RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 ACSM6Q6P461 480 aa12.5□□□□□ -0.41
COL6A2-201ENST00000300527 KCNIP4Q6PIL6 250 aa12.5□□□□□ -0.41
COL6A2-201ENST00000300527 MCEMP1Q8IX19 187 aa12.5□□□□□ -0.41
COL6A2-201ENST00000300527 CLDN23Q96B33 292 aa12.5□□□□□ -0.41
COL6A2-201ENST00000300527 FOXB1Q99853 325 aa12.5□□□□□ -0.41
COL6A2-201ENST00000300527 FSCN3Q9NQT6 498 aa12.5□□□□□ -0.41
COL6A2-201ENST00000300527 TRAV1-1A0A0B4J248 108 aa12.5□□□□□ -0.41
COL6A2-201ENST00000300527 KIR2DS1A0A191URI9 304 aa12.5□□□□□ -0.41
COL6A2-201ENST00000300527 KIR2DS4P43632 304 aa12.5□□□□□ -0.41
COL6A2-201ENST00000300527 OR3A1P47881 315 aa12.5□□□□□ -0.41
COL6A2-201ENST00000300527 PCP4P48539 62 aa12.5□□□□□ -0.41
COL6A2-201ENST00000300527 TGFBR3Q03167 851 aa12.5□□□□□ -0.41
COL6A2-201ENST00000300527 PRDX4Q13162 271 aa12.5□□□□□ -0.41
COL6A2-201ENST00000300527 KIR2DS1Q14954 304 aa12.5□□□□□ -0.41
COL6A2-201ENST00000300527 OR8B8Q15620 311 aa12.5□□□□□ -0.41
COL6A2-201ENST00000300527 MKXQ8IYA7 352 aa12.5□□□□□ -0.41
COL6A2-201ENST00000300527 ZNF808Q8N4W9 903 aaPredicted RBP12.5□□□□□ -0.41
COL6A2-201ENST00000300527 WDR61Q9GZS3 305 aaKnown RBP12.5□□□□□ -0.41
COL6A2-201ENST00000300527 CLEC1BQ9P126 229 aa12.5□□□□□ -0.41
COL6A2-201ENST00000300527 CLN8Q9UBY8 286 aa12.5□□□□□ -0.41
COL6A2-201ENST00000300527 EML6Q6ZMW3 1958 aa12.5□□□□□ -0.41
COL6A2-201ENST00000300527 COL4A2P08572 1712 aa12.5□□□□□ -0.41
COL6A2-201ENST00000300527 hCG_38984A0A1B0GV85 526 aa12.5□□□□□ -0.41
COL6A2-201ENST00000300527 IRF2P14316 349 aa12.5□□□□□ -0.41
COL6A2-201ENST00000300527 CD27P26842 260 aa12.5□□□□□ -0.41
COL6A2-201ENST00000300527 SLC25A53Q5H9E4 307 aa12.5□□□□□ -0.41
COL6A2-201ENST00000300527 DMRTA1Q5VZB9 504 aa12.5□□□□□ -0.41
COL6A2-201ENST00000300527 RHBDD2Q6NTF9 364 aa12.5□□□□□ -0.41
COL6A2-201ENST00000300527 MBD3L1Q8WWY6 194 aa12.5□□□□□ -0.41
COL6A2-201ENST00000300527 OR6C3Q9NZP0 311 aa12.5□□□□□ -0.41
COL6A2-201ENST00000300527 PPIAL4AQ9Y536 164 aa12.5□□□□□ -0.41
COL6A2-201ENST00000300527 A0A1B0GWJ7 208 aa12.49□□□□□ -0.41
COL6A2-201ENST00000300527 HPRT1P00492 218 aa12.49□□□□□ -0.41
COL6A2-201ENST00000300527 IL3RAP26951 378 aa12.49□□□□□ -0.41
COL6A2-201ENST00000300527 THBS3P49746 956 aa12.49□□□□□ -0.41
COL6A2-201ENST00000300527 SRYQ05066 204 aa12.49□□□□□ -0.41
COL6A2-201ENST00000300527 OR5I1Q13606 314 aa12.49□□□□□ -0.41
COL6A2-201ENST00000300527 ACOT6Q3I5F7 207 aaPredicted RBP12.49□□□□□ -0.41
COL6A2-201ENST00000300527 MRPL21Q7Z2W9 205 aaKnown RBP12.49□□□□□ -0.41
COL6A2-201ENST00000300527 VN1R17PQ8TDU5 208 aa12.49□□□□□ -0.41
COL6A2-201ENST00000300527 ACY3Q96HD9 319 aa12.49□□□□□ -0.41
COL6A2-201ENST00000300527 P2RX4Q99571 388 aa12.49□□□□□ -0.41
COL6A2-201ENST00000300527 WNT5BQ9H1J7 359 aa12.49□□□□□ -0.41
COL6A2-201ENST00000300527 TMEM38BQ9NVV0 291 aa12.49□□□□□ -0.41
COL6A2-201ENST00000300527 PIAS2O75928 621 aa12.49□□□□□ -0.41
COL6A2-201ENST00000300527 RPLP1P05386 114 aaKnown RBP12.49□□□□□ -0.41
COL6A2-201ENST00000300527 ZNF816Q0VGE8 651 aaPredicted RBP12.49□□□□□ -0.41
COL6A2-201ENST00000300527 LRRC75BQ2VPJ9 315 aa12.49□□□□□ -0.41
COL6A2-201ENST00000300527 ZNF709Q8N972 641 aa12.49□□□□□ -0.41
COL6A2-201ENST00000300527 DERL1Q9BUN8 251 aa12.49□□□□□ -0.41
COL6A2-201ENST00000300527 PTRH2Q9Y3E5 179 aaKnown RBP12.49□□□□□ -0.41
COL6A2-201ENST00000300527 LRP4O75096 1905 aa12.49□□□□□ -0.41
COL6A2-201ENST00000300527 SPINK4O60575 86 aa12.49□□□□□ -0.41
COL6A2-201ENST00000300527 C1QTNF9P0C862 333 aa12.49□□□□□ -0.41
COL6A2-201ENST00000300527 VASH2Q86V25 355 aa12.49□□□□□ -0.41
COL6A2-201ENST00000300527 OR2H1Q9GZK4 316 aa12.49□□□□□ -0.41
COL6A2-201ENST00000300527 MANBALQ9NQG1 85 aa12.49□□□□□ -0.41
COL6A2-201ENST00000300527 CHCHD2Q9Y6H1 151 aaPredicted RBP12.49□□□□□ -0.41
COL6A2-201ENST00000300527 C5orf49A4QMS7 147 aa12.48□□□□□ -0.41
COL6A2-201ENST00000300527 CCKARP32238 428 aa12.48□□□□□ -0.41
COL6A2-201ENST00000300527 PPP1CBP62140 327 aa12.48□□□□□ -0.41
COL6A2-201ENST00000300527 GBGT1Q8N5D6 347 aa12.48□□□□□ -0.41
COL6A2-201ENST00000300527 ZDHHC11Q9H8X9 412 aa12.48□□□□□ -0.41
COL6A2-201ENST00000300527 PLSCR2Q9NRY7 297 aa12.48□□□□□ -0.41
COL6A2-201ENST00000300527 RARRES3Q9UL19 164 aa12.48□□□□□ -0.41
COL6A2-201ENST00000300527 FRYQ5TBA9 3013 aa12.48□□□□□ -0.41
COL6A2-201ENST00000300527 C11orf94C9JXX5 98 aa12.48□□□□□ -0.41
COL6A2-201ENST00000300527 SIRPB1O00241 398 aa12.48□□□□□ -0.41
COL6A2-201ENST00000300527 SELEP16581 610 aa12.48□□□□□ -0.41
COL6A2-201ENST00000300527 EN2P19622 333 aaPredicted RBP12.48□□□□□ -0.41
COL6A2-201ENST00000300527 CARD18P57730 90 aa12.48□□□□□ -0.41
COL6A2-201ENST00000300527 TFF3Q07654 80 aa12.48□□□□□ -0.41
COL6A2-201ENST00000300527 SAMD10Q9BYL1 202 aa12.48□□□□□ -0.41
COL6A2-201ENST00000300527 TUBG2Q9NRH3 451 aa12.48□□□□□ -0.41
COL6A2-201ENST00000300527 MTCH1Q9NZJ7 389 aa12.48□□□□□ -0.41
COL6A2-201ENST00000300527 OR2W1Q9Y3N9 320 aa12.48□□□□□ -0.41
COL6A2-201ENST00000300527 IGKV1-39P01597 117 aa12.47□□□□□ -0.41
COL6A2-201ENST00000300527 IGKV1-5P01602 117 aa12.47□□□□□ -0.41
COL6A2-201ENST00000300527 IGKV1D-39P04432 117 aa12.47□□□□□ -0.41
COL6A2-201ENST00000300527 SP5Q6BEB4 398 aaPredicted RBP12.47□□□□□ -0.41
COL6A2-201ENST00000300527 DIRC2Q96SL1 478 aa12.47□□□□□ -0.41
COL6A2-201ENST00000300527 TRAV34A0A0B4J273 112 aa12.47□□□□□ -0.41
COL6A2-201ENST00000300527 LOC102725191A0A1B0GVB3 256 aa12.47□□□□□ -0.41
COL6A2-201ENST00000300527 TCF21O43680 179 aa12.47□□□□□ -0.41
COL6A2-201ENST00000300527 NDUFB4O95168 129 aa12.47□□□□□ -0.41
COL6A2-201ENST00000300527 VAMP5O95183 116 aa12.47□□□□□ -0.41
COL6A2-201ENST00000300527 SERPINA7P05543 415 aa12.47□□□□□ -0.41
COL6A2-201ENST00000300527 ARSJQ5FYB0 599 aaPredicted RBP12.47□□□□□ -0.41
COL6A2-201ENST00000300527 ACTL10Q5JWF8 245 aa12.47□□□□□ -0.41
COL6A2-201ENST00000300527 SGMS2Q8NHU3 365 aa12.47□□□□□ -0.41
COL6A2-201ENST00000300527 CMTM2Q8TAZ6 248 aa12.47□□□□□ -0.41
COL6A2-201ENST00000300527 PINX1Q96BK5 328 aaKnown RBP12.47□□□□□ -0.41
COL6A2-201ENST00000300527 NEIL1Q96FI4 390 aaPredicted RBP12.47□□□□□ -0.41
COL6A2-201ENST00000300527 ABHD14BQ96IU4 210 aa12.47□□□□□ -0.41
COL6A2-201ENST00000300527 ATP23Q9Y6H3 246 aa12.47□□□□□ -0.41
COL6A2-201ENST00000300527 A0A1W2PR77 199 aa12.47□□□□□ -0.41
COL6A2-201ENST00000300527 LILRA1O75019 489 aa12.47□□□□□ -0.41
COL6A2-201ENST00000300527 NAPSAO96009 420 aa12.47□□□□□ -0.41
COL6A2-201ENST00000300527 HIST1H3AP68431 136 aa12.47□□□□□ -0.41
COL6A2-201ENST00000300527 SERF2P84101 59 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms