RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 HERPUD1Q15011 391 aa10.86□□□□□ -0.67
VPS52-218ENST00000482399 AGBL5Q8NDL9 886 aa10.86□□□□□ -0.67
VPS52-218ENST00000482399 OR10G4Q8NGN3 311 aa10.86□□□□□ -0.67
VPS52-218ENST00000482399 OR10G9Q8NGN4 311 aa10.86□□□□□ -0.67
VPS52-218ENST00000482399 OR10G7Q8NGN6 311 aa10.86□□□□□ -0.67
VPS52-218ENST00000482399 SSC4DQ8WTU2 575 aa10.86□□□□□ -0.67
VPS52-218ENST00000482399 OR2W1Q9Y3N9 320 aa10.86□□□□□ -0.67
VPS52-218ENST00000482399 ADAMTS9Q9P2N4 1935 aa10.86□□□□□ -0.67
VPS52-218ENST00000482399 PGPEP1LA6NFU8 196 aa10.86□□□□□ -0.67
VPS52-218ENST00000482399 CTSSP25774 331 aa10.86□□□□□ -0.67
VPS52-218ENST00000482399 PCOLCEQ15113 449 aa10.86□□□□□ -0.67
VPS52-218ENST00000482399 C20orf204Q6ZNR8 217 aa10.86□□□□□ -0.67
VPS52-218ENST00000482399 REC114Q7Z4M0 266 aa10.86□□□□□ -0.67
VPS52-218ENST00000482399 C17orf82Q86X59 251 aaPredicted RBP10.86□□□□□ -0.67
VPS52-218ENST00000482399 FAM58AQ8N1B3 248 aa10.86□□□□□ -0.67
VPS52-218ENST00000482399 SMDT1Q9H4I9 107 aa10.86□□□□□ -0.67
VPS52-218ENST00000482399 SPTA1P02549 2419 aa10.86□□□□□ -0.67
VPS52-218ENST00000482399 A0A1B0GUS0 222 aa10.86□□□□□ -0.67
VPS52-218ENST00000482399 CTXN2P0C2S0 81 aa10.86□□□□□ -0.67
VPS52-218ENST00000482399 CRYGSP22914 178 aa10.86□□□□□ -0.67
VPS52-218ENST00000482399 CYB561P49447 251 aa10.86□□□□□ -0.67
VPS52-218ENST00000482399 MEF2BQ02080 365 aaPredicted RBP10.86□□□□□ -0.67
VPS52-218ENST00000482399 ID3Q02535 119 aa10.86□□□□□ -0.67
VPS52-218ENST00000482399 PNRC1Q12796 327 aaPredicted RBP10.86□□□□□ -0.67
VPS52-218ENST00000482399 LRTM2Q8N967 370 aa10.86□□□□□ -0.67
VPS52-218ENST00000482399 OR51G1Q8NGK1 321 aa10.86□□□□□ -0.67
VPS52-218ENST00000482399 OR1P1Q8NH06 330 aa10.86□□□□□ -0.67
VPS52-218ENST00000482399 TMEM18Q96B42 140 aa10.86□□□□□ -0.67
VPS52-218ENST00000482399 CHD3Q12873 2000 aaKnown RBP10.86□□□□□ -0.67
VPS52-218ENST00000482399 UCP3P55916 312 aa10.85□□□□□ -0.67
VPS52-218ENST00000482399 HOXA4Q00056 320 aaPredicted RBP10.85□□□□□ -0.67
VPS52-218ENST00000482399 SLC25A53Q5H9E4 307 aa10.85□□□□□ -0.67
VPS52-218ENST00000482399 Q6ZPA2 131 aa10.85□□□□□ -0.67
VPS52-218ENST00000482399 CADM4Q8NFZ8 388 aa10.85□□□□□ -0.67
VPS52-218ENST00000482399 FAM103A1Q9BTL3 118 aaKnown RBP10.85□□□□□ -0.67
VPS52-218ENST00000482399 SAMD10Q9BYL1 202 aa10.85□□□□□ -0.67
VPS52-218ENST00000482399 TUBG2Q9NRH3 451 aa10.85□□□□□ -0.67
VPS52-218ENST00000482399 KCNIP1Q9NZI2 227 aa10.85□□□□□ -0.67
VPS52-218ENST00000482399 TAAR3PQ9P1P4 343 aa10.85□□□□□ -0.67
VPS52-218ENST00000482399 NAT8Q9UHE5 227 aa10.85□□□□□ -0.67
VPS52-218ENST00000482399 PATE3B3GLJ2 98 aa10.85□□□□□ -0.67
VPS52-218ENST00000482399 TFF1P04155 84 aa10.85□□□□□ -0.67
VPS52-218ENST00000482399 UCP1P25874 307 aa10.85□□□□□ -0.67
VPS52-218ENST00000482399 PMELP40967 661 aa10.85□□□□□ -0.67
VPS52-218ENST00000482399 EXT1Q16394 746 aa10.85□□□□□ -0.67
VPS52-218ENST00000482399 SSX7Q7RTT5 188 aa10.85□□□□□ -0.67
VPS52-218ENST00000482399 MRGPRGQ86SM5 289 aa10.85□□□□□ -0.67
VPS52-218ENST00000482399 C1QL4Q86Z23 238 aa10.85□□□□□ -0.67
VPS52-218ENST00000482399 OR10P1Q8NGE3 313 aa10.85□□□□□ -0.67
VPS52-218ENST00000482399 OR2T10Q8NGZ9 312 aa10.85□□□□□ -0.67
VPS52-218ENST00000482399 CHRNA10Q9GZZ6 450 aa10.85□□□□□ -0.67
VPS52-218ENST00000482399 OBP2BQ9NPH6 170 aa10.85□□□□□ -0.67
VPS52-218ENST00000482399 IL17BQ9UHF5 180 aa10.85□□□□□ -0.67
VPS52-218ENST00000482399 ATP23Q9Y6H3 246 aa10.85□□□□□ -0.67
VPS52-218ENST00000482399 A0A1B0GU03 582 aa10.84□□□□□ -0.67
VPS52-218ENST00000482399 GRIFINA4D1Z8 144 aa10.84□□□□□ -0.67
VPS52-218ENST00000482399 CDIPTO14735 213 aa10.84□□□□□ -0.67
VPS52-218ENST00000482399 IGLV3-19P01714 112 aa10.84□□□□□ -0.67
VPS52-218ENST00000482399 FAM90A2PQ658T7 463 aa10.84□□□□□ -0.67
VPS52-218ENST00000482399 FADS6Q8N9I5 356 aa10.84□□□□□ -0.67
VPS52-218ENST00000482399 DUSP23Q9BVJ7 150 aa10.84□□□□□ -0.67
VPS52-218ENST00000482399 PARLQ9H300 379 aa10.84□□□□□ -0.67
VPS52-218ENST00000482399 SDF2L1Q9HCN8 221 aa10.84□□□□□ -0.67
VPS52-218ENST00000482399 PKDREJQ9NTG1 2253 aa10.84□□□□□ -0.67
VPS52-218ENST00000482399 IGKV1-6A0A0C4DH72 117 aa10.84□□□□□ -0.67
VPS52-218ENST00000482399 AMBPP02760 352 aa10.84□□□□□ -0.67
VPS52-218ENST00000482399 OTX1P32242 354 aaPredicted RBP10.84□□□□□ -0.67
VPS52-218ENST00000482399 THBS3P49746 956 aa10.84□□□□□ -0.67
VPS52-218ENST00000482399 FGF12P61328 243 aa10.84□□□□□ -0.67
VPS52-218ENST00000482399 FAM53AQ6NSI3 398 aaPredicted RBP10.84□□□□□ -0.67
VPS52-218ENST00000482399 KCNIP4Q6PIL6 250 aa10.84□□□□□ -0.67
VPS52-218ENST00000482399 TOMM20LQ6UXN7 152 aa10.84□□□□□ -0.67
VPS52-218ENST00000482399 KDF1Q8NAX2 398 aaPredicted RBP10.84□□□□□ -0.67
VPS52-218ENST00000482399 TMEM56Q96MV1 263 aa10.84□□□□□ -0.67
VPS52-218ENST00000482399 SIGLEC12Q96PQ1 595 aa10.84□□□□□ -0.67
VPS52-218ENST00000482399 HES7Q9BYE0 225 aa10.84□□□□□ -0.67
VPS52-218ENST00000482399 OR2D2Q9H210 308 aa10.84□□□□□ -0.67
VPS52-218ENST00000482399 TRAPPC1Q9Y5R8 145 aa10.84□□□□□ -0.67
VPS52-218ENST00000482399 TMEM56-RWDD3S4R434 201 aa10.84□□□□□ -0.67
VPS52-218ENST00000482399 C1QTNF9BB2RNN3 333 aa10.84□□□□□ -0.67
VPS52-218ENST00000482399 SLC31A2O15432 143 aa10.84□□□□□ -0.67
VPS52-218ENST00000482399 GALR2O43603 387 aaPredicted RBP10.84□□□□□ -0.67
VPS52-218ENST00000482399 LILRA1O75019 489 aa10.84□□□□□ -0.67
VPS52-218ENST00000482399 SSTP61278 116 aa10.84□□□□□ -0.67
VPS52-218ENST00000482399 NMSQ5H8A3 153 aa10.84□□□□□ -0.67
VPS52-218ENST00000482399 GCM1Q9NP62 436 aa10.84□□□□□ -0.67
VPS52-218ENST00000482399 FZR1Q9UM11 496 aa10.84□□□□□ -0.67
VPS52-218ENST00000482399 NBASA2RRP1 2371 aa10.83□□□□□ -0.68
VPS52-218ENST00000482399 B4DEV8 164 aa10.83□□□□□ -0.68
VPS52-218ENST00000482399 H0Y980 276 aa10.83□□□□□ -0.68
VPS52-218ENST00000482399 CELA3AP09093 270 aa10.83□□□□□ -0.68
VPS52-218ENST00000482399 OR3A1P47881 315 aa10.83□□□□□ -0.68
VPS52-218ENST00000482399 LINC00205P59089 165 aa10.83□□□□□ -0.68
VPS52-218ENST00000482399 PRSS8Q16651 343 aa10.83□□□□□ -0.68
VPS52-218ENST00000482399 PDLIM3Q53GG5 364 aaPredicted RBP10.83□□□□□ -0.68
VPS52-218ENST00000482399 TAF15Q92804 592 aaKnown RBP eCLIP10.83□□□□□ -0.68
VPS52-218ENST00000482399 APH1AQ96BI3 265 aa10.83□□□□□ -0.68
VPS52-218ENST00000482399 DDA1Q9BW61 102 aa10.83□□□□□ -0.68
VPS52-218ENST00000482399 IGLV3-12A0A075B6K2 115 aa10.83□□□□□ -0.68
VPS52-218ENST00000482399 A0A087WWC5 75 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms