482614 OR51D1Q8NGF3 324 aa12.12□□□□□ -0.47
EXOSC3-205ENST00000482614 IL1F10Q8WWZ1 152 aa12.12□□□□□ -0.47
EXOSC3-205ENST00000482614 FAM3DQ96BQ1 224 aa12.12□□□□□ -0.47
EXOSC3-205ENST00000482614 GON7Q9BXV9 100 aa12.12□□□□□ -0.47
EXOSC3-205ENST00000482614 ZFP57Q9NU63 452 aa12.12□□□□□ -0.47
EXOSC3-205ENST00000482614 LINC00527Q9UJ94 153 aa12.12□□□□□ -0.47
EXOSC3-205ENST00000482614 MGAT4AQ9UM21 535 aa12.12□□□□□ -0.47
EXOSC3-205ENST00000482614 PDCD5O14737 125 aa12.11□□□□□ -0.47
EXOSC3-205ENST00000482614 MRPS14O60783 128 aaKnown RBP12.11□□□□□ -0.47
EXOSC3-205ENST00000482614 GPR12P47775 334 aa12.11□□□□□ -0.47
EXOSC3-205ENST00000482614 VEGFCP49767 419 aa12.11□□□□□ -0.47
EXOSC3-205ENST00000482614 TMEM50BP56557 158 aa12.11□□□□□ -0.47
EXOSC3-205ENST00000482614 GABARAPL2P60520 117 aa12.11□□□□□ -0.47
EXOSC3-205ENST00000482614 SSX1Q16384 188 aa12.11□□□□□ -0.47
EXOSC3-205ENST00000482614 C2orf76Q3KRA6 126 aa12.11□□□□□ -0.47
EXOSC3-205ENST00000482614 ZNF833PQ6ZTB9 187 aa12.11□□□□□ -0.47
EXOSC3-205ENST00000482614 REC114Q7Z4M0 266 aa12.11□□□□□ -0.47
EXOSC3-205ENST00000482614 OR56B1Q8NGI3 324 aa12.11□□□□□ -0.47
EXOSC3-205ENST00000482614 AK3Q9UIJ7 227 aa12.11□□□□□ -0.47
EXOSC3-205ENST00000482614 TRAV1-2A0A0B4J238 106 aa12.1□□□□□ -0.47
EXOSC3-205ENST00000482614 LINC01548A6NM66 108 aa12.1□□□□□ -0.47
EXOSC3-205ENST00000482614 FOXI3A8MTJ6 420 aaPredicted RBP12.1□□□□□ -0.47
EXOSC3-205ENST00000482614 DENRO43583 198 aaKnown RBP12.1□□□□□ -0.47
EXOSC3-205ENST00000482614 RRP9O43818 475 aaKnown RBP12.1□□□□□ -0.47
EXOSC3-205ENST00000482614 F2RL1P55085 397 aa12.1□□□□□ -0.47
EXOSC3-205ENST00000482614 CLDN12P56749 244 aa12.1□□□□□ -0.47
EXOSC3-205ENST00000482614 RPL23AP62750 156 aaKnown RBP12.1□□□□□ -0.47
EXOSC3-205ENST00000482614 FAM71F2Q6NXP2 309 aa12.1□□□□□ -0.47
EXOSC3-205ENST00000482614 FAM71E2Q8N5Q1 922 aa12.1□□□□□ -0.47
EXOSC3-205ENST00000482614 NABP2Q9BQ15 211 aa12.1□□□□□ -0.47
EXOSC3-205ENST00000482614 PECRQ9BY49 303 aa12.1□□□□□ -0.47
EXOSC3-205ENST00000482614 Q9H521 79 aa12.1□□□□□ -0.47
EXOSC3-205ENST00000482614 NDUFB11Q9NX14 153 aa12.1□□□□□ -0.47
EXOSC3-205ENST00000482614 PIPOXQ9P0Z9 390 aa12.1□□□□□ -0.47
EXOSC3-205ENST00000482614 RAB22AQ9UL26 194 aa12.1□□□□□ -0.47
EXOSC3-205ENST00000482614 SAA2-SAA4A0A096LPE2 208 aa12.09□□□□□ -0.47
EXOSC3-205ENST00000482614 TRDV1A0A1B0GX56 115 aa12.09□□□□□ -0.47
EXOSC3-205ENST00000482614 ITGB1BP1O14713 200 aa12.09□□□□□ -0.47
EXOSC3-205ENST00000482614 LDLRAD4O15165 306 aa12.09□□□□□ -0.47
EXOSC3-205ENST00000482614 SAA2P0DJI9 122 aaPredicted RBP12.09□□□□□ -0.47
EXOSC3-205ENST00000482614 MYL9P24844 172 aa12.09□□□□□ -0.47
EXOSC3-205ENST00000482614 SLC6A1P30531 599 aa12.09□□□□□ -0.47
EXOSC3-205ENST00000482614 SOX6P35712 828 aa12.09□□□□□ -0.47
EXOSC3-205ENST00000482614 HLA-DRB3P79483 266 aa12.09□□□□□ -0.47
EXOSC3-205ENST00000482614 PNLIPRP3Q17RR3 467 aa12.09□□□□□ -0.47
EXOSC3-205ENST00000482614 HES5Q5TA89 166 aa12.09□□□□□ -0.47
EXOSC3-205ENST00000482614 TEX38Q6PEX7 206 aa12.09□□□□□ -0.47
EXOSC3-205ENST00000482614 CD200R1LQ6Q8B3 271 aa12.09□□□□□ -0.47
EXOSC3-205ENST00000482614 Q6ZPA2 131 aa12.09□□□□□ -0.47
EXOSC3-205ENST00000482614 PHF21AQ96BD5 680 aa12.09□□□□□ -0.47
EXOSC3-205ENST00000482614 ARHGAP5-AS1Q96IT6 56 aa12.09□□□□□ -0.47
EXOSC3-205ENST00000482614 CMSS1Q9BQ75 279 aaKnown RBP12.09□□□□□ -0.47
EXOSC3-205ENST00000482614 HDHD3Q9BSH5 251 aaPredicted RBP12.09□□□□□ -0.47
EXOSC3-205ENST00000482614 MRPL20Q9BYC9 149 aaKnown RBP12.09□□□□□ -0.47
EXOSC3-205ENST00000482614 IFI27L2Q9H2X8 130 aa12.09□□□□□ -0.47
EXOSC3-205ENST00000482614 GHITMQ9H3K2 345 aa12.09□□□□□ -0.47
EXOSC3-205ENST00000482614 Q9N2K0 584 aa12.09□□□□□ -0.47
EXOSC3-205ENST00000482614 NECAP2Q9NVZ3 263 aa12.09□□□□□ -0.47
EXOSC3-205ENST00000482614 TMEM272A0A1B0GTI8 110 aa12.08□□□□□ -0.48
EXOSC3-205ENST00000482614 NUDT19A8MXV4 375 aa12.08□□□□□ -0.48
EXOSC3-205ENST00000482614 RAB29O14966 203 aa12.08□□□□□ -0.48
EXOSC3-205ENST00000482614 DUS4LO95620 317 aaKnown RBP12.08□□□□□ -0.48
EXOSC3-205ENST00000482614 IGLL1P15814 213 aa12.08□□□□□ -0.48
EXOSC3-205ENST00000482614 GALP22466 123 aa12.08□□□□□ -0.48
EXOSC3-205ENST00000482614 ZBTB25P24278 435 aa12.08□□□□□ -0.48
EXOSC3-205ENST00000482614 OR3A3P47888 321 aa12.08□□□□□ -0.48
EXOSC3-205ENST00000482614 ACTBP60709 375 aa12.08□□□□□ -0.48
EXOSC3-205ENST00000482614 MMDQ15546 238 aa12.08□□□□□ -0.48
EXOSC3-205ENST00000482614 EDARADDQ8WWZ3 215 aa12.08□□□□□ -0.48
EXOSC3-205ENST00000482614 RCC1LQ96I51 464 aaKnown RBP12.08□□□□□ -0.48
EXOSC3-205ENST00000482614 ZNF251Q9BRH9 671 aa12.08□□□□□ -0.48
EXOSC3-205ENST00000482614 YTHDF1Q9BYJ9 559 aaKnown RBP12.08□□□□□ -0.48
EXOSC3-205ENST00000482614 C12orf4Q9NQ89 552 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 151.5 ms