RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 VCANP13611 3396 aa9.09□□□□□ -0.95
USB1-212ENST00000566082 H0Y8G0 127 aa9.08□□□□□ -0.96
USB1-212ENST00000566082 FCN1O00602 326 aa9.08□□□□□ -0.96
USB1-212ENST00000566082 CA11O75493 328 aa9.08□□□□□ -0.96
USB1-212ENST00000566082 ARR3P36575 388 aa9.08□□□□□ -0.96
USB1-212ENST00000566082 GPR12P47775 334 aa9.08□□□□□ -0.96
USB1-212ENST00000566082 CD81P60033 236 aa9.08□□□□□ -0.96
USB1-212ENST00000566082 SUMO1P63165 101 aaKnown RBP9.08□□□□□ -0.96
USB1-212ENST00000566082 QRFPP83859 136 aa9.08□□□□□ -0.96
USB1-212ENST00000566082 RNF151Q2KHN1 245 aa9.08□□□□□ -0.96
USB1-212ENST00000566082 TIGITQ495A1 244 aa9.08□□□□□ -0.96
USB1-212ENST00000566082 ZNF506Q5JVG8 444 aa9.08□□□□□ -0.96
USB1-212ENST00000566082 PHYHD1Q5SRE7 291 aa9.08□□□□□ -0.96
USB1-212ENST00000566082 BTNL3Q6UXE8 466 aa9.08□□□□□ -0.96
USB1-212ENST00000566082 DPPA3Q6W0C5 159 aa9.08□□□□□ -0.96
USB1-212ENST00000566082 RNF166Q96A37 237 aaPredicted RBP9.08□□□□□ -0.96
USB1-212ENST00000566082 TMEM147Q9BVK8 224 aa9.08□□□□□ -0.96
USB1-212ENST00000566082 CBLN4Q9NTU7 201 aa9.08□□□□□ -0.96
USB1-212ENST00000566082 K7N7A8 449 aa9.08□□□□□ -0.96
USB1-212ENST00000566082 LIFP15018 202 aa9.08□□□□□ -0.96
USB1-212ENST00000566082 HIST1H1BP16401 226 aaKnown RBP9.08□□□□□ -0.96
USB1-212ENST00000566082 CCKARP32238 428 aa9.08□□□□□ -0.96
USB1-212ENST00000566082 SELENOVP59797 346 aa9.08□□□□□ -0.96
USB1-212ENST00000566082 ELOBQ15370 118 aa9.08□□□□□ -0.96
USB1-212ENST00000566082 FAM89BQ8N5H3 189 aa9.08□□□□□ -0.96
USB1-212ENST00000566082 MARS2Q96GW9 593 aaKnown RBP9.08□□□□□ -0.96
USB1-212ENST00000566082 TBX15Q96SF7 602 aa9.08□□□□□ -0.96
USB1-212ENST00000566082 ATG101Q9BSB4 218 aa9.08□□□□□ -0.96
USB1-212ENST00000566082 DDA1Q9BW61 102 aa9.08□□□□□ -0.96
USB1-212ENST00000566082 TAAR3PQ9P1P4 343 aa9.08□□□□□ -0.96
USB1-212ENST00000566082 SHANK1Q9Y566 2161 aa9.08□□□□□ -0.96
USB1-212ENST00000566082 PGLYRP1O75594 196 aaPredicted RBP9.08□□□□□ -0.96
USB1-212ENST00000566082 G6PCP35575 357 aa9.08□□□□□ -0.96
USB1-212ENST00000566082 POC1BQ8TC44 478 aa9.08□□□□□ -0.96
USB1-212ENST00000566082 LYZL4Q96KX0 146 aa9.08□□□□□ -0.96
USB1-212ENST00000566082 ZNF331Q9NQX6 463 aaPredicted RBP9.08□□□□□ -0.96
USB1-212ENST00000566082 NAT8BQ9UHF3 227 aa9.08□□□□□ -0.96
USB1-212ENST00000566082 CBY1Q9Y3M2 126 aa9.08□□□□□ -0.96
USB1-212ENST00000566082 THSD7BQ9C0I4 1608 aa9.08□□□□□ -0.96
USB1-212ENST00000566082 PTPRZ1P23471 2315 aaPredicted RBP9.08□□□□□ -0.96
USB1-212ENST00000566082 KIAA2026Q5HYC2 2103 aa9.08□□□□□ -0.96
USB1-212ENST00000566082 A0A0C4DFX4 3053 aa9.08□□□□□ -0.96
USB1-212ENST00000566082 HSBP1L1C9JCN9 74 aa9.07□□□□□ -0.96
USB1-212ENST00000566082 LAMTOR5O43504 91 aa9.07□□□□□ -0.96
USB1-212ENST00000566082 TIAF1O95411 115 aa9.07□□□□□ -0.96
USB1-212ENST00000566082 LINC00271P0C7V0 271 aa9.07□□□□□ -0.96
USB1-212ENST00000566082 CRISP2P16562 243 aa9.07□□□□□ -0.96
USB1-212ENST00000566082 EGR1P18146 543 aa9.07□□□□□ -0.96
USB1-212ENST00000566082 SERF2P84101 59 aa9.07□□□□□ -0.96
USB1-212ENST00000566082 PAX5Q02548 391 aa9.07□□□□□ -0.96
USB1-212ENST00000566082 CADM4Q8NFZ8 388 aa9.07□□□□□ -0.96
USB1-212ENST00000566082 SGMS2Q8NHU3 365 aa9.07□□□□□ -0.96
USB1-212ENST00000566082 DEFB127Q9H1M4 99 aa9.07□□□□□ -0.96
USB1-212ENST00000566082 GPR35Q9HC97 309 aa9.07□□□□□ -0.96
USB1-212ENST00000566082 DOCK7Q96N67 2140 aa9.07□□□□□ -0.96
USB1-212ENST00000566082 LOC102723971A0A1B0GUV8 181 aa9.07□□□□□ -0.96
USB1-212ENST00000566082 SLC22A20A6NK97 555 aa9.07□□□□□ -0.96
USB1-212ENST00000566082 SLC31A2O15432 143 aa9.07□□□□□ -0.96
USB1-212ENST00000566082 SRD5A2P31213 254 aa9.07□□□□□ -0.96
USB1-212ENST00000566082 FABP6P51161 128 aa9.07□□□□□ -0.96
USB1-212ENST00000566082 CNN1P51911 297 aaKnown RBP9.07□□□□□ -0.96
USB1-212ENST00000566082 CALHM1Q8IU99 346 aa9.07□□□□□ -0.96
USB1-212ENST00000566082 KDF1Q8NAX2 398 aaPredicted RBP9.07□□□□□ -0.96
USB1-212ENST00000566082 DTD1Q8TEA8 209 aa9.07□□□□□ -0.96
USB1-212ENST00000566082 CTXND1A0A1B0GTU2 59 aa9.07□□□□□ -0.96
USB1-212ENST00000566082 WIPF3A6NGB9 483 aa9.07□□□□□ -0.96
USB1-212ENST00000566082 H0Y980 276 aa9.07□□□□□ -0.96
USB1-212ENST00000566082 CLPSP04118 112 aa9.07□□□□□ -0.96
USB1-212ENST00000566082 ERVFRD-1P60508 538 aa9.07□□□□□ -0.96
USB1-212ENST00000566082 ICAM4Q14773 271 aa9.07□□□□□ -0.96
USB1-212ENST00000566082 RTP5Q14D33 572 aa9.07□□□□□ -0.96
USB1-212ENST00000566082 VN1R17PQ8TDU5 208 aa9.07□□□□□ -0.96
USB1-212ENST00000566082 RCC1LQ96I51 464 aaKnown RBP9.07□□□□□ -0.96
USB1-212ENST00000566082 NOL4LQ96MY1 436 aaPredicted RBP9.07□□□□□ -0.96
USB1-212ENST00000566082 KCNIP2Q9NS61 270 aa9.07□□□□□ -0.96
USB1-212ENST00000566082 PSG11Q9UQ72 335 aa9.07□□□□□ -0.96
USB1-212ENST00000566082 CLDN16Q9Y5I7 305 aa9.07□□□□□ -0.96
USB1-212ENST00000566082 SYNGR1O43759 233 aa9.06□□□□□ -0.96
USB1-212ENST00000566082 FCGR3BO75015 233 aa9.06□□□□□ -0.96
USB1-212ENST00000566082 AMTP48728 403 aa9.06□□□□□ -0.96
USB1-212ENST00000566082 TMEM183BQ1AE95 376 aa9.06□□□□□ -0.96
USB1-212ENST00000566082 WDR74Q6RFH5 385 aaPredicted RBP9.06□□□□□ -0.96
USB1-212ENST00000566082 MRGPRDQ8TDS7 321 aa9.06□□□□□ -0.96
USB1-212ENST00000566082 TAF15Q92804 592 aaKnown RBP eCLIP9.06□□□□□ -0.96
USB1-212ENST00000566082 ANAPC16Q96DE5 110 aa9.06□□□□□ -0.96
USB1-212ENST00000566082 SF3B5Q9BWJ5 86 aaKnown RBP9.06□□□□□ -0.96
USB1-212ENST00000566082 RNF122Q9H9V4 155 aa9.06□□□□□ -0.96
USB1-212ENST00000566082 EPOPA6NHQ4 379 aa9.06□□□□□ -0.96
USB1-212ENST00000566082 LRRC3CA6NJW4 275 aa9.06□□□□□ -0.96
USB1-212ENST00000566082 CDIPTO14735 213 aa9.06□□□□□ -0.96
USB1-212ENST00000566082 EFNA2O43921 213 aa9.06□□□□□ -0.96
USB1-212ENST00000566082 HRASP01112 189 aa9.06□□□□□ -0.96
USB1-212ENST00000566082 CCL4P13236 92 aa9.06□□□□□ -0.96
USB1-212ENST00000566082 HOXA6P31267 233 aa9.06□□□□□ -0.96
USB1-212ENST00000566082 PMELP40967 661 aa9.06□□□□□ -0.96
USB1-212ENST00000566082 UCP3P55916 312 aa9.06□□□□□ -0.96
USB1-212ENST00000566082 TCL1AP56279 114 aa9.06□□□□□ -0.96
USB1-212ENST00000566082 CLDND2Q8NHS1 167 aa9.06□□□□□ -0.96
USB1-212ENST00000566082 MSI2Q96DH6 328 aaKnown RBP9.06□□□□□ -0.96
USB1-212ENST00000566082 TMEM68Q96MH6 324 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms