RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 ZNF580Q9UK33 172 aa10.74□□□□□ -0.69
TNFRSF1A-202ENST00000366159 TPRKBQ9Y3C4 175 aa10.74□□□□□ -0.69
TNFRSF1A-202ENST00000366159 LRRC42Q9Y546 428 aa10.74□□□□□ -0.69
TNFRSF1A-202ENST00000366159 TRBV6-6A0A0A6YYG2 114 aa10.73□□□□□ -0.69
TNFRSF1A-202ENST00000366159 BPNT1O95861 308 aa10.73□□□□□ -0.69
TNFRSF1A-202ENST00000366159 IGF1P05019 195 aa10.73□□□□□ -0.69
TNFRSF1A-202ENST00000366159 CRHBPP24387 322 aa10.73□□□□□ -0.69
TNFRSF1A-202ENST00000366159 PPP1CCP36873 323 aaKnown RBP10.73□□□□□ -0.69
TNFRSF1A-202ENST00000366159 MYCNOSP40205 109 aa10.73□□□□□ -0.69
TNFRSF1A-202ENST00000366159 SLC35B1P78383 322 aa10.73□□□□□ -0.69
TNFRSF1A-202ENST00000366159 PNLIPRP3Q17RR3 467 aa10.73□□□□□ -0.69
TNFRSF1A-202ENST00000366159 KHDC1LQ5JSQ8 128 aa10.73□□□□□ -0.69
TNFRSF1A-202ENST00000366159 NKAPLQ5M9Q1 402 aa10.73□□□□□ -0.69
TNFRSF1A-202ENST00000366159 TEX38Q6PEX7 206 aa10.73□□□□□ -0.69
TNFRSF1A-202ENST00000366159 ZNF833PQ6ZTB9 187 aa10.73□□□□□ -0.69
TNFRSF1A-202ENST00000366159 OR6M1Q8NGM8 313 aa10.73□□□□□ -0.69
TNFRSF1A-202ENST00000366159 UFD1Q92890 307 aa10.73□□□□□ -0.69
TNFRSF1A-202ENST00000366159 GALMQ96C23 342 aa10.73□□□□□ -0.69
TNFRSF1A-202ENST00000366159 RITA1Q96K30 269 aa10.73□□□□□ -0.69
TNFRSF1A-202ENST00000366159 NEDD4LQ96PU5 975 aa10.73□□□□□ -0.69
TNFRSF1A-202ENST00000366159 ABHD14AQ9BUJ0 271 aa10.73□□□□□ -0.69
TNFRSF1A-202ENST00000366159 LPAR5Q9H1C0 372 aa10.73□□□□□ -0.69
TNFRSF1A-202ENST00000366159 K7EIL1 84 aa10.72□□□□□ -0.69
TNFRSF1A-202ENST00000366159 SLC17A2O00624 439 aa10.72□□□□□ -0.69
TNFRSF1A-202ENST00000366159 CPEP16870 476 aa10.72□□□□□ -0.69
TNFRSF1A-202ENST00000366159 RPS25P62851 125 aaKnown RBP10.72□□□□□ -0.69
TNFRSF1A-202ENST00000366159 MLLT11Q13015 90 aaPredicted RBP10.72□□□□□ -0.69
TNFRSF1A-202ENST00000366159 C8orf86Q6ZUL3 223 aa10.72□□□□□ -0.69
TNFRSF1A-202ENST00000366159 PRSS48Q7RTY5 328 aa10.72□□□□□ -0.69
TNFRSF1A-202ENST00000366159 SVOPQ8N4V2 548 aa10.72□□□□□ -0.69
TNFRSF1A-202ENST00000366159 OR51D1Q8NGF3 324 aa10.72□□□□□ -0.69
TNFRSF1A-202ENST00000366159 TMEM203Q969S6 136 aa10.72□□□□□ -0.69
TNFRSF1A-202ENST00000366159 RASL11BQ9BPW5 248 aa10.72□□□□□ -0.69
TNFRSF1A-202ENST00000366159 NABP2Q9BQ15 211 aa10.72□□□□□ -0.69
TNFRSF1A-202ENST00000366159 ZNF251Q9BRH9 671 aa10.72□□□□□ -0.69
TNFRSF1A-202ENST00000366159 IFI27L2Q9H2X8 130 aa10.72□□□□□ -0.69
TNFRSF1A-202ENST00000366159 SOCS1O15524 211 aa10.71□□□□□ -0.69
TNFRSF1A-202ENST00000366159 RGS10O43665 173 aa10.71□□□□□ -0.69
TNFRSF1A-202ENST00000366159 IGHG4P01861 327 aa10.71□□□□□ -0.69
TNFRSF1A-202ENST00000366159 RPLP1P05386 114 aaKnown RBP10.71□□□□□ -0.69
TNFRSF1A-202ENST00000366159 SOX6P35712 828 aa10.71□□□□□ -0.69
TNFRSF1A-202ENST00000366159 CDX1P47902 265 aaPredicted RBP10.71□□□□□ -0.69
TNFRSF1A-202ENST00000366159 TMEM50BP56557 158 aa10.71□□□□□ -0.69
TNFRSF1A-202ENST00000366159 FOXE3Q13461 319 aa10.71□□□□□ -0.69
TNFRSF1A-202ENST00000366159 TRAM1Q15629 374 aa10.71□□□□□ -0.69
TNFRSF1A-202ENST00000366159 LCE2DQ5TA82 110 aaPredicted RBP10.71□□□□□ -0.69
TNFRSF1A-202ENST00000366159 ZNF695Q8IW36 515 aa10.71□□□□□ -0.69
TNFRSF1A-202ENST00000366159 AGMATQ9BSE5 352 aa10.71□□□□□ -0.69
TNFRSF1A-202ENST00000366159 GON7Q9BXV9 100 aa10.71□□□□□ -0.69
TNFRSF1A-202ENST00000366159 MRPL20Q9BYC9 149 aaKnown RBP10.71□□□□□ -0.69
TNFRSF1A-202ENST00000366159 HSF4Q9ULV5 492 aa10.71□□□□□ -0.69
TNFRSF1A-202ENST00000366159 SAA2-SAA4A0A096LPE2 208 aa10.7□□□□□ -0.7
TNFRSF1A-202ENST00000366159 ITGB1BP1O14713 200 aa10.7□□□□□ -0.7
TNFRSF1A-202ENST00000366159 LDLRAD4O15165 306 aa10.7□□□□□ -0.7
TNFRSF1A-202ENST00000366159 RGS11O94810 467 aa10.7□□□□□ -0.7
TNFRSF1A-202ENST00000366159 ELANEP08246 267 aa10.7□□□□□ -0.7
TNFRSF1A-202ENST00000366159 SAA2P0DJI9 122 aaPredicted RBP10.7□□□□□ -0.7
TNFRSF1A-202ENST00000366159 PSMA1P25786 263 aaKnown RBP10.7□□□□□ -0.7
TNFRSF1A-202ENST00000366159 CNTFRP26992 372 aa10.7□□□□□ -0.7
TNFRSF1A-202ENST00000366159 PSMB8P28062 276 aa10.7□□□□□ -0.7
TNFRSF1A-202ENST00000366159 BLVRBP30043 206 aaPredicted RBP10.7□□□□□ -0.7
TNFRSF1A-202ENST00000366159 PPIFP30405 207 aaKnown RBP10.7□□□□□ -0.7
TNFRSF1A-202ENST00000366159 OR3A3P47888 321 aa10.7□□□□□ -0.7
TNFRSF1A-202ENST00000366159 ACTBP60709 375 aa10.7□□□□□ -0.7
TNFRSF1A-202ENST00000366159 FABP5Q01469 135 aa10.7□□□□□ -0.7
TNFRSF1A-202ENST00000366159 KIAA0141Q14154 515 aaPredicted RBP10.7□□□□□ -0.7
TNFRSF1A-202ENST00000366159 FAM71F2Q6NXP2 309 aa10.7□□□□□ -0.7
TNFRSF1A-202ENST00000366159 KLHL30-AS1Q8NEE0 82 aa10.7□□□□□ -0.7
TNFRSF1A-202ENST00000366159 NPBQ8NG41 125 aa10.7□□□□□ -0.7
TNFRSF1A-202ENST00000366159 MYOZ3Q8TDC0 251 aa10.7□□□□□ -0.7
TNFRSF1A-202ENST00000366159 RAX2Q96IS3 184 aa10.7□□□□□ -0.7
TNFRSF1A-202ENST00000366159 MGLLQ99685 303 aa10.7□□□□□ -0.7
TNFRSF1A-202ENST00000366159 CHCHD6Q9BRQ6 235 aa10.7□□□□□ -0.7
TNFRSF1A-202ENST00000366159 RIMS4Q9H426 269 aaPredicted RBP10.7□□□□□ -0.7
TNFRSF1A-202ENST00000366159 PLEKHJ1Q9NW61 149 aa10.7□□□□□ -0.7
TNFRSF1A-202ENST00000366159 AK3Q9UIJ7 227 aa10.7□□□□□ -0.7
TNFRSF1A-202ENST00000366159 AK6Q9Y3D8 172 aaKnown RBP10.7□□□□□ -0.7
TNFRSF1A-202ENST00000366159 WI2-2373I1.2A0A1W2PRP0 233 aa10.69□□□□□ -0.7
TNFRSF1A-202ENST00000366159 ARL6IP5O75915 188 aa10.69□□□□□ -0.7
TNFRSF1A-202ENST00000366159 NDUFA3O95167 84 aa10.69□□□□□ -0.7
TNFRSF1A-202ENST00000366159 HLA-DRB1P01911 266 aa10.69□□□□□ -0.7
TNFRSF1A-202ENST00000366159 HSMCR30P0CW71 290 aa10.69□□□□□ -0.7
TNFRSF1A-202ENST00000366159 ARSBP15848 533 aa10.69□□□□□ -0.7
TNFRSF1A-202ENST00000366159 MAP2K4P45985 399 aa10.69□□□□□ -0.7
TNFRSF1A-202ENST00000366159 KIR2DS1Q14954 304 aa10.69□□□□□ -0.7
TNFRSF1A-202ENST00000366159 P2RY14Q15391 338 aa10.69□□□□□ -0.7
TNFRSF1A-202ENST00000366159 LCNL1Q6ZST4 164 aa10.69□□□□□ -0.7
TNFRSF1A-202ENST00000366159 MOB1BQ7L9L4 216 aa10.69□□□□□ -0.7
TNFRSF1A-202ENST00000366159 OR2AK2Q8NG84 335 aa10.69□□□□□ -0.7
TNFRSF1A-202ENST00000366159 PARP12Q9H0J9 701 aaKnown RBP10.69□□□□□ -0.7
TNFRSF1A-202ENST00000366159 ZNF107Q9UII5 783 aaPredicted RBP10.69□□□□□ -0.7
TNFRSF1A-202ENST00000366159 IGHV7-81A0A0B4J1V7 117 aa10.68□□□□□ -0.7
TNFRSF1A-202ENST00000366159 CCL24O00175 119 aa10.68□□□□□ -0.7
TNFRSF1A-202ENST00000366159 RRP9O43818 475 aaKnown RBP10.68□□□□□ -0.7
TNFRSF1A-202ENST00000366159 PROP1O75360 226 aa10.68□□□□□ -0.7
TNFRSF1A-202ENST00000366159 IGLV1-40P01703 118 aa10.68□□□□□ -0.7
TNFRSF1A-202ENST00000366159 CT45A6P0DMU7 189 aa10.68□□□□□ -0.7
TNFRSF1A-202ENST00000366159 CT45A5P0DMU8 189 aa10.68□□□□□ -0.7
TNFRSF1A-202ENST00000366159 CT45A7P0DMV0 189 aa10.68□□□□□ -0.7
TNFRSF1A-202ENST00000366159 HOXD3P31249 432 aaPredicted RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms