RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 CTRB1P17538 263 aa9.57□□□□□ -0.88
CTCFL-221ENST00000608903 MEF2DQ14814 521 aa9.57□□□□□ -0.88
CTCFL-221ENST00000608903 C4orf46Q504U0 113 aa9.57□□□□□ -0.88
CTCFL-221ENST00000608903 IGSF11Q5DX21 431 aa9.57□□□□□ -0.88
CTCFL-221ENST00000608903 DCAF12L2Q5VW00 463 aa9.57□□□□□ -0.88
CTCFL-221ENST00000608903 CTRB2Q6GPI1 263 aa9.57□□□□□ -0.88
CTCFL-221ENST00000608903 OVCH2Q7RTZ1 564 aa9.57□□□□□ -0.88
CTCFL-221ENST00000608903 DNTTIP1Q9H147 329 aa9.57□□□□□ -0.88
CTCFL-221ENST00000608903 SDHAF2Q9NX18 166 aa9.57□□□□□ -0.88
CTCFL-221ENST00000608903 ANXA10Q9UJ72 324 aa9.57□□□□□ -0.88
CTCFL-221ENST00000608903 TMEM30CPA0ZSE6 113 aa9.56□□□□□ -0.88
CTCFL-221ENST00000608903 NMBP08949 121 aa9.56□□□□□ -0.88
CTCFL-221ENST00000608903 WNT2P09544 360 aa9.56□□□□□ -0.88
CTCFL-221ENST00000608903 CGB3P0DN86 165 aa9.56□□□□□ -0.88
CTCFL-221ENST00000608903 CGB7P0DN87 165 aa9.56□□□□□ -0.88
CTCFL-221ENST00000608903 GPR6P46095 362 aaPredicted RBP9.56□□□□□ -0.88
CTCFL-221ENST00000608903 KCNJ3P48549 501 aa9.56□□□□□ -0.88
CTCFL-221ENST00000608903 Q6ZS49 121 aa9.56□□□□□ -0.88
CTCFL-221ENST00000608903 OR2AK2Q8NG84 335 aa9.56□□□□□ -0.88
CTCFL-221ENST00000608903 RAB1CQ92928 201 aa9.56□□□□□ -0.88
CTCFL-221ENST00000608903 LINC00052Q96N35 136 aa9.56□□□□□ -0.88
CTCFL-221ENST00000608903 BPESC1Q9GZL8 116 aa9.56□□□□□ -0.88
CTCFL-221ENST00000608903 FAM234AQ9H0X4 552 aa9.56□□□□□ -0.88
CTCFL-221ENST00000608903 C19orf12Q9NSK7 152 aa9.56□□□□□ -0.88
CTCFL-221ENST00000608903 SLC25A10Q9UBX3 287 aaPredicted RBP9.56□□□□□ -0.88
CTCFL-221ENST00000608903 DOCK11Q5JSL3 2073 aa9.56□□□□□ -0.88
CTCFL-221ENST00000608903 MED13LQ71F56 2210 aa9.56□□□□□ -0.88
CTCFL-221ENST00000608903 ODAMA1E959 279 aa9.56□□□□□ -0.88
CTCFL-221ENST00000608903 NKX6-3A6NJ46 265 aa9.56□□□□□ -0.88
CTCFL-221ENST00000608903 NFYAP23511 347 aaPredicted RBP9.56□□□□□ -0.88
CTCFL-221ENST00000608903 SRSF7Q16629 238 aaKnown RBP eCLIP9.56□□□□□ -0.88
CTCFL-221ENST00000608903 TMEM155Q4W5P6 130 aa9.56□□□□□ -0.88
CTCFL-221ENST00000608903 UTF1Q5T230 341 aa9.56□□□□□ -0.88
CTCFL-221ENST00000608903 OR5AP2Q8NGF4 316 aa9.56□□□□□ -0.88
CTCFL-221ENST00000608903 MRGPRDQ8TDS7 321 aa9.56□□□□□ -0.88
CTCFL-221ENST00000608903 PRRT1Q99946 306 aa9.56□□□□□ -0.88
CTCFL-221ENST00000608903 RIMS4Q9H426 269 aaPredicted RBP9.56□□□□□ -0.88
CTCFL-221ENST00000608903 TRAPPC2LQ9UL33 140 aa9.56□□□□□ -0.88
CTCFL-221ENST00000608903 APCP25054 2843 aa9.55□□□□□ -0.88
CTCFL-221ENST00000608903 A8MXK9 166 aa9.55□□□□□ -0.88
CTCFL-221ENST00000608903 VWC2LB2RUY7 222 aa9.55□□□□□ -0.88
CTCFL-221ENST00000608903 TRDCB7Z8K6 153 aa9.55□□□□□ -0.88
CTCFL-221ENST00000608903 C12orf77C9JDV5 145 aa9.55□□□□□ -0.88
CTCFL-221ENST00000608903 F5H0A9 414 aaPredicted RBP9.55□□□□□ -0.88
CTCFL-221ENST00000608903 C15orf65H3BRN8 121 aa9.55□□□□□ -0.88
CTCFL-221ENST00000608903 GOSR2O14653 212 aa9.55□□□□□ -0.88
CTCFL-221ENST00000608903 NDUFA2O43678 99 aa9.55□□□□□ -0.88
CTCFL-221ENST00000608903 RGS11O94810 467 aa9.55□□□□□ -0.88
CTCFL-221ENST00000608903 NDUFB7P17568 137 aa9.55□□□□□ -0.88
CTCFL-221ENST00000608903 NUP62P37198 522 aaPredicted RBP9.55□□□□□ -0.88
CTCFL-221ENST00000608903 EDDM3BP56851 147 aa9.55□□□□□ -0.88
CTCFL-221ENST00000608903 ERVFRD-1P60508 538 aa9.55□□□□□ -0.88
CTCFL-221ENST00000608903 HMGN3Q15651 99 aa9.55□□□□□ -0.88
CTCFL-221ENST00000608903 CR1LQ2VPA4 569 aa9.55□□□□□ -0.88
CTCFL-221ENST00000608903 PEG10Q86TG7 708 aaKnown RBP9.55□□□□□ -0.88
CTCFL-221ENST00000608903 ADAD2Q8NCV1 583 aaKnown RBP9.55□□□□□ -0.88
CTCFL-221ENST00000608903 OR5D13Q8NGL4 314 aa9.55□□□□□ -0.88
CTCFL-221ENST00000608903 OR1L1Q8NH94 360 aa9.55□□□□□ -0.88
CTCFL-221ENST00000608903 C10orf105Q8TEF2 133 aa9.55□□□□□ -0.88
CTCFL-221ENST00000608903 CXorf58Q96LI9 332 aa9.55□□□□□ -0.88
CTCFL-221ENST00000608903 ARPC5LQ9BPX5 153 aa9.55□□□□□ -0.88
CTCFL-221ENST00000608903 ZNF286AQ9HBT8 521 aa9.55□□□□□ -0.88
CTCFL-221ENST00000608903 EDARQ9UNE0 448 aa9.55□□□□□ -0.88
CTCFL-221ENST00000608903 HMSDA8MTL9 139 aa9.55□□□□□ -0.88
CTCFL-221ENST00000608903 NDUFB3O43676 98 aa9.55□□□□□ -0.88
CTCFL-221ENST00000608903 SSTR5P35346 364 aa9.55□□□□□ -0.88
CTCFL-221ENST00000608903 PDLIM4P50479 330 aa9.55□□□□□ -0.88
CTCFL-221ENST00000608903 HLA-DRB3P79483 266 aa9.55□□□□□ -0.88
CTCFL-221ENST00000608903 DHRS2Q13268 280 aa9.55□□□□□ -0.88
CTCFL-221ENST00000608903 LY6G6FQ5SQ64 297 aa9.55□□□□□ -0.88
CTCFL-221ENST00000608903 ZNF660Q6AZW8 331 aaPredicted RBP9.55□□□□□ -0.88
CTCFL-221ENST00000608903 PPP1R35Q8TAP8 253 aa9.55□□□□□ -0.88
CTCFL-221ENST00000608903 SCARB1Q8WTV0 552 aa9.55□□□□□ -0.88
CTCFL-221ENST00000608903 TIMD4Q96H15 378 aa9.55□□□□□ -0.88
CTCFL-221ENST00000608903 PATZ1Q9HBE1 687 aaKnown RBP9.55□□□□□ -0.88
CTCFL-221ENST00000608903 TAF9BQ9HBM6 251 aa9.55□□□□□ -0.88
CTCFL-221ENST00000608903 OPN4Q9UHM6 478 aa9.55□□□□□ -0.88
CTCFL-221ENST00000608903 SESN1Q9Y6P5 492 aa9.55□□□□□ -0.88
CTCFL-221ENST00000608903 IGHV4-30-2A0A087WSY4 118 aa9.54□□□□□ -0.88
CTCFL-221ENST00000608903 KRBOX1C9JBD0 128 aa9.54□□□□□ -0.88
CTCFL-221ENST00000608903 TBPP20226 339 aa9.54□□□□□ -0.88
CTCFL-221ENST00000608903 ZBTB25P24278 435 aa9.54□□□□□ -0.88
CTCFL-221ENST00000608903 S100A11P31949 105 aa9.54□□□□□ -0.88
CTCFL-221ENST00000608903 PPP1R1AQ13522 171 aa9.54□□□□□ -0.88
CTCFL-221ENST00000608903 ZNF273Q14593 569 aa9.54□□□□□ -0.88
CTCFL-221ENST00000608903 C17orf58Q2M2W7 97 aa9.54□□□□□ -0.88
CTCFL-221ENST00000608903 CHRFAM7AQ494W8 412 aa9.54□□□□□ -0.88
CTCFL-221ENST00000608903 VAX1Q5SQQ9 334 aa9.54□□□□□ -0.88
CTCFL-221ENST00000608903 TMEM200BQ69YZ2 307 aa9.54□□□□□ -0.88
CTCFL-221ENST00000608903 FAM122CQ6P4D5 195 aa9.54□□□□□ -0.88
CTCFL-221ENST00000608903 SLC25A42Q86VD7 318 aa9.54□□□□□ -0.88
CTCFL-221ENST00000608903 LDLRAD3Q86YD5 345 aa9.54□□□□□ -0.88
CTCFL-221ENST00000608903 C12orf45Q8N5I9 185 aaPredicted RBP9.54□□□□□ -0.88
CTCFL-221ENST00000608903 OR5H2Q8NGV7 314 aa9.54□□□□□ -0.88
CTCFL-221ENST00000608903 RFESDQ8TAC1 157 aa9.54□□□□□ -0.88
CTCFL-221ENST00000608903 MARCH1Q8TCQ1 289 aa9.54□□□□□ -0.88
CTCFL-221ENST00000608903 KIRREL1Q96J84 757 aa9.54□□□□□ -0.88
CTCFL-221ENST00000608903 PARP12Q9H0J9 701 aaKnown RBP9.54□□□□□ -0.88
CTCFL-221ENST00000608903 PHF1O43189 567 aaPredicted RBP9.53□□□□□ -0.88
CTCFL-221ENST00000608903 MMP23AO75900 390 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms