RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 RASL12Q9NYN1 266 aa13.76□□□□□ -0.21
SHANK3-201ENST00000262795 ERVS71-1P61550 626 aa13.76□□□□□ -0.21
SHANK3-201ENST00000262795 MGAT2Q10469 447 aa13.76□□□□□ -0.21
SHANK3-201ENST00000262795 C12orf54Q6X4T0 127 aa13.76□□□□□ -0.21
SHANK3-201ENST00000262795 COL8A1P27658 744 aa13.76□□□□□ -0.21
SHANK3-201ENST00000262795 APOBEC3AP31941 199 aaPredicted RBP13.76□□□□□ -0.21
SHANK3-201ENST00000262795 HERPUD1Q15011 391 aa13.76□□□□□ -0.21
SHANK3-201ENST00000262795 SYS1Q8N2H4 156 aa13.76□□□□□ -0.21
SHANK3-201ENST00000262795 SYT8Q8NBV8 401 aa13.76□□□□□ -0.21
SHANK3-201ENST00000262795 SFXN3Q9BWM7 321 aa13.76□□□□□ -0.21
SHANK3-201ENST00000262795 DHRS7CA6NNS2 312 aa13.76□□□□□ -0.21
SHANK3-201ENST00000262795 CD33P20138 364 aa13.76□□□□□ -0.21
SHANK3-201ENST00000262795 GABRA6Q16445 453 aa13.76□□□□□ -0.21
SHANK3-201ENST00000262795 GPR137Q96N19 417 aa13.76□□□□□ -0.21
SHANK3-201ENST00000262795 LYRM2Q9NU23 88 aaPredicted RBP13.76□□□□□ -0.21
SHANK3-201ENST00000262795 IGHV3OR16-8A0A075B7F1 116 aa13.75□□□□□ -0.21
SHANK3-201ENST00000262795 ZNF737O75373 536 aa13.75□□□□□ -0.21
SHANK3-201ENST00000262795 ISG15P05161 165 aa13.75□□□□□ -0.21
SHANK3-201ENST00000262795 OR4C13Q8NGP0 309 aa13.75□□□□□ -0.21
SHANK3-201ENST00000262795 OR1L8Q8NGR8 309 aa13.75□□□□□ -0.21
SHANK3-201ENST00000262795 F5P12259 2224 aa13.75□□□□□ -0.21
SHANK3-201ENST00000262795 ZNF250P15622 560 aa13.75□□□□□ -0.21
SHANK3-201ENST00000262795 FAM53AQ6NSI3 398 aaPredicted RBP13.75□□□□□ -0.21
SHANK3-201ENST00000262795 SOCS1O15524 211 aa13.75□□□□□ -0.21
SHANK3-201ENST00000262795 SSX1Q16384 188 aa13.75□□□□□ -0.21
SHANK3-201ENST00000262795 OR2W3Q7Z3T1 314 aa13.75□□□□□ -0.21
SHANK3-201ENST00000262795 BAP18Q8IXM2 172 aa13.75□□□□□ -0.21
SHANK3-201ENST00000262795 MRAP2Q96G30 205 aa13.75□□□□□ -0.21
SHANK3-201ENST00000262795 HDHD3Q9BSH5 251 aaPredicted RBP13.75□□□□□ -0.21
SHANK3-201ENST00000262795 CELA3AP09093 270 aa13.75□□□□□ -0.21
SHANK3-201ENST00000262795 PSG6Q00889 435 aa13.75□□□□□ -0.21
SHANK3-201ENST00000262795 TMEM78Q5T7P6 136 aa13.75□□□□□ -0.21
SHANK3-201ENST00000262795 C9JCJ5 164 aa13.74□□□□□ -0.21
SHANK3-201ENST00000262795 M0R3E3 92 aa13.74□□□□□ -0.21
SHANK3-201ENST00000262795 IGF2P01344 180 aa13.74□□□□□ -0.21
SHANK3-201ENST00000262795 CTSBP07858 339 aa13.74□□□□□ -0.21
SHANK3-201ENST00000262795 COX6A1P12074 109 aa13.74□□□□□ -0.21
SHANK3-201ENST00000262795 CLLU1Q5K131 121 aa13.74□□□□□ -0.21
SHANK3-201ENST00000262795 RNF165Q6ZSG1 346 aa13.74□□□□□ -0.21
SHANK3-201ENST00000262795 SCMH1Q96GD3 660 aa13.74□□□□□ -0.21
SHANK3-201ENST00000262795 RHOVQ96L33 236 aa13.74□□□□□ -0.21
SHANK3-201ENST00000262795 CKAP5Q14008 2032 aa13.74□□□□□ -0.21
SHANK3-201ENST00000262795 RPL34P49207 117 aaKnown RBP13.74□□□□□ -0.21
SHANK3-201ENST00000262795 P2RY6Q15077 328 aa13.74□□□□□ -0.21
SHANK3-201ENST00000262795 PLPPR5Q32ZL2 321 aa13.74□□□□□ -0.21
SHANK3-201ENST00000262795 PEAR1Q5VY43 1037 aaPredicted RBP13.74□□□□□ -0.21
SHANK3-201ENST00000262795 MARVELD3Q96A59 401 aa13.74□□□□□ -0.21
SHANK3-201ENST00000262795 JMJD8Q96S16 334 aa13.74□□□□□ -0.21
SHANK3-201ENST00000262795 APC2O95996 2303 aa13.74□□□□□ -0.21
SHANK3-201ENST00000262795 FOXS1O43638 330 aa13.74□□□□□ -0.21
SHANK3-201ENST00000262795 ADAM11O75078 769 aa13.74□□□□□ -0.21
SHANK3-201ENST00000262795 POLR2GP62487 172 aaKnown RBP eCLIP13.74□□□□□ -0.21
SHANK3-201ENST00000262795 AP4M1O00189 453 aa13.74□□□□□ -0.21
SHANK3-201ENST00000262795 FGF5P12034 268 aa13.74□□□□□ -0.21
SHANK3-201ENST00000262795 LIAT1Q6ZQX7 453 aa13.74□□□□□ -0.21
SHANK3-201ENST00000262795 GTSCR1Q86UQ5 136 aa13.74□□□□□ -0.21
SHANK3-201ENST00000262795 MMP26Q9NRE1 261 aa13.74□□□□□ -0.21
SHANK3-201ENST00000262795 HS3ST3B1Q9Y662 390 aa13.74□□□□□ -0.21
SHANK3-201ENST00000262795 SLC17A2O00624 439 aa13.74□□□□□ -0.21
SHANK3-201ENST00000262795 P01737 135 aa13.74□□□□□ -0.21
SHANK3-201ENST00000262795 PSG2P11465 335 aa13.74□□□□□ -0.21
SHANK3-201ENST00000262795 BTF3P20290 206 aaKnown RBP13.74□□□□□ -0.21
SHANK3-201ENST00000262795 PSG4Q00888 419 aa13.74□□□□□ -0.21
SHANK3-201ENST00000262795 FAM201AQ5SY85 155 aa13.74□□□□□ -0.21
SHANK3-201ENST00000262795 C11orf87Q6NUJ2 197 aa13.74□□□□□ -0.21
SHANK3-201ENST00000262795 MELTFP08582 738 aa13.73□□□□□ -0.21
SHANK3-201ENST00000262795 TCTEX1D1Q8N7M0 179 aa13.73□□□□□ -0.21
SHANK3-201ENST00000262795 ICE1Q9Y2F5 2266 aa13.73□□□□□ -0.21
SHANK3-201ENST00000262795 H3BTX0 84 aa13.73□□□□□ -0.21
SHANK3-201ENST00000262795 RPL27AP46776 148 aaKnown RBP13.73□□□□□ -0.21
SHANK3-201ENST00000262795 SLC25A1P53007 311 aa13.73□□□□□ -0.21
SHANK3-201ENST00000262795 TMEM229BQ8NBD8 167 aa13.73□□□□□ -0.21
SHANK3-201ENST00000262795 PLEKHA2Q9HB19 425 aa13.73□□□□□ -0.21
SHANK3-201ENST00000262795 MAPK1IP1LQ8NDC0 245 aa13.73□□□□□ -0.21
SHANK3-201ENST00000262795 CCDC88CQ9P219 2028 aa13.73□□□□□ -0.21
SHANK3-201ENST00000262795 MPDU1O75352 247 aa13.73□□□□□ -0.21
SHANK3-201ENST00000262795 SLC6A1P30531 599 aa13.73□□□□□ -0.21
SHANK3-201ENST00000262795 ATP6V1FQ16864 119 aa13.73□□□□□ -0.21
SHANK3-201ENST00000262795 WDR73Q6P4I2 378 aa13.73□□□□□ -0.21
SHANK3-201ENST00000262795 ZNF485Q8NCK3 441 aa13.73□□□□□ -0.21
SHANK3-201ENST00000262795 OR1N2Q8NGR9 330 aa13.73□□□□□ -0.21
SHANK3-201ENST00000262795 FAM216AQ8WUB2 273 aa13.73□□□□□ -0.21
SHANK3-201ENST00000262795 J3QT63 122 aa13.73□□□□□ -0.21
SHANK3-201ENST00000262795 F12P00748 615 aaPredicted RBP13.73□□□□□ -0.21
SHANK3-201ENST00000262795 DLX1P56177 255 aa13.73□□□□□ -0.21
SHANK3-201ENST00000262795 COLCA1Q6ZS62 124 aa13.73□□□□□ -0.21
SHANK3-201ENST00000262795 RGPD3A6NKT7 1758 aaPredicted RBP13.73□□□□□ -0.21
SHANK3-201ENST00000262795 DXOO77932 396 aaKnown RBP13.72□□□□□ -0.21
SHANK3-201ENST00000262795 LIPFP07098 398 aa13.72□□□□□ -0.21
SHANK3-201ENST00000262795 C8orf46Q8TAG6 207 aa13.72□□□□□ -0.21
SHANK3-201ENST00000262795 GPR61Q9BZJ8 451 aa13.72□□□□□ -0.21
SHANK3-201ENST00000262795 SLC52A3Q9NQ40 469 aa13.72□□□□□ -0.21
SHANK3-201ENST00000262795 BRWD3Q6RI45 1802 aa13.72□□□□□ -0.21
SHANK3-201ENST00000262795 PEX11BO96011 259 aa13.72□□□□□ -0.21
SHANK3-201ENST00000262795 TMEM56-RWDD3S4R434 201 aa13.72□□□□□ -0.21
SHANK3-201ENST00000262795 SYNGR3O43761 229 aa13.72□□□□□ -0.21
SHANK3-201ENST00000262795 OR8A1Q8NGG7 326 aa13.72□□□□□ -0.21
SHANK3-201ENST00000262795 SRXN1Q9BYN0 137 aa13.72□□□□□ -0.21
SHANK3-201ENST00000262795 KLK8O60259 260 aa13.72□□□□□ -0.21
SHANK3-201ENST00000262795 ZNF56Q15929 161 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms