RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 DEFA5Q01523 94 aa11.46□□□□□ -0.58
NEK3-205ENST00000610828 MSMPQ1L6U9 139 aa11.46□□□□□ -0.58
NEK3-205ENST00000610828 VHLLQ6RSH7 139 aa11.46□□□□□ -0.58
NEK3-205ENST00000610828 RNASE11Q8TAA1 199 aaKnown RBP11.46□□□□□ -0.58
NEK3-205ENST00000610828 LRRC29Q8WV35 223 aa11.46□□□□□ -0.58
NEK3-205ENST00000610828 GALMQ96C23 342 aa11.46□□□□□ -0.58
NEK3-205ENST00000610828 CADP27708 2225 aa11.46□□□□□ -0.58
NEK3-205ENST00000610828 C12orf77C9JDV5 145 aa11.45□□□□□ -0.58
NEK3-205ENST00000610828 BMP5P22003 454 aa11.45□□□□□ -0.58
NEK3-205ENST00000610828 VAMP2P63027 116 aa11.45□□□□□ -0.58
NEK3-205ENST00000610828 COL10A1Q03692 680 aa11.45□□□□□ -0.58
NEK3-205ENST00000610828 FOXC1Q12948 553 aa11.45□□□□□ -0.58
NEK3-205ENST00000610828 OR1L1Q8NH94 360 aa11.45□□□□□ -0.58
NEK3-205ENST00000610828 FAM57AQ8TBR7 257 aa11.45□□□□□ -0.58
NEK3-205ENST00000610828 SFXN3Q9BWM7 321 aa11.45□□□□□ -0.58
NEK3-205ENST00000610828 C11orf1Q9H5F2 150 aa11.45□□□□□ -0.58
NEK3-205ENST00000610828 PLA2G2EQ9NZK7 142 aa11.45□□□□□ -0.58
NEK3-205ENST00000610828 METRNQ9UJH8 293 aa11.45□□□□□ -0.58
NEK3-205ENST00000610828 CHD3Q12873 2000 aaKnown RBP11.45□□□□□ -0.58
NEK3-205ENST00000610828 A0A0G2JRQ6 117 aa11.45□□□□□ -0.58
NEK3-205ENST00000610828 NUDT19A8MXV4 375 aa11.45□□□□□ -0.58
NEK3-205ENST00000610828 WRBO00258 174 aa11.45□□□□□ -0.58
NEK3-205ENST00000610828 OMGP23515 440 aa11.45□□□□□ -0.58
NEK3-205ENST00000610828 IL2RGP31785 369 aa11.45□□□□□ -0.58
NEK3-205ENST00000610828 SRSF3P84103 164 aaKnown RBP11.45□□□□□ -0.58
NEK3-205ENST00000610828 MZT1Q08AG7 82 aa11.45□□□□□ -0.58
NEK3-205ENST00000610828 SWI5Q1ZZU3 235 aa11.45□□□□□ -0.58
NEK3-205ENST00000610828 SLC35E4Q6ICL7 350 aa11.45□□□□□ -0.58
NEK3-205ENST00000610828 TPRX1Q8N7U7 411 aa11.45□□□□□ -0.58
NEK3-205ENST00000610828 MRGPRDQ8TDS7 321 aa11.45□□□□□ -0.58
NEK3-205ENST00000610828 COQ2Q96H96 371 aa11.45□□□□□ -0.58
NEK3-205ENST00000610828 AKR1E2Q96JD6 320 aa11.45□□□□□ -0.58
NEK3-205ENST00000610828 ESRP2Q9H6T0 727 aaKnown RBP11.45□□□□□ -0.58
NEK3-205ENST00000610828 APC2O95996 2303 aa11.44□□□□□ -0.58
NEK3-205ENST00000610828 ACACAQ13085 2346 aa11.44□□□□□ -0.58
NEK3-205ENST00000610828 OOEPA6NGQ2 149 aa11.44□□□□□ -0.58
NEK3-205ENST00000610828 ABCD4O14678 606 aa11.44□□□□□ -0.58
NEK3-205ENST00000610828 NUPL2O15504 423 aaKnown RBP11.44□□□□□ -0.58
NEK3-205ENST00000610828 ID3Q02535 119 aa11.44□□□□□ -0.58
NEK3-205ENST00000610828 PJVKQ0ZLH3 352 aa11.44□□□□□ -0.58
NEK3-205ENST00000610828 KRBOX4Q5JUW0 171 aa11.44□□□□□ -0.58
NEK3-205ENST00000610828 ATRAIDQ6UW56 229 aa11.44□□□□□ -0.58
NEK3-205ENST00000610828 IL34Q6ZMJ4 242 aa11.44□□□□□ -0.58
NEK3-205ENST00000610828 DRAM1Q8N682 238 aa11.44□□□□□ -0.58
NEK3-205ENST00000610828 PRR7Q8TB68 274 aa11.44□□□□□ -0.58
NEK3-205ENST00000610828 LRRC46Q96FV0 321 aa11.44□□□□□ -0.58
NEK3-205ENST00000610828 ABHD14BQ96IU4 210 aa11.44□□□□□ -0.58
NEK3-205ENST00000610828 TMEM231Q9H6L2 316 aa11.44□□□□□ -0.58
NEK3-205ENST00000610828 FAM212BQ9NTI7 297 aaPredicted RBP11.44□□□□□ -0.58
NEK3-205ENST00000610828 LYRM2Q9NU23 88 aaPredicted RBP11.44□□□□□ -0.58
NEK3-205ENST00000610828 TP53TG5Q9Y2B4 290 aa11.44□□□□□ -0.58
NEK3-205ENST00000610828 A0A1B0GWJ7 208 aa11.43□□□□□ -0.58
NEK3-205ENST00000610828 MEX3AA1L020 520 aaKnown RBP11.43□□□□□ -0.58
NEK3-205ENST00000610828 IGSF23A1L1A6 192 aa11.43□□□□□ -0.58
NEK3-205ENST00000610828 TMEM218A2RU14 115 aa11.43□□□□□ -0.58
NEK3-205ENST00000610828 HBZP02008 142 aa11.43□□□□□ -0.58
NEK3-205ENST00000610828 CEACAM8P31997 349 aaPredicted RBP11.43□□□□□ -0.58
NEK3-205ENST00000610828 ID4P47928 161 aa11.43□□□□□ -0.58
NEK3-205ENST00000610828 BLOC1S1P78537 153 aa11.43□□□□□ -0.58
NEK3-205ENST00000610828 FAM27E3Q08E93 113 aa11.43□□□□□ -0.58
NEK3-205ENST00000610828 CLINT1Q14677 625 aa11.43□□□□□ -0.58
NEK3-205ENST00000610828 IZUMO4Q1ZYL8 232 aa11.43□□□□□ -0.58
NEK3-205ENST00000610828 Q6ZRG5 221 aa11.43□□□□□ -0.58
NEK3-205ENST00000610828 HSD17B11Q8NBQ5 300 aa11.43□□□□□ -0.58
NEK3-205ENST00000610828 GPR146Q96CH1 333 aa11.43□□□□□ -0.58
NEK3-205ENST00000610828 ARV1Q9H2C2 271 aa11.43□□□□□ -0.58
NEK3-205ENST00000610828 PLEKHF2Q9H8W4 249 aa11.43□□□□□ -0.58
NEK3-205ENST00000610828 TREM1Q9NP99 234 aa11.43□□□□□ -0.58
NEK3-205ENST00000610828 LIN7CQ9NUP9 197 aaKnown RBP11.43□□□□□ -0.58
NEK3-205ENST00000610828 CACNA1DQ01668 2161 aa11.43□□□□□ -0.58
NEK3-205ENST00000610828 PIGBOS1A0A0B4J2F0 54 aa11.43□□□□□ -0.58
NEK3-205ENST00000610828 IFNL4K9M1U5 179 aa11.43□□□□□ -0.58
NEK3-205ENST00000610828 CHST1O43916 411 aa11.43□□□□□ -0.58
NEK3-205ENST00000610828 IGKV1-39P01597 117 aa11.43□□□□□ -0.58
NEK3-205ENST00000610828 IGKV1D-39P04432 117 aa11.43□□□□□ -0.58
NEK3-205ENST00000610828 GLIPR1P48060 266 aa11.43□□□□□ -0.58
NEK3-205ENST00000610828 KLF3P57682 345 aaPredicted RBP11.43□□□□□ -0.58
NEK3-205ENST00000610828 TAGLNQ01995 201 aaKnown RBP11.43□□□□□ -0.58
NEK3-205ENST00000610828 FAM53AQ6NSI3 398 aaPredicted RBP11.43□□□□□ -0.58
NEK3-205ENST00000610828 TMEM252Q8N6L7 170 aa11.43□□□□□ -0.58
NEK3-205ENST00000610828 OR52L2PQ8NGH6 319 aa11.43□□□□□ -0.58
NEK3-205ENST00000610828 NINJ1Q92982 152 aa11.43□□□□□ -0.58
NEK3-205ENST00000610828 GINS3Q9BRX5 216 aa11.43□□□□□ -0.58
NEK3-205ENST00000610828 SH3BGRL3Q9H299 93 aa11.43□□□□□ -0.58
NEK3-205ENST00000610828 RNF150Q9ULK6 438 aa11.43□□□□□ -0.58
NEK3-205ENST00000610828 AGPAT2O15120 278 aa11.42□□□□□ -0.58
NEK3-205ENST00000610828 TMEM50AO95807 157 aa11.42□□□□□ -0.58
NEK3-205ENST00000610828 IGHV3-13P01766 116 aa11.42□□□□□ -0.58
NEK3-205ENST00000610828 WNT2P09544 360 aa11.42□□□□□ -0.58
NEK3-205ENST00000610828 SEC11BP0C7V7 166 aa11.42□□□□□ -0.58
NEK3-205ENST00000610828 EGR1P18146 543 aa11.42□□□□□ -0.58
NEK3-205ENST00000610828 ATF4P18848 351 aaPredicted RBP11.42□□□□□ -0.58
NEK3-205ENST00000610828 GLRXP35754 106 aa11.42□□□□□ -0.58
NEK3-205ENST00000610828 OR2V2Q96R30 315 aa11.42□□□□□ -0.58
NEK3-205ENST00000610828 SLC25A31Q9H0C2 315 aa11.42□□□□□ -0.58
NEK3-205ENST00000610828 OR2D2Q9H210 308 aa11.42□□□□□ -0.58
NEK3-205ENST00000610828 PARP11Q9NR21 331 aa11.42□□□□□ -0.58
NEK3-205ENST00000610828 PIEZO2Q9H5I5 2752 aa11.42□□□□□ -0.58
NEK3-205ENST00000610828 A0A1B0GU03 582 aa11.42□□□□□ -0.58
NEK3-205ENST00000610828 A8MXE2 369 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms