RNA–Protein interactions for RNA: ENST00000449864.5

HDLBP-223, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-223	ENST00000449864	C12orf4	Q9NQ89	552 aa		12.54	□□□□□ -0.4
HDLBP-223	ENST00000449864	CMYA5	Q8N3K9	4069 aa		12.54	□□□□□ -0.4
HDLBP-223	ENST00000449864	TRAV1-2	A0A0B4J238	106 aa		12.53	□□□□□ -0.4
HDLBP-223	ENST00000449864	TRDV1	A0A1B0GX56	115 aa		12.53	□□□□□ -0.4
HDLBP-223	ENST00000449864	ADARB2-AS1	A8MUL3	147 aa		12.53	□□□□□ -0.4
HDLBP-223	ENST00000449864	DENR	O43583	198 aa	Known RBP	12.53	□□□□□ -0.4
HDLBP-223	ENST00000449864	YPEL1	O60688	119 aa		12.53	□□□□□ -0.4
HDLBP-223	ENST00000449864	CD83	Q01151	205 aa		12.53	□□□□□ -0.4
HDLBP-223	ENST00000449864	C22orf42	Q6IC83	251 aa		12.53	□□□□□ -0.4
HDLBP-223	ENST00000449864	CD200R1L	Q6Q8B3	271 aa		12.53	□□□□□ -0.4
HDLBP-223	ENST00000449864	SLC35E3	Q7Z769	313 aa		12.53	□□□□□ -0.4
HDLBP-223	ENST00000449864	FOXRED2	Q8IWF2	684 aa		12.53	□□□□□ -0.4
HDLBP-223	ENST00000449864	FAM89B	Q8N5H3	189 aa		12.53	□□□□□ -0.4
HDLBP-223	ENST00000449864	CHPT1	Q8WUD6	406 aa		12.53	□□□□□ -0.4
HDLBP-223	ENST00000449864	ARHGAP5-AS1	Q96IT6	56 aa		12.53	□□□□□ -0.4
HDLBP-223	ENST00000449864	YPEL2	Q96QA6	119 aa		12.53	□□□□□ -0.4
HDLBP-223	ENST00000449864	HDHD3	Q9BSH5	251 aa	Predicted RBP	12.53	□□□□□ -0.4
HDLBP-223	ENST00000449864	LIN7C	Q9NUP9	197 aa	Known RBP	12.53	□□□□□ -0.4
HDLBP-223	ENST00000449864	HSF4	Q9ULV5	492 aa		12.53	□□□□□ -0.4
HDLBP-223	ENST00000449864	TSSC4	Q9Y5U2	329 aa	Predicted RBP	12.53	□□□□□ -0.4
HDLBP-223	ENST00000449864	ZNF736	B4DX44	427 aa	Predicted RBP	12.52	□□□□□ -0.41
HDLBP-223	ENST00000449864	RAB3B	P20337	219 aa		12.52	□□□□□ -0.41
HDLBP-223	ENST00000449864	GAL	P22466	123 aa		12.52	□□□□□ -0.41
HDLBP-223	ENST00000449864	OR10A3	P58181	314 aa		12.52	□□□□□ -0.41
HDLBP-223	ENST00000449864	HLA-DRB3	P79483	266 aa		12.52	□□□□□ -0.41
HDLBP-223	ENST00000449864	MRPS15	P82914	257 aa	Known RBP	12.52	□□□□□ -0.41
HDLBP-223	ENST00000449864	LSAMP	Q13449	338 aa		12.52	□□□□□ -0.41
HDLBP-223	ENST00000449864	C2orf76	Q3KRA6	126 aa		12.52	□□□□□ -0.41
HDLBP-223	ENST00000449864	UBE2U	Q5VVX9	321 aa		12.52	□□□□□ -0.41
HDLBP-223	ENST00000449864	ZNF880	Q6PDB4	577 aa		12.52	□□□□□ -0.41
HDLBP-223	ENST00000449864	C10orf99	Q6UWK7	81 aa		12.52	□□□□□ -0.41
HDLBP-223	ENST00000449864	SPART	Q8N0X7	666 aa		12.52	□□□□□ -0.41
HDLBP-223	ENST00000449864		Q8N6K4	173 aa		12.52	□□□□□ -0.41
HDLBP-223	ENST00000449864	OR8H1	Q8NGG4	311 aa		12.52	□□□□□ -0.41
HDLBP-223	ENST00000449864	RASL11B	Q9BPW5	248 aa		12.52	□□□□□ -0.41
HDLBP-223	ENST00000449864	YTHDF1	Q9BYJ9	559 aa	Known RBP	12.52	□□□□□ -0.41
HDLBP-223	ENST00000449864	RAB22A	Q9UL26	194 aa		12.52	□□□□□ -0.41
HDLBP-223	ENST00000449864	MGAT4A	Q9UM21	535 aa		12.52	□□□□□ -0.41
HDLBP-223	ENST00000449864	SAA2-SAA4	A0A096LPE2	208 aa		12.51	□□□□□ -0.41
HDLBP-223	ENST00000449864	TRBV6-6	A0A0A6YYG2	114 aa		12.51	□□□□□ -0.41
HDLBP-223	ENST00000449864	TMEM272	A0A1B0GTI8	110 aa		12.51	□□□□□ -0.41
HDLBP-223	ENST00000449864	IFITM5	A6NNB3	132 aa		12.51	□□□□□ -0.41
HDLBP-223	ENST00000449864	FOXI3	A8MTJ6	420 aa	Predicted RBP	12.51	□□□□□ -0.41
HDLBP-223	ENST00000449864	IGHG2	P01859	326 aa		12.51	□□□□□ -0.41
HDLBP-223	ENST00000449864	SAA2	P0DJI9	122 aa	Predicted RBP	12.51	□□□□□ -0.41
HDLBP-223	ENST00000449864	SLC35B1	P78383	322 aa		12.51	□□□□□ -0.41
HDLBP-223	ENST00000449864	PDLIM3	Q53GG5	364 aa	Predicted RBP	12.51	□□□□□ -0.41
HDLBP-223	ENST00000449864	TCTEX1D4	Q5JR98	221 aa		12.51	□□□□□ -0.41
HDLBP-223	ENST00000449864	LY6G6F	Q5SQ64	297 aa		12.51	□□□□□ -0.41
HDLBP-223	ENST00000449864		Q6ZPA2	131 aa		12.51	□□□□□ -0.41
HDLBP-223	ENST00000449864	NOL4L	Q96MY1	436 aa	Predicted RBP	12.51	□□□□□ -0.41
HDLBP-223	ENST00000449864	CMSS1	Q9BQ75	279 aa	Known RBP	12.51	□□□□□ -0.41
HDLBP-223	ENST00000449864	PECR	Q9BY49	303 aa		12.51	□□□□□ -0.41
HDLBP-223	ENST00000449864	MRPL20	Q9BYC9	149 aa	Known RBP	12.51	□□□□□ -0.41
HDLBP-223	ENST00000449864	SLC23A1	Q9UHI7	598 aa		12.51	□□□□□ -0.41
HDLBP-223	ENST00000449864	SHISA3	A0PJX4	238 aa		12.5	□□□□□ -0.41
HDLBP-223	ENST00000449864		G3V4G9	280 aa		12.5	□□□□□ -0.41
HDLBP-223	ENST00000449864	LDLRAD4	O15165	306 aa		12.5	□□□□□ -0.41
HDLBP-223	ENST00000449864	ST8SIA5	O15466	376 aa		12.5	□□□□□ -0.41
HDLBP-223	ENST00000449864	HSPA12A	O43301	675 aa		12.5	□□□□□ -0.41
HDLBP-223	ENST00000449864	PF4	P02776	101 aa		12.5	□□□□□ -0.41
HDLBP-223	ENST00000449864	GADD45A	P24522	165 aa		12.5	□□□□□ -0.41
HDLBP-223	ENST00000449864	GPR12	P47775	334 aa		12.5	□□□□□ -0.41
HDLBP-223	ENST00000449864	OR3A3	P47888	321 aa		12.5	□□□□□ -0.41
HDLBP-223	ENST00000449864	ZNF773	Q6PK81	442 aa		12.5	□□□□□ -0.41
HDLBP-223	ENST00000449864	ZNF329	Q86UD4	541 aa		12.5	□□□□□ -0.41
HDLBP-223	ENST00000449864	ODF3L1	Q8IXM7	274 aa		12.5	□□□□□ -0.41
HDLBP-223	ENST00000449864		Q8N9W7	124 aa		12.5	□□□□□ -0.41
HDLBP-223	ENST00000449864	RAB3C	Q96E17	227 aa		12.5	□□□□□ -0.41
HDLBP-223	ENST00000449864	S1PR3	Q99500	378 aa		12.5	□□□□□ -0.41
HDLBP-223	ENST00000449864	ABCG5	Q9H222	651 aa		12.5	□□□□□ -0.41
HDLBP-223	ENST00000449864	LINC00527	Q9UJ94	153 aa		12.5	□□□□□ -0.41
HDLBP-223	ENST00000449864	SMIM30	A4D0T7	59 aa		12.49	□□□□□ -0.41
HDLBP-223	ENST00000449864	AP4M1	O00189	453 aa		12.49	□□□□□ -0.41
HDLBP-223	ENST00000449864	CD3G	P09693	182 aa		12.49	□□□□□ -0.41
HDLBP-223	ENST00000449864	CD33	P20138	364 aa		12.49	□□□□□ -0.41
HDLBP-223	ENST00000449864	ZBTB25	P24278	435 aa		12.49	□□□□□ -0.41
HDLBP-223	ENST00000449864	TMEM50B	P56557	158 aa		12.49	□□□□□ -0.41
HDLBP-223	ENST00000449864	PLA2G7	Q13093	441 aa		12.49	□□□□□ -0.41
HDLBP-223	ENST00000449864	MMD	Q15546	238 aa		12.49	□□□□□ -0.41
HDLBP-223	ENST00000449864	PLAC9	Q5JTB6	97 aa		12.49	□□□□□ -0.41
HDLBP-223	ENST00000449864	FAM71F2	Q6NXP2	309 aa		12.49	□□□□□ -0.41
HDLBP-223	ENST00000449864	ZNF833P	Q6ZTB9	187 aa		12.49	□□□□□ -0.41
HDLBP-223	ENST00000449864	STPG2	Q8N412	459 aa		12.49	□□□□□ -0.41
HDLBP-223	ENST00000449864	RBMXL1	Q96E39	390 aa	Known RBP	12.49	□□□□□ -0.41
HDLBP-223	ENST00000449864	NABP2	Q9BQ15	211 aa		12.49	□□□□□ -0.41
HDLBP-223	ENST00000449864	IFI27L2	Q9H2X8	130 aa		12.49	□□□□□ -0.41
HDLBP-223	ENST00000449864		Q9N2K0	584 aa		12.49	□□□□□ -0.41
HDLBP-223	ENST00000449864	TXNL4B	Q9NX01	149 aa	Known RBP	12.49	□□□□□ -0.41
HDLBP-223	ENST00000449864	PIPOX	Q9P0Z9	390 aa		12.49	□□□□□ -0.41
HDLBP-223	ENST00000449864	OR1A1	Q9P1Q5	309 aa		12.49	□□□□□ -0.41
HDLBP-223	ENST00000449864	STUB1	Q9UNE7	303 aa		12.49	□□□□□ -0.41
HDLBP-223	ENST00000449864	RRP15	Q9Y3B9	282 aa	Known RBP	12.49	□□□□□ -0.41
HDLBP-223	ENST00000449864		A0A075B6Q4	140 aa		12.48	□□□□□ -0.41
HDLBP-223	ENST00000449864	RAB29	O14966	203 aa		12.48	□□□□□ -0.41
HDLBP-223	ENST00000449864	RRP9	O43818	475 aa	Known RBP	12.48	□□□□□ -0.41
HDLBP-223	ENST00000449864	SOX6	P35712	828 aa		12.48	□□□□□ -0.41
HDLBP-223	ENST00000449864	FAM71E2	Q8N5Q1	922 aa		12.48	□□□□□ -0.41
HDLBP-223	ENST00000449864	OR10R2	Q8NGX6	335 aa		12.48	□□□□□ -0.41
HDLBP-223	ENST00000449864	EDARADD	Q8WWZ3	215 aa		12.48	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 59 ms