RNA–Protein interactions for RNA: ENST00000476556.5

RERE-212, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 1 (best) BASIC

Gene RERE, Length 4,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-212ENST00000476556 COA4Q9NYJ1 87 aa11.32□□□□□ -0.6
RERE-212ENST00000476556 CISD1Q9NZ45 108 aaKnown RBP11.32□□□□□ -0.6
RERE-212ENST00000476556 SNRNP200O75643 2136 aaKnown RBP11.32□□□□□ -0.6
RERE-212ENST00000476556 FAM90A10PA6NDY2 464 aa11.31□□□□□ -0.6
RERE-212ENST00000476556 FAM90A18PA6NE21 464 aa11.31□□□□□ -0.6
RERE-212ENST00000476556 FAM90A16PA6NEW6 464 aa11.31□□□□□ -0.6
RERE-212ENST00000476556 FAM90A20PA6NIJ5 464 aa11.31□□□□□ -0.6
RERE-212ENST00000476556 FAM90A8PA6NJQ4 464 aa11.31□□□□□ -0.6
RERE-212ENST00000476556 FAM90A7PA6NKC0 464 aa11.31□□□□□ -0.6
RERE-212ENST00000476556 FAM90A22PA8MWA6 464 aa11.31□□□□□ -0.6
RERE-212ENST00000476556 FAM90A12PA8MX19 464 aa11.31□□□□□ -0.6
RERE-212ENST00000476556 FAM90A5PA8MXJ8 464 aa11.31□□□□□ -0.6
RERE-212ENST00000476556 FAM90A23PA8MXZ1 464 aa11.31□□□□□ -0.6
RERE-212ENST00000476556 FAM90A15PP0C7V4 464 aa11.31□□□□□ -0.6
RERE-212ENST00000476556 FAM90A13PP0C7W8 464 aa11.31□□□□□ -0.6
RERE-212ENST00000476556 FAM90A14PP0C7W9 464 aa11.31□□□□□ -0.6
RERE-212ENST00000476556 FAM90A24PP0C7X0 464 aa11.31□□□□□ -0.6
RERE-212ENST00000476556 CNN1P51911 297 aaKnown RBP11.31□□□□□ -0.6
RERE-212ENST00000476556 HNRNPA3P51991 378 aaKnown RBP11.31□□□□□ -0.6
RERE-212ENST00000476556 LINC00469Q8N7U9 141 aa11.31□□□□□ -0.6
RERE-212ENST00000476556 CT55Q8WUE5 264 aa11.31□□□□□ -0.6
RERE-212ENST00000476556 AKIRIN1Q9H9L7 192 aaPredicted RBP11.31□□□□□ -0.6
RERE-212ENST00000476556 HS3ST3B1Q9Y662 390 aa11.31□□□□□ -0.6
RERE-212ENST00000476556 LOC102723971A0A1B0GUV8 181 aa11.31□□□□□ -0.6
RERE-212ENST00000476556 A0A1B0GV90 55 aa11.31□□□□□ -0.6
RERE-212ENST00000476556 C5orf52A6NGY3 159 aa11.31□□□□□ -0.6
RERE-212ENST00000476556 DBX1A6NMT0 343 aa11.31□□□□□ -0.6
RERE-212ENST00000476556 HOXA5P20719 270 aa11.31□□□□□ -0.6
RERE-212ENST00000476556 WFDC1Q9HC57 220 aa11.31□□□□□ -0.6
RERE-212ENST00000476556 COL4A6Q14031 1691 aa11.31□□□□□ -0.6
RERE-212ENST00000476556 A0A1W2PQM1 296 aa11.31□□□□□ -0.6
RERE-212ENST00000476556 SHISA7A6NL88 538 aa11.31□□□□□ -0.6
RERE-212ENST00000476556 AESQ08117 197 aa11.31□□□□□ -0.6
RERE-212ENST00000476556 P2RX4Q99571 388 aa11.31□□□□□ -0.6
RERE-212ENST00000476556 DYNLRB1Q9NP97 96 aa11.31□□□□□ -0.6
RERE-212ENST00000476556 OR1A1Q9P1Q5 309 aa11.31□□□□□ -0.6
RERE-212ENST00000476556 ZDBF2Q9HCK1 2354 aa11.31□□□□□ -0.6
RERE-212ENST00000476556 TCL1AP56279 114 aa11.31□□□□□ -0.6
RERE-212ENST00000476556 DMWDQ09019 674 aa11.31□□□□□ -0.6
RERE-212ENST00000476556 CSRP2Q16527 193 aa11.31□□□□□ -0.6
RERE-212ENST00000476556 LINC00596Q86U02 117 aa11.31□□□□□ -0.6
RERE-212ENST00000476556 FGFRL1Q8N441 504 aa11.31□□□□□ -0.6
RERE-212ENST00000476556 KLHDC1Q8N7A1 406 aa11.31□□□□□ -0.6
RERE-212ENST00000476556 LRRC29Q8WV35 223 aa11.31□□□□□ -0.6
RERE-212ENST00000476556 SMOC1Q9H4F8 434 aa11.31□□□□□ -0.6
RERE-212ENST00000476556 CHCHD2Q9Y6H1 151 aaPredicted RBP11.31□□□□□ -0.6
RERE-212ENST00000476556 PLXNA4Q9HCM2 1894 aa11.31□□□□□ -0.6
RERE-212ENST00000476556 HOXB1P14653 301 aaPredicted RBP11.3□□□□□ -0.6
RERE-212ENST00000476556 ZNF25P17030 456 aaPredicted RBP11.3□□□□□ -0.6
RERE-212ENST00000476556 CCL20P78556 96 aa11.3□□□□□ -0.6
RERE-212ENST00000476556 ACSM6Q6P461 480 aa11.3□□□□□ -0.6
RERE-212ENST00000476556 LYG1Q8N1E2 194 aa11.3□□□□□ -0.6
RERE-212ENST00000476556 ZPBPQ9BS86 351 aa11.3□□□□□ -0.6
RERE-212ENST00000476556 PLXNA2O75051 1894 aa11.3□□□□□ -0.6
RERE-212ENST00000476556 OOEPA6NGQ2 149 aa11.3□□□□□ -0.6
RERE-212ENST00000476556 CYC1P08574 325 aa11.3□□□□□ -0.6
RERE-212ENST00000476556 CCL1P22362 96 aa11.3□□□□□ -0.6
RERE-212ENST00000476556 ERHP84090 104 aaKnown RBP11.3□□□□□ -0.6
RERE-212ENST00000476556 TPRX1Q8N7U7 411 aa11.3□□□□□ -0.6
RERE-212ENST00000476556 ZNF441Q8N8Z8 693 aa11.3□□□□□ -0.6
RERE-212ENST00000476556 BARX1Q9HBU1 254 aaPredicted RBP11.3□□□□□ -0.6
RERE-212ENST00000476556 DLL3Q9NYJ7 618 aa11.3□□□□□ -0.6
RERE-212ENST00000476556 PHF3Q92576 2039 aaKnown RBP11.3□□□□□ -0.6
RERE-212ENST00000476556 HELZP42694 1942 aaKnown RBP11.3□□□□□ -0.6
RERE-212ENST00000476556 EFNA2O43921 213 aa11.3□□□□□ -0.6
RERE-212ENST00000476556 PDE6DO43924 150 aa11.3□□□□□ -0.6
RERE-212ENST00000476556 TNFSF15O95150 251 aa11.3□□□□□ -0.6
RERE-212ENST00000476556 PCOLCEQ15113 449 aa11.3□□□□□ -0.6
RERE-212ENST00000476556 RPEL1Q2QD12 228 aa11.3□□□□□ -0.6
RERE-212ENST00000476556 POM121L2Q96KW2 1035 aa11.3□□□□□ -0.6
RERE-212ENST00000476556 NOL4LQ96MY1 436 aaPredicted RBP11.3□□□□□ -0.6
RERE-212ENST00000476556 OR2J1Q9GZK6 312 aa11.3□□□□□ -0.6
RERE-212ENST00000476556 PAM16Q9Y3D7 125 aa11.3□□□□□ -0.6
RERE-212ENST00000476556 NKX6-3A6NJ46 265 aa11.3□□□□□ -0.6
RERE-212ENST00000476556 ZNF729A6NN14 1252 aaPredicted RBP11.3□□□□□ -0.6
RERE-212ENST00000476556 M0R1B8 84 aa11.3□□□□□ -0.6
RERE-212ENST00000476556 NDUFB4O95168 129 aa11.3□□□□□ -0.6
RERE-212ENST00000476556 SUB1P53999 127 aaKnown RBP eCLIP11.3□□□□□ -0.6
RERE-212ENST00000476556 QRFPP83859 136 aa11.3□□□□□ -0.6
RERE-212ENST00000476556 RNF151Q2KHN1 245 aa11.3□□□□□ -0.6
RERE-212ENST00000476556 RCC1LQ96I51 464 aaKnown RBP11.3□□□□□ -0.6
RERE-212ENST00000476556 WFIKKN1Q96NZ8 548 aa11.3□□□□□ -0.6
RERE-212ENST00000476556 CT45A6P0DMU7 189 aa11.29□□□□□ -0.6
RERE-212ENST00000476556 CT45A5P0DMU8 189 aa11.29□□□□□ -0.6
RERE-212ENST00000476556 CT45A7P0DMV0 189 aa11.29□□□□□ -0.6
RERE-212ENST00000476556 MPLP40238 635 aa11.29□□□□□ -0.6
RERE-212ENST00000476556 GNG10P50151 68 aa11.29□□□□□ -0.6
RERE-212ENST00000476556 CT45A1Q5HYN5 189 aa11.29□□□□□ -0.6
RERE-212ENST00000476556 RIPPLY2Q5TAB7 128 aa11.29□□□□□ -0.6
RERE-212ENST00000476556 SLC23A3Q6PIS1 610 aa11.29□□□□□ -0.6
RERE-212ENST00000476556 NFAM1Q8NET5 270 aaPredicted RBP11.29□□□□□ -0.6
RERE-212ENST00000476556 CT45A3Q8NHU0 189 aa11.29□□□□□ -0.6
RERE-212ENST00000476556 TBX15Q96SF7 602 aa11.29□□□□□ -0.6
RERE-212ENST00000476556 PROCRQ9UNN8 238 aa11.29□□□□□ -0.6
RERE-212ENST00000476556 PATE3B3GLJ2 98 aa11.29□□□□□ -0.6
RERE-212ENST00000476556 ST8SIA5O15466 376 aa11.29□□□□□ -0.6
RERE-212ENST00000476556 SPRY3O43610 288 aa11.29□□□□□ -0.6
RERE-212ENST00000476556 OR10J1P30954 320 aa11.29□□□□□ -0.6
RERE-212ENST00000476556 OR4P4Q8NGL7 312 aa11.29□□□□□ -0.6
RERE-212ENST00000476556 SLC45A2Q9UMX9 530 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms