RNA–Protein interactions for RNA: ENST00000474323.5

SAMM50-203, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 2,368 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-203ENST00000474323 EFNA3P52797 238 aa12.43□□□□□ -0.42
SAMM50-203ENST00000474323 CNN3Q15417 329 aaKnown RBP12.43□□□□□ -0.42
SAMM50-203ENST00000474323 RSPO1Q2MKA7 263 aaPredicted RBP12.43□□□□□ -0.42
SAMM50-203ENST00000474323 Q6ZPA2 131 aa12.43□□□□□ -0.42
SAMM50-203ENST00000474323 ZNF295-AS1Q8N0V1 137 aa12.43□□□□□ -0.42
SAMM50-203ENST00000474323 GAPTQ8N292 157 aa12.43□□□□□ -0.42
SAMM50-203ENST00000474323 OXGR1Q96P68 337 aa12.43□□□□□ -0.42
SAMM50-203ENST00000474323 OR6C1Q96RD1 312 aa12.43□□□□□ -0.42
SAMM50-203ENST00000474323 PARD6GQ9BYG4 376 aaPredicted RBP12.43□□□□□ -0.42
SAMM50-203ENST00000474323 MSL2Q9HCI7 577 aa12.43□□□□□ -0.42
SAMM50-203ENST00000474323 ST3GAL6Q9Y274 331 aa12.43□□□□□ -0.42
SAMM50-203ENST00000474323 KIAA2026Q5HYC2 2103 aa12.43□□□□□ -0.42
SAMM50-203ENST00000474323 NCOA6Q14686 2063 aaPredicted RBP12.42□□□□□ -0.42
SAMM50-203ENST00000474323 IGKV1-27A0A075B6S5 117 aa12.42□□□□□ -0.42
SAMM50-203ENST00000474323 IGHV5-10-1A0A0J9YXX1 117 aa12.42□□□□□ -0.42
SAMM50-203ENST00000474323 A0A1B0GX78 115 aa12.42□□□□□ -0.42
SAMM50-203ENST00000474323 TLX3O43711 291 aaPredicted RBP12.42□□□□□ -0.42
SAMM50-203ENST00000474323 CER1O95813 267 aa12.42□□□□□ -0.42
SAMM50-203ENST00000474323 GYPAP02724 150 aa12.42□□□□□ -0.42
SAMM50-203ENST00000474323 PF4V1P10720 104 aa12.42□□□□□ -0.42
SAMM50-203ENST00000474323 MSR1P21757 451 aa12.42□□□□□ -0.42
SAMM50-203ENST00000474323 FOXL2P58012 376 aa12.42□□□□□ -0.42
SAMM50-203ENST00000474323 TM4SF20Q53R12 229 aa12.42□□□□□ -0.42
SAMM50-203ENST00000474323 TPTE2P1Q5T6R2 138 aa12.42□□□□□ -0.42
SAMM50-203ENST00000474323 WDYHV1Q96HA8 205 aa12.42□□□□□ -0.42
SAMM50-203ENST00000474323 DNAJC4Q9NNZ3 241 aa12.42□□□□□ -0.42
SAMM50-203ENST00000474323 AURKAIP1Q9NWT8 199 aaPredicted RBP12.42□□□□□ -0.42
SAMM50-203ENST00000474323 YLPM1P49750 1951 aaKnown RBP12.42□□□□□ -0.42
SAMM50-203ENST00000474323 H0Y980 276 aa12.42□□□□□ -0.42
SAMM50-203ENST00000474323 M0R135 149 aa12.42□□□□□ -0.42
SAMM50-203ENST00000474323 NUPR1O60356 82 aa12.42□□□□□ -0.42
SAMM50-203ENST00000474323 IL3RAP26951 378 aa12.42□□□□□ -0.42
SAMM50-203ENST00000474323 RPS18P62269 152 aaKnown RBP12.42□□□□□ -0.42
SAMM50-203ENST00000474323 HBG1P69891 147 aa12.42□□□□□ -0.42
SAMM50-203ENST00000474323 HBG2P69892 147 aa12.42□□□□□ -0.42
SAMM50-203ENST00000474323 TRA2AQ13595 282 aaKnown RBP eCLIP12.42□□□□□ -0.42
SAMM50-203ENST00000474323 CST9LP1Q5W188 147 aa12.42□□□□□ -0.42
SAMM50-203ENST00000474323 Q6ZS49 121 aa12.42□□□□□ -0.42
SAMM50-203ENST00000474323 SHISA6Q6ZSJ9 500 aa12.42□□□□□ -0.42
SAMM50-203ENST00000474323 BORCS8Q96FH0 119 aa12.42□□□□□ -0.42
SAMM50-203ENST00000474323 ZNF799Q96GE5 643 aa12.42□□□□□ -0.42
SAMM50-203ENST00000474323 CCDC74BQ96LY2 380 aa12.42□□□□□ -0.42
SAMM50-203ENST00000474323 GAL3ST2Q9H3Q3 398 aa12.42□□□□□ -0.42
SAMM50-203ENST00000474323 IL36GQ9NZH8 169 aa12.42□□□□□ -0.42
SAMM50-203ENST00000474323 KIAA1324LA8MWY0 1029 aaPredicted RBP12.41□□□□□ -0.42
SAMM50-203ENST00000474323 SHISA8B8ZZ34 492 aa12.41□□□□□ -0.42
SAMM50-203ENST00000474323 TNFSF12O43508 249 aa12.41□□□□□ -0.42
SAMM50-203ENST00000474323 CIDEAO60543 219 aa12.41□□□□□ -0.42
SAMM50-203ENST00000474323 TIAF1O95411 115 aa12.41□□□□□ -0.42
SAMM50-203ENST00000474323 SP9P0CG40 484 aa12.41□□□□□ -0.42
SAMM50-203ENST00000474323 CD46P15529 392 aa12.41□□□□□ -0.42
SAMM50-203ENST00000474323 GCH1P30793 250 aa12.41□□□□□ -0.42
SAMM50-203ENST00000474323 RAB7AP51149 207 aa12.41□□□□□ -0.42
SAMM50-203ENST00000474323 BATFQ16520 125 aa12.41□□□□□ -0.42
SAMM50-203ENST00000474323 SLC23A3Q6PIS1 610 aa12.41□□□□□ -0.42
SAMM50-203ENST00000474323 Q8NFD4 153 aa12.41□□□□□ -0.42
SAMM50-203ENST00000474323 CMTM2Q8TAZ6 248 aa12.41□□□□□ -0.42
SAMM50-203ENST00000474323 ZNF442Q9H7R0 627 aa12.41□□□□□ -0.42
SAMM50-203ENST00000474323 MANBALQ9NQG1 85 aa12.41□□□□□ -0.42
SAMM50-203ENST00000474323 CD99P14209 185 aa12.41□□□□□ -0.42
SAMM50-203ENST00000474323 TPPP2P59282 170 aa12.41□□□□□ -0.42
SAMM50-203ENST00000474323 TDRG1Q3Y452 100 aa12.41□□□□□ -0.42
SAMM50-203ENST00000474323 SLC25A53Q5H9E4 307 aa12.41□□□□□ -0.42
SAMM50-203ENST00000474323 C11orf42Q8N5U0 333 aa12.41□□□□□ -0.42
SAMM50-203ENST00000474323 VAMP8Q9BV40 100 aa12.41□□□□□ -0.42
SAMM50-203ENST00000474323 WDR61Q9GZS3 305 aaKnown RBP12.41□□□□□ -0.42
SAMM50-203ENST00000474323 CACNA1HO95180 2353 aa12.4□□□□□ -0.42
SAMM50-203ENST00000474323 IGKV1-12A0A0C4DH73 117 aa12.4□□□□□ -0.42
SAMM50-203ENST00000474323 A0A0U1RQK1 487 aa12.4□□□□□ -0.42
SAMM50-203ENST00000474323 ZNF320A2RRD8 509 aa12.4□□□□□ -0.42
SAMM50-203ENST00000474323 ITGB1BP1O14713 200 aa12.4□□□□□ -0.42
SAMM50-203ENST00000474323 IGKV1D-12P01611 117 aa12.4□□□□□ -0.42
SAMM50-203ENST00000474323 SOX8P57073 446 aa12.4□□□□□ -0.42
SAMM50-203ENST00000474323 FBXW4P57775 412 aa12.4□□□□□ -0.42
SAMM50-203ENST00000474323 RBX1P62877 108 aa12.4□□□□□ -0.42
SAMM50-203ENST00000474323 SRSF7Q16629 238 aaKnown RBP eCLIP12.4□□□□□ -0.42
SAMM50-203ENST00000474323 TMEM144Q7Z5S9 345 aa12.4□□□□□ -0.42
SAMM50-203ENST00000474323 RABEPKQ7Z6M1 372 aa12.4□□□□□ -0.42
SAMM50-203ENST00000474323 RPP25LQ8N5L8 163 aaKnown RBP12.4□□□□□ -0.42
SAMM50-203ENST00000474323 ARRDC1-AS1Q9H2J1 176 aa12.4□□□□□ -0.42
SAMM50-203ENST00000474323 OR51B6Q9H340 312 aa12.4□□□□□ -0.42
SAMM50-203ENST00000474323 SLC22A20A6NK97 555 aa12.4□□□□□ -0.43
SAMM50-203ENST00000474323 FOXL1Q12952 345 aa12.4□□□□□ -0.43
SAMM50-203ENST00000474323 FAM78BQ5VT40 261 aa12.4□□□□□ -0.43
SAMM50-203ENST00000474323 Q6ZWC4 215 aa12.4□□□□□ -0.43
SAMM50-203ENST00000474323 FAM216AQ8WUB2 273 aa12.4□□□□□ -0.43
SAMM50-203ENST00000474323 C22orf15Q8WYQ4 148 aa12.4□□□□□ -0.43
SAMM50-203ENST00000474323 SPTSSAQ969W0 71 aa12.4□□□□□ -0.43
SAMM50-203ENST00000474323 GPR146Q96CH1 333 aa12.4□□□□□ -0.43
SAMM50-203ENST00000474323 SLC35E1Q96K37 410 aa12.4□□□□□ -0.43
SAMM50-203ENST00000474323 TMEM9BQ9NQ34 198 aa12.4□□□□□ -0.43
SAMM50-203ENST00000474323 PAM16Q9Y3D7 125 aa12.4□□□□□ -0.43
SAMM50-203ENST00000474323 CHD3Q12873 2000 aaKnown RBP12.39□□□□□ -0.43
SAMM50-203ENST00000474323 RTTNQ86VV8 2226 aa12.39□□□□□ -0.43
SAMM50-203ENST00000474323 LOC102725191A0A1B0GVB3 256 aa12.39□□□□□ -0.43
SAMM50-203ENST00000474323 GDF9O60383 454 aa12.39□□□□□ -0.43
SAMM50-203ENST00000474323 ESDP10768 282 aa12.39□□□□□ -0.43
SAMM50-203ENST00000474323 CHRNB4P30926 498 aa12.39□□□□□ -0.43
SAMM50-203ENST00000474323 PPP1CBP62140 327 aa12.39□□□□□ -0.43
SAMM50-203ENST00000474323 ARL16Q0P5N6 197 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms