RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 CT45A1Q5HYN5 189 aa11.15□□□□□ -0.62
SNX6-210ENST00000557341 LAIR2Q6ISS4 152 aa11.15□□□□□ -0.62
SNX6-210ENST00000557341 ZNF554Q86TJ5 538 aa11.15□□□□□ -0.62
SNX6-210ENST00000557341 FAM71E2Q8N5Q1 922 aa11.15□□□□□ -0.62
SNX6-210ENST00000557341 BPIFB6Q8NFQ5 453 aa11.15□□□□□ -0.62
SNX6-210ENST00000557341 OR1L1Q8NH94 360 aa11.15□□□□□ -0.62
SNX6-210ENST00000557341 CT45A3Q8NHU0 189 aa11.15□□□□□ -0.62
SNX6-210ENST00000557341 FBLIM1Q8WUP2 373 aa11.15□□□□□ -0.62
SNX6-210ENST00000557341 FAM46BQ96A09 425 aa11.15□□□□□ -0.62
SNX6-210ENST00000557341 S1PR3Q99500 378 aa11.15□□□□□ -0.62
SNX6-210ENST00000557341 P2RX4Q99571 388 aa11.15□□□□□ -0.62
SNX6-210ENST00000557341 VCXQ9H320 206 aa11.15□□□□□ -0.62
SNX6-210ENST00000557341 TAF9BQ9HBM6 251 aa11.15□□□□□ -0.62
SNX6-210ENST00000557341 MBNL3Q9NUK0 354 aaKnown RBP11.15□□□□□ -0.62
SNX6-210ENST00000557341 KCNIP1Q9NZI2 227 aa11.15□□□□□ -0.62
SNX6-210ENST00000557341 GHRLQ9UBU3 117 aa11.15□□□□□ -0.62
SNX6-210ENST00000557341 JPT1Q9UK76 154 aa11.15□□□□□ -0.62
SNX6-210ENST00000557341 ERGIC3Q9Y282 383 aa11.15□□□□□ -0.62
SNX6-210ENST00000557341 WI2-2373I1.2A0A1W2PRP0 233 aa11.14□□□□□ -0.63
SNX6-210ENST00000557341 UBE2QL1A1L167 161 aa11.14□□□□□ -0.63
SNX6-210ENST00000557341 LINC01548A6NM66 108 aa11.14□□□□□ -0.63
SNX6-210ENST00000557341 ZNF736B4DX44 427 aaPredicted RBP11.14□□□□□ -0.63
SNX6-210ENST00000557341 LANCL1O43813 399 aa11.14□□□□□ -0.63
SNX6-210ENST00000557341 VHLP40337 213 aa11.14□□□□□ -0.63
SNX6-210ENST00000557341 ZNF134P52741 427 aa11.14□□□□□ -0.63
SNX6-210ENST00000557341 LSAMPQ13449 338 aa11.14□□□□□ -0.63
SNX6-210ENST00000557341 PNLIPRP3Q17RR3 467 aa11.14□□□□□ -0.63
SNX6-210ENST00000557341 CXorf66Q5JRM2 361 aaPredicted RBP11.14□□□□□ -0.63
SNX6-210ENST00000557341 OGFRL1Q5TC84 451 aaPredicted RBP11.14□□□□□ -0.63
SNX6-210ENST00000557341 STEAP3Q658P3 488 aa11.14□□□□□ -0.63
SNX6-210ENST00000557341 SIGIRRQ6IA17 410 aa11.14□□□□□ -0.63
SNX6-210ENST00000557341 NANOGP1Q8N7R0 232 aa11.14□□□□□ -0.63
SNX6-210ENST00000557341 ABHD14AQ9BUJ0 271 aa11.14□□□□□ -0.63
SNX6-210ENST00000557341 MND1Q9BWT6 205 aa11.14□□□□□ -0.63
SNX6-210ENST00000557341 OR2S2Q9NQN1 319 aa11.14□□□□□ -0.63
SNX6-210ENST00000557341 PLSCR3Q9NRY6 295 aa11.14□□□□□ -0.63
SNX6-210ENST00000557341 H0YHG0 523 aa11.13□□□□□ -0.63
SNX6-210ENST00000557341 CASQ2O14958 399 aaPredicted RBP11.13□□□□□ -0.63
SNX6-210ENST00000557341 RPLP1P05386 114 aaKnown RBP11.13□□□□□ -0.63
SNX6-210ENST00000557341 UBBP0CG47 229 aa11.13□□□□□ -0.63
SNX6-210ENST00000557341 VDAC1P21796 283 aa11.13□□□□□ -0.63
SNX6-210ENST00000557341 SOX6P35712 828 aa11.13□□□□□ -0.63
SNX6-210ENST00000557341 FOXE3Q13461 319 aa11.13□□□□□ -0.63
SNX6-210ENST00000557341 GNMTQ14749 295 aa11.13□□□□□ -0.63
SNX6-210ENST00000557341 MORN2Q502X0 79 aa11.13□□□□□ -0.63
SNX6-210ENST00000557341 NKAPLQ5M9Q1 402 aa11.13□□□□□ -0.63
SNX6-210ENST00000557341 OR8U1Q8NH10 309 aa11.13□□□□□ -0.63
SNX6-210ENST00000557341 MRPL30Q8TCC3 161 aaKnown RBP11.13□□□□□ -0.63
SNX6-210ENST00000557341 HSPB9Q9BQS6 159 aa11.13□□□□□ -0.63
SNX6-210ENST00000557341 FKBP14Q9NWM8 211 aa11.13□□□□□ -0.63
SNX6-210ENST00000557341 CCL24O00175 119 aa11.12□□□□□ -0.63
SNX6-210ENST00000557341 RGS11O94810 467 aa11.12□□□□□ -0.63
SNX6-210ENST00000557341 ELANEP08246 267 aa11.12□□□□□ -0.63
SNX6-210ENST00000557341 F2RL1P55085 397 aa11.12□□□□□ -0.63
SNX6-210ENST00000557341 GP2P55259 537 aaKnown RBP11.12□□□□□ -0.63
SNX6-210ENST00000557341 RAB25P57735 213 aa11.12□□□□□ -0.63
SNX6-210ENST00000557341 HTD2P86397 168 aa11.12□□□□□ -0.63
SNX6-210ENST00000557341 GABPB1Q06547 395 aaPredicted RBP11.12□□□□□ -0.63
SNX6-210ENST00000557341 DCTN2Q13561 401 aaKnown RBP11.12□□□□□ -0.63
SNX6-210ENST00000557341 MMDQ15546 238 aa11.12□□□□□ -0.63
SNX6-210ENST00000557341 DEFB121Q5J5C9 76 aa11.12□□□□□ -0.63
SNX6-210ENST00000557341 RBM48Q5RL73 367 aaKnown RBP11.12□□□□□ -0.63
SNX6-210ENST00000557341 C6orf141Q5SZD1 244 aa11.12□□□□□ -0.63
SNX6-210ENST00000557341 MS4A15Q8N5U1 240 aa11.12□□□□□ -0.63
SNX6-210ENST00000557341 RNF152Q8N8N0 203 aa11.12□□□□□ -0.63
SNX6-210ENST00000557341 RAX2Q96IS3 184 aa11.12□□□□□ -0.63
SNX6-210ENST00000557341 DUX3Q96PT4 197 aa11.12□□□□□ -0.63
SNX6-210ENST00000557341 NEDD4LQ96PU5 975 aa11.12□□□□□ -0.63
SNX6-210ENST00000557341 TMEM59Q9BXS4 323 aa11.12□□□□□ -0.63
SNX6-210ENST00000557341 DCLRE1BQ9H816 532 aa11.12□□□□□ -0.63
SNX6-210ENST00000557341 ZMAT5Q9UDW3 170 aaKnown RBP11.12□□□□□ -0.63
SNX6-210ENST00000557341 ZNF107Q9UII5 783 aaPredicted RBP11.12□□□□□ -0.63
SNX6-210ENST00000557341 ZNF580Q9UK33 172 aa11.12□□□□□ -0.63
SNX6-210ENST00000557341 IGHG4P01861 327 aa11.11□□□□□ -0.63
SNX6-210ENST00000557341 IGF1P05019 195 aa11.11□□□□□ -0.63
SNX6-210ENST00000557341 CDK1P06493 297 aa11.11□□□□□ -0.63
SNX6-210ENST00000557341 OR5H8P0DN80 308 aa11.11□□□□□ -0.63
SNX6-210ENST00000557341 SLC2A2P11168 524 aaPredicted RBP11.11□□□□□ -0.63
SNX6-210ENST00000557341 MYF6P23409 242 aa11.11□□□□□ -0.63
SNX6-210ENST00000557341 CHATP28329 748 aa11.11□□□□□ -0.63
SNX6-210ENST00000557341 PPP1CCP36873 323 aaKnown RBP11.11□□□□□ -0.63
SNX6-210ENST00000557341 CDX1P47902 265 aaPredicted RBP11.11□□□□□ -0.63
SNX6-210ENST00000557341 CFHR3Q02985 330 aa11.11□□□□□ -0.63
SNX6-210ENST00000557341 INSL4Q14641 139 aa11.11□□□□□ -0.63
SNX6-210ENST00000557341 DEFB136Q30KP8 78 aa11.11□□□□□ -0.63
SNX6-210ENST00000557341 ACSM3Q53FZ2 586 aa11.11□□□□□ -0.63
SNX6-210ENST00000557341 FAM27D1Q5T7N8 215 aa11.11□□□□□ -0.63
SNX6-210ENST00000557341 GLT8D1Q68CQ7 371 aa11.11□□□□□ -0.63
SNX6-210ENST00000557341 UNQ9370/PRO34162Q6UXP9 181 aa11.11□□□□□ -0.63
SNX6-210ENST00000557341 LCNL1Q6ZST4 164 aa11.11□□□□□ -0.63
SNX6-210ENST00000557341 OR52L2PQ8NGH6 319 aa11.11□□□□□ -0.63
SNX6-210ENST00000557341 PHYHIPQ92561 330 aa11.11□□□□□ -0.63
SNX6-210ENST00000557341 GALMQ96C23 342 aa11.11□□□□□ -0.63
SNX6-210ENST00000557341 CYYR1Q96J86 154 aa11.11□□□□□ -0.63
SNX6-210ENST00000557341 TMED9Q9BVK6 235 aa11.11□□□□□ -0.63
SNX6-210ENST00000557341 YPEL1O60688 119 aa11.1□□□□□ -0.63
SNX6-210ENST00000557341 VSIG8P0DPA2 414 aa11.1□□□□□ -0.63
SNX6-210ENST00000557341 RPS27AP62979 156 aaKnown RBP11.1□□□□□ -0.63
SNX6-210ENST00000557341 CD69Q07108 199 aa11.1□□□□□ -0.63
SNX6-210ENST00000557341 HMGN3Q15651 99 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms