RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 SFXN4Q6P4A7 337 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 HRCT1Q6UXD1 115 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 CLEC14AQ86T13 490 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 TBC1D26Q86UD7 250 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 TTC9CQ8N5M4 171 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 KLHDC1Q8N7A1 406 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 COX18Q8N8Q8 333 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 OR51G1Q8NGK1 321 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 OR2T29Q8NH02 315 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 RXFP2Q8WXD0 754 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 CLDN23Q96B33 292 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 C20orf173Q96LM9 149 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 DEFB118Q96PH6 123 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 SLC25A39Q9BZJ4 359 aaPredicted RBP4.22□□□□□ -1.73
EPHA3-202ENST00000452448 OR2H1Q9GZK4 316 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 PELI2Q9HAT8 420 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 PLAC1Q9HBJ0 212 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 CDH20Q9HBT6 801 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 AIG1Q9NVV5 245 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 RARRES3Q9UL19 164 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 MCTS1Q9ULC4 181 aaKnown RBP4.22□□□□□ -1.73
EPHA3-202ENST00000452448 KCNS2Q9ULS6 477 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 ARID2Q68CP9 1835 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 PAPPA2Q9BXP8 1791 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 A0A1B0GX51 115 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 TCRBV5S2A0A599 114 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 OR4C45A6NMZ5 311 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 ZNF727A8MUV8 499 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 MS4A18H0YCH9 400 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 K7EP34 96 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 PTGESO14684 152 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 CREBL2O60519 120 aaPredicted RBP4.22□□□□□ -1.73
EPHA3-202ENST00000452448 FCGR3AP08637 254 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 VPREB1P12018 145 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 HTR1DP28221 377 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 TNFSF9P41273 254 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 CRYBB2P43320 205 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 OR1E2P47887 323 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 MEOX1P50221 254 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 PCBP3P57721 371 aaKnown RBP4.22□□□□□ -1.73
EPHA3-202ENST00000452448 EWSR1Q01844 656 aaKnown RBP eCLIP4.22□□□□□ -1.73
EPHA3-202ENST00000452448 COL10A1Q03692 680 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 HSPB3Q12988 150 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 EIF3IQ13347 325 aaKnown RBP4.22□□□□□ -1.73
EPHA3-202ENST00000452448 C1orf61Q13536 156 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 TREML2Q5T2D2 321 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 OTPQ5XKR4 325 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 ZNF534Q76KX8 674 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 HAPLN4Q86UW8 402 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 ABHD12Q8N2K0 398 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 RBMXL3Q8N7X1 1067 aaKnown RBP4.22□□□□□ -1.73
EPHA3-202ENST00000452448 ZDHHC22Q8N966 263 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 OR5A1Q8NGJ0 315 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 Q8TCH9 128 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 OR4K3Q96R72 315 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 GABRG3Q99928 467 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 TM2D2Q9BX73 214 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 IKZF5Q9H5V7 419 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 ZNF703Q9H7S9 590 aaPredicted RBP4.22□□□□□ -1.73
EPHA3-202ENST00000452448 TMEM106BQ9NUM4 274 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 ZNF581Q9P0T4 197 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 NTNG1Q9Y2I2 539 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 PARP14Q460N5 1801 aa4.22□□□□□ -1.73
EPHA3-202ENST00000452448 ATG2AQ2TAZ0 1938 aa4.21□□□□□ -1.73
EPHA3-202ENST00000452448 DUXBA0A1W2PPF3 345 aa4.21□□□□□ -1.74
EPHA3-202ENST00000452448 ZNF860A6NHJ4 632 aa4.21□□□□□ -1.74
EPHA3-202ENST00000452448 EIF4EBP3O60516 100 aaPredicted RBP4.21□□□□□ -1.74
EPHA3-202ENST00000452448 ATP5LO75964 103 aa4.21□□□□□ -1.74
EPHA3-202ENST00000452448 C1QL1O75973 258 aa4.21□□□□□ -1.74
EPHA3-202ENST00000452448 KBTBD11O94819 623 aa4.21□□□□□ -1.74
EPHA3-202ENST00000452448 DIRAS1O95057 198 aa4.21□□□□□ -1.74
EPHA3-202ENST00000452448 CYB5AP00167 134 aa4.21□□□□□ -1.74
EPHA3-202ENST00000452448 PTHP01270 115 aa4.21□□□□□ -1.74
EPHA3-202ENST00000452448 H1F0P07305 194 aaKnown RBP4.21□□□□□ -1.74
EPHA3-202ENST00000452448 CELA2AP08217 269 aa4.21□□□□□ -1.74
EPHA3-202ENST00000452448 SMIM10L2AP0DMW4 78 aa4.21□□□□□ -1.74
EPHA3-202ENST00000452448 SMIM10L2BP0DMW5 78 aa4.21□□□□□ -1.74
EPHA3-202ENST00000452448 FSTP19883 344 aa4.21□□□□□ -1.74
EPHA3-202ENST00000452448 NMBRP28336 390 aa4.21□□□□□ -1.74
EPHA3-202ENST00000452448 CLDN2P57739 230 aa4.21□□□□□ -1.74
EPHA3-202ENST00000452448 CDK3Q00526 305 aa4.21□□□□□ -1.74
EPHA3-202ENST00000452448 SP4Q02446 784 aa4.21□□□□□ -1.74
EPHA3-202ENST00000452448 ZNF92Q03936 586 aa4.21□□□□□ -1.74
EPHA3-202ENST00000452448 ATP5G2Q06055 141 aa4.21□□□□□ -1.74
EPHA3-202ENST00000452448 FAM27E3Q08E93 113 aa4.21□□□□□ -1.74
EPHA3-202ENST00000452448 LAMTOR4Q0VGL1 99 aa4.21□□□□□ -1.74
EPHA3-202ENST00000452448 ZNF260Q3ZCT1 412 aa4.21□□□□□ -1.74
EPHA3-202ENST00000452448 ANKRD16Q6P6B7 361 aa4.21□□□□□ -1.74
EPHA3-202ENST00000452448 C17orf64Q86WR6 236 aa4.21□□□□□ -1.74
EPHA3-202ENST00000452448 MARCH9Q86YJ5 346 aa4.21□□□□□ -1.74
EPHA3-202ENST00000452448 TMEFF1Q8IYR6 380 aa4.21□□□□□ -1.74
EPHA3-202ENST00000452448 TMEM151AQ8N4L1 468 aa4.21□□□□□ -1.74
EPHA3-202ENST00000452448 SYT8Q8NBV8 401 aa4.21□□□□□ -1.74
EPHA3-202ENST00000452448 OR1F12Q8NHA8 337 aa4.21□□□□□ -1.74
EPHA3-202ENST00000452448 DDB2Q92466 427 aa4.21□□□□□ -1.74
EPHA3-202ENST00000452448 GGTLC1Q9BX51 225 aa4.21□□□□□ -1.74
EPHA3-202ENST00000452448 SCN9AQ15858 1988 aa4.21□□□□□ -1.74
EPHA3-202ENST00000452448 IGKV6-21A0A0C4DH24 114 aa4.21□□□□□ -1.74
EPHA3-202ENST00000452448 FAM236DA0A1B0GTK5 79 aa4.21□□□□□ -1.74
EPHA3-202ENST00000452448 hADV38S2A0JD32 116 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms