RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 SLIRPQ9GZT3 109 aaKnown RBP15.51■□□□□ 0.07
HOXA9-202ENST00000396345 OR1A1Q9P1Q5 309 aa15.51■□□□□ 0.07
HOXA9-202ENST00000396345 MRPS7Q9Y2R9 242 aaKnown RBP15.51■□□□□ 0.07
HOXA9-202ENST00000396345 IGKV1D-8A0A087WSZ0 117 aa15.5■□□□□ 0.07
HOXA9-202ENST00000396345 IGKV1-6A0A0C4DH72 117 aa15.5■□□□□ 0.07
HOXA9-202ENST00000396345 VGLL3A8MV65 326 aa15.5■□□□□ 0.07
HOXA9-202ENST00000396345 OOSP1A8MZH6 123 aa15.5■□□□□ 0.07
HOXA9-202ENST00000396345 H3BUX3 64 aa15.5■□□□□ 0.07
HOXA9-202ENST00000396345 IL3RAP26951 378 aa15.5■□□□□ 0.07
HOXA9-202ENST00000396345 CEACAM6P40199 344 aa15.5■□□□□ 0.07
HOXA9-202ENST00000396345 HERPUD1Q15011 391 aa15.5■□□□□ 0.07
HOXA9-202ENST00000396345 OR2AK2Q8NG84 335 aa15.5■□□□□ 0.07
HOXA9-202ENST00000396345 OR5R1Q8NH85 324 aa15.5■□□□□ 0.07
HOXA9-202ENST00000396345 ZFAND2BQ8WV99 257 aa15.5■□□□□ 0.07
HOXA9-202ENST00000396345 RPEQ96AT9 228 aa15.5■□□□□ 0.07
HOXA9-202ENST00000396345 DCUN1D5Q9BTE7 237 aa15.5■□□□□ 0.07
HOXA9-202ENST00000396345 ABHD14AQ9BUJ0 271 aa15.5■□□□□ 0.07
HOXA9-202ENST00000396345 MIXL1Q9H2W2 232 aa15.5■□□□□ 0.07
HOXA9-202ENST00000396345 ABCB10Q9NRK6 738 aa15.5■□□□□ 0.07
HOXA9-202ENST00000396345 ADAM30Q9UKF2 790 aa15.5■□□□□ 0.07
HOXA9-202ENST00000396345 BET1O15155 118 aa15.49■□□□□ 0.07
HOXA9-202ENST00000396345 HLA-DQB1P01920 261 aa15.49■□□□□ 0.07
HOXA9-202ENST00000396345 RNASE1P07998 156 aaKnown RBP15.49■□□□□ 0.07
HOXA9-202ENST00000396345 PRSS3P35030 304 aa15.49■□□□□ 0.07
HOXA9-202ENST00000396345 CBX5P45973 191 aa15.49■□□□□ 0.07
HOXA9-202ENST00000396345 ARHGDIBP52566 201 aa15.49■□□□□ 0.07
HOXA9-202ENST00000396345 IGSF11Q5DX21 431 aa15.49■□□□□ 0.07
HOXA9-202ENST00000396345 CCDC144NLQ6NUI1 221 aa15.49■□□□□ 0.07
HOXA9-202ENST00000396345 LAX1Q8IWV1 398 aa15.49■□□□□ 0.07
HOXA9-202ENST00000396345 MCFD2Q8NI22 146 aa15.49■□□□□ 0.07
HOXA9-202ENST00000396345 TOMM40LQ969M1 308 aa15.49■□□□□ 0.07
HOXA9-202ENST00000396345 DGCR14Q96DF8 476 aaKnown RBP15.49■□□□□ 0.07
HOXA9-202ENST00000396345 CABLES2Q9BTV7 478 aa15.49■□□□□ 0.07
HOXA9-202ENST00000396345 CHIAQ9BZP6 476 aa15.49■□□□□ 0.07
HOXA9-202ENST00000396345 C6orf62Q9GZU0 229 aaPredicted RBP15.49■□□□□ 0.07
HOXA9-202ENST00000396345 EXTL2Q9UBQ6 330 aa15.49■□□□□ 0.07
HOXA9-202ENST00000396345 MEIS3P1A6NDR6 274 aa15.48■□□□□ 0.07
HOXA9-202ENST00000396345 DIRAS3O95661 229 aa15.48■□□□□ 0.07
HOXA9-202ENST00000396345 RAB13P51153 203 aa15.48■□□□□ 0.07
HOXA9-202ENST00000396345 DYNLT3P51808 116 aa15.48■□□□□ 0.07
HOXA9-202ENST00000396345 C16orf87Q6PH81 154 aa15.48■□□□□ 0.07
HOXA9-202ENST00000396345 HOGA1Q86XE5 327 aa15.48■□□□□ 0.07
HOXA9-202ENST00000396345 SNX29P2Q8IUI4 249 aa15.48■□□□□ 0.07
HOXA9-202ENST00000396345 GVQW1Q8N7I0 195 aa15.48■□□□□ 0.07
HOXA9-202ENST00000396345 OR10J5Q8NHC4 309 aa15.48■□□□□ 0.07
HOXA9-202ENST00000396345 FAM216AQ8WUB2 273 aa15.48■□□□□ 0.07
HOXA9-202ENST00000396345 NXF2Q9GZY0 626 aaKnown RBP15.48■□□□□ 0.07
HOXA9-202ENST00000396345 TRBV6-7A0A0A0MS04 114 aa15.47■□□□□ 0.07
HOXA9-202ENST00000396345 ITGB1BP1O14713 200 aa15.47■□□□□ 0.07
HOXA9-202ENST00000396345 HSD17B6O14756 317 aa15.47■□□□□ 0.07
HOXA9-202ENST00000396345 BRS3P32247 399 aa15.47■□□□□ 0.07
HOXA9-202ENST00000396345 RAB7AP51149 207 aa15.47■□□□□ 0.07
HOXA9-202ENST00000396345 DIAPH2-AS1Q14236 149 aa15.47■□□□□ 0.07
HOXA9-202ENST00000396345 LY6EQ16553 131 aa15.47■□□□□ 0.07
HOXA9-202ENST00000396345 CNIH2Q6PI25 160 aa15.47■□□□□ 0.07
HOXA9-202ENST00000396345 LYG1Q8N1E2 194 aa15.47■□□□□ 0.07
HOXA9-202ENST00000396345 BEST4Q8NFU0 473 aa15.47■□□□□ 0.07
HOXA9-202ENST00000396345 PIFOQ8TCI5 191 aa15.47■□□□□ 0.07
HOXA9-202ENST00000396345 EDARADDQ8WWZ3 215 aa15.47■□□□□ 0.07
HOXA9-202ENST00000396345 GCDHQ92947 438 aaPredicted RBP15.47■□□□□ 0.07
HOXA9-202ENST00000396345 GINS4Q9BRT9 223 aa15.47■□□□□ 0.07
HOXA9-202ENST00000396345 TOLLIPQ9H0E2 274 aa15.47■□□□□ 0.07
HOXA9-202ENST00000396345 PARP12Q9H0J9 701 aaKnown RBP15.47■□□□□ 0.07
HOXA9-202ENST00000396345 IFT46Q9NQC8 304 aa15.47■□□□□ 0.07
HOXA9-202ENST00000396345 RDH8Q9NYR8 311 aa15.47■□□□□ 0.07
HOXA9-202ENST00000396345 ANXA10Q9UJ72 324 aa15.47■□□□□ 0.07
HOXA9-202ENST00000396345 VPREB3Q9UKI3 123 aa15.47■□□□□ 0.07
HOXA9-202ENST00000396345 ST8SIA5O15466 376 aa15.46■□□□□ 0.07
HOXA9-202ENST00000396345 GAPDHP04406 335 aaKnown RBP15.46■□□□□ 0.07
HOXA9-202ENST00000396345 CTXN2P0C2S0 81 aa15.46■□□□□ 0.07
HOXA9-202ENST00000396345 ZNF137PP52743 207 aa15.46■□□□□ 0.07
HOXA9-202ENST00000396345 ZNF816Q0VGE8 651 aaPredicted RBP15.46■□□□□ 0.07
HOXA9-202ENST00000396345 KRTAP24-1Q3LI83 254 aa15.46■□□□□ 0.07
HOXA9-202ENST00000396345 TMEM158Q8WZ71 300 aa15.46■□□□□ 0.07
HOXA9-202ENST00000396345 ST6GALNAC6Q969X2 333 aa15.46■□□□□ 0.07
HOXA9-202ENST00000396345 MDFIQ99750 246 aa15.46■□□□□ 0.07
HOXA9-202ENST00000396345 C11orf54Q9H0W9 315 aaPredicted RBP15.46■□□□□ 0.07
HOXA9-202ENST00000396345 FBN1P35555 2871 aaKnown RBP15.45■□□□□ 0.06
HOXA9-202ENST00000396345 TPPPO94811 219 aa15.45■□□□□ 0.06
HOXA9-202ENST00000396345 FCER2P06734 321 aa15.45■□□□□ 0.06
HOXA9-202ENST00000396345 LPLP06858 475 aa15.45■□□□□ 0.06
HOXA9-202ENST00000396345 REG1BP48304 166 aa15.45■□□□□ 0.06
HOXA9-202ENST00000396345 ARPC4P59998 168 aa15.45■□□□□ 0.06
HOXA9-202ENST00000396345 FOXB2Q5VYV0 432 aa15.45■□□□□ 0.06
HOXA9-202ENST00000396345 ODF3L1Q8IXM7 274 aa15.45■□□□□ 0.06
HOXA9-202ENST00000396345 OR8H3Q8N146 312 aa15.45■□□□□ 0.06
HOXA9-202ENST00000396345 DIRAS2Q96HU8 199 aa15.45■□□□□ 0.06
HOXA9-202ENST00000396345 IFI27L2Q9H2X8 130 aa15.45■□□□□ 0.06
HOXA9-202ENST00000396345 SCPEP1Q9HB40 452 aa15.45■□□□□ 0.06
HOXA9-202ENST00000396345 A0A1W2PPI3 338 aa15.44■□□□□ 0.06
HOXA9-202ENST00000396345 FAM181BA6NEQ2 426 aa15.44■□□□□ 0.06
HOXA9-202ENST00000396345 RNF212BA8MTL3 300 aa15.44■□□□□ 0.06
HOXA9-202ENST00000396345 TIMM23O14925 209 aa15.44■□□□□ 0.06
HOXA9-202ENST00000396345 GPR137BO60478 399 aa15.44■□□□□ 0.06
HOXA9-202ENST00000396345 MOB3BQ86TA1 216 aa15.44■□□□□ 0.06
HOXA9-202ENST00000396345 TGIF2LXQ8IUE1 241 aa15.44■□□□□ 0.06
HOXA9-202ENST00000396345 DRAM1Q8N682 238 aa15.44■□□□□ 0.06
HOXA9-202ENST00000396345 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.44■□□□□ 0.06
HOXA9-202ENST00000396345 GPX8Q8TED1 209 aa15.44■□□□□ 0.06
HOXA9-202ENST00000396345 C15orf40Q8WUR7 153 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms