RNA–Protein interactions for RNA: ENST00000561743.5

USB1-205, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 3 BASIC

Gene USB1, Length 1,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-205ENST00000561743 PHYHIPQ92561 330 aa10.66□□□□□ -0.7
USB1-205ENST00000561743 RBMXL1Q96E39 390 aaKnown RBP10.66□□□□□ -0.7
USB1-205ENST00000561743 CST11Q9H112 138 aa10.66□□□□□ -0.7
USB1-205ENST00000561743 TAF9BQ9HBM6 251 aa10.66□□□□□ -0.7
USB1-205ENST00000561743 RAB9BQ9NP90 201 aa10.66□□□□□ -0.7
USB1-205ENST00000561743 PLSCR3Q9NRY6 295 aa10.66□□□□□ -0.7
USB1-205ENST00000561743 AURKAIP1Q9NWT8 199 aaPredicted RBP10.66□□□□□ -0.7
USB1-205ENST00000561743 NCBP2LA6PVI3 153 aaKnown RBP10.65□□□□□ -0.7
USB1-205ENST00000561743 TXNL1O43396 289 aa10.65□□□□□ -0.7
USB1-205ENST00000561743 MPIG6BO95866 241 aa10.65□□□□□ -0.7
USB1-205ENST00000561743 MOSP00540 346 aa10.65□□□□□ -0.7
USB1-205ENST00000561743 UBBP0CG47 229 aa10.65□□□□□ -0.7
USB1-205ENST00000561743 GPR12P47775 334 aa10.65□□□□□ -0.7
USB1-205ENST00000561743 RPL23AP62750 156 aaKnown RBP10.65□□□□□ -0.7
USB1-205ENST00000561743 IRF3Q14653 427 aa10.65□□□□□ -0.7
USB1-205ENST00000561743 GNMTQ14749 295 aa10.65□□□□□ -0.7
USB1-205ENST00000561743 MED22Q15528 200 aa10.65□□□□□ -0.7
USB1-205ENST00000561743 MORN2Q502X0 79 aa10.65□□□□□ -0.7
USB1-205ENST00000561743 C1orf100Q5SVJ3 147 aa10.65□□□□□ -0.7
USB1-205ENST00000561743 GLT8D1Q68CQ7 371 aa10.65□□□□□ -0.7
USB1-205ENST00000561743 OR10K2Q6IF99 312 aa10.65□□□□□ -0.7
USB1-205ENST00000561743 ETV3LQ6ZN32 361 aa10.65□□□□□ -0.7
USB1-205ENST00000561743 C5orf24Q7Z6I8 188 aa10.65□□□□□ -0.7
USB1-205ENST00000561743 ZNF554Q86TJ5 538 aa10.65□□□□□ -0.7
USB1-205ENST00000561743 FOXRED2Q8IWF2 684 aa10.65□□□□□ -0.7
USB1-205ENST00000561743 STPG2Q8N412 459 aa10.65□□□□□ -0.7
USB1-205ENST00000561743 SULT4A1Q9BR01 284 aa10.65□□□□□ -0.7
USB1-205ENST00000561743 ABCG5Q9H222 651 aa10.65□□□□□ -0.7
USB1-205ENST00000561743 KCNK15Q9H427 330 aa10.65□□□□□ -0.7
USB1-205ENST00000561743 OR2S2Q9NQN1 319 aa10.65□□□□□ -0.7
USB1-205ENST00000561743 LIN7CQ9NUP9 197 aaKnown RBP10.65□□□□□ -0.7
USB1-205ENST00000561743 SCN3BQ9NY72 215 aa10.65□□□□□ -0.7
USB1-205ENST00000561743 UCHL1P09936 223 aa10.64□□□□□ -0.71
USB1-205ENST00000561743 CD37P11049 281 aa10.64□□□□□ -0.71
USB1-205ENST00000561743 SRMP19623 302 aa10.64□□□□□ -0.71
USB1-205ENST00000561743 CHATP28329 748 aa10.64□□□□□ -0.71
USB1-205ENST00000561743 RPS27AP62979 156 aaKnown RBP10.64□□□□□ -0.71
USB1-205ENST00000561743 UNC119Q13432 240 aa10.64□□□□□ -0.71
USB1-205ENST00000561743 NKAPLQ5M9Q1 402 aa10.64□□□□□ -0.71
USB1-205ENST00000561743 STEAP3Q658P3 488 aa10.64□□□□□ -0.71
USB1-205ENST00000561743 C18orf65Q6ZTR6 163 aa10.64□□□□□ -0.71
USB1-205ENST00000561743 OR2W3Q7Z3T1 314 aa10.64□□□□□ -0.71
USB1-205ENST00000561743 CEACAM19Q7Z692 300 aa10.64□□□□□ -0.71
USB1-205ENST00000561743 LINC00482Q8N8I6 264 aa10.64□□□□□ -0.71
USB1-205ENST00000561743 OR52L2PQ8NGH6 319 aa10.64□□□□□ -0.71
USB1-205ENST00000561743 MRAPQ8TCY5 172 aa10.64□□□□□ -0.71
USB1-205ENST00000561743 RCC1LQ96I51 464 aaKnown RBP10.64□□□□□ -0.71
USB1-205ENST00000561743 S1PR3Q99500 378 aa10.64□□□□□ -0.71
USB1-205ENST00000561743 TMEM59Q9BXS4 323 aa10.64□□□□□ -0.71
USB1-205ENST00000561743 KCNIP1Q9NZI2 227 aa10.64□□□□□ -0.71
USB1-205ENST00000561743 JPT1Q9UK76 154 aa10.64□□□□□ -0.71
USB1-205ENST00000561743 AP4M1O00189 453 aa10.63□□□□□ -0.71
USB1-205ENST00000561743 SLC22A1O15245 554 aa10.63□□□□□ -0.71
USB1-205ENST00000561743 LANCL1O43813 399 aa10.63□□□□□ -0.71
USB1-205ENST00000561743 HTR2CP28335 458 aa10.63□□□□□ -0.71
USB1-205ENST00000561743 PPP1CCP36873 323 aaKnown RBP10.63□□□□□ -0.71
USB1-205ENST00000561743 THBS3P49746 956 aa10.63□□□□□ -0.71
USB1-205ENST00000561743 F2RL1P55085 397 aa10.63□□□□□ -0.71
USB1-205ENST00000561743 SLC35B1P78383 322 aa10.63□□□□□ -0.71
USB1-205ENST00000561743 QRFPP83859 136 aa10.63□□□□□ -0.71
USB1-205ENST00000561743 HTD2P86397 168 aa10.63□□□□□ -0.71
USB1-205ENST00000561743 LSAMPQ13449 338 aa10.63□□□□□ -0.71
USB1-205ENST00000561743 HSD17B12Q53GQ0 312 aa10.63□□□□□ -0.71
USB1-205ENST00000561743 LIPKQ5VXJ0 399 aa10.63□□□□□ -0.71
USB1-205ENST00000561743 C6orf201Q7Z4U5 140 aa10.63□□□□□ -0.71
USB1-205ENST00000561743 ODF3L1Q8IXM7 274 aa10.63□□□□□ -0.71
USB1-205ENST00000561743 FAM71E2Q8N5Q1 922 aa10.63□□□□□ -0.71
USB1-205ENST00000561743 COMMD1Q8N668 190 aa10.63□□□□□ -0.71
USB1-205ENST00000561743 OR8H1Q8NGG4 311 aa10.63□□□□□ -0.71
USB1-205ENST00000561743 TMEM203Q969S6 136 aa10.63□□□□□ -0.71
USB1-205ENST00000561743 NEDD4LQ96PU5 975 aa10.63□□□□□ -0.71
USB1-205ENST00000561743 NICN1Q9BSH3 213 aa10.63□□□□□ -0.71
USB1-205ENST00000561743 FAAP24Q9BTP7 215 aa10.63□□□□□ -0.71
USB1-205ENST00000561743 ABHD14AQ9BUJ0 271 aa10.63□□□□□ -0.71
USB1-205ENST00000561743 TM2D1Q9BX74 207 aa10.63□□□□□ -0.71
USB1-205ENST00000561743 DUSP21Q9H596 190 aa10.63□□□□□ -0.71
USB1-205ENST00000561743 TMEM14DPA8MWL7 114 aa10.62□□□□□ -0.71
USB1-205ENST00000561743 DUS4LO95620 317 aaKnown RBP10.62□□□□□ -0.71
USB1-205ENST00000561743 MYF6P23409 242 aa10.62□□□□□ -0.71
USB1-205ENST00000561743 HMGN3Q15651 99 aa10.62□□□□□ -0.71
USB1-205ENST00000561743 TMEM91Q6ZNR0 172 aa10.62□□□□□ -0.71
USB1-205ENST00000561743 C8orf86Q6ZUL3 223 aa10.62□□□□□ -0.71
USB1-205ENST00000561743 MRPL41Q8IXM3 137 aaKnown RBP10.62□□□□□ -0.71
USB1-205ENST00000561743 KLHL30-AS1Q8NEE0 82 aa10.62□□□□□ -0.71
USB1-205ENST00000561743 OR51D1Q8NGF3 324 aa10.62□□□□□ -0.71
USB1-205ENST00000561743 KCNG3Q8TAE7 436 aa10.62□□□□□ -0.71
USB1-205ENST00000561743 UFD1Q92890 307 aa10.62□□□□□ -0.71
USB1-205ENST00000561743 GFI1Q99684 422 aa10.62□□□□□ -0.71
USB1-205ENST00000561743 HSPB9Q9BQS6 159 aa10.62□□□□□ -0.71
USB1-205ENST00000561743 ANKRD60Q9BZ19 345 aa10.62□□□□□ -0.71
USB1-205ENST00000561743 ZFP57Q9NU63 452 aa10.62□□□□□ -0.71
USB1-205ENST00000561743 TPRKBQ9Y3C4 175 aa10.62□□□□□ -0.71
USB1-205ENST00000561743 A0A0A6YYD4 124 aa10.61□□□□□ -0.71
USB1-205ENST00000561743 YPEL1O60688 119 aa10.61□□□□□ -0.71
USB1-205ENST00000561743 BPNT1O95861 308 aa10.61□□□□□ -0.71
USB1-205ENST00000561743 NAPSAO96009 420 aa10.61□□□□□ -0.71
USB1-205ENST00000561743 SLC6A1P30531 599 aa10.61□□□□□ -0.71
USB1-205ENST00000561743 KRTAP10-11P60412 298 aa10.61□□□□□ -0.71
USB1-205ENST00000561743 RPS25P62851 125 aaKnown RBP10.61□□□□□ -0.71
USB1-205ENST00000561743 TPBGQ13641 420 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms