RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 OGFRL1Q5TC84 451 aaPredicted RBP11.32□□□□□ -0.6
COL2A1-209ENST00000546974 SIGIRRQ6IA17 410 aa11.32□□□□□ -0.6
COL2A1-209ENST00000546974 C18orf65Q6ZTR6 163 aa11.32□□□□□ -0.6
COL2A1-209ENST00000546974 C8orf86Q6ZUL3 223 aa11.32□□□□□ -0.6
COL2A1-209ENST00000546974 ZNF554Q86TJ5 538 aa11.32□□□□□ -0.6
COL2A1-209ENST00000546974 PRR18Q8N4B5 295 aa11.32□□□□□ -0.6
COL2A1-209ENST00000546974 KLHL30-AS1Q8NEE0 82 aa11.32□□□□□ -0.6
COL2A1-209ENST00000546974 BPIFB6Q8NFQ5 453 aa11.32□□□□□ -0.6
COL2A1-209ENST00000546974 OR10V1Q8NGI7 309 aa11.32□□□□□ -0.6
COL2A1-209ENST00000546974 OR1L1Q8NH94 360 aa11.32□□□□□ -0.6
COL2A1-209ENST00000546974 DPF1Q92782 380 aa11.32□□□□□ -0.6
COL2A1-209ENST00000546974 S1PR3Q99500 378 aa11.32□□□□□ -0.6
COL2A1-209ENST00000546974 RASL11BQ9BPW5 248 aa11.32□□□□□ -0.6
COL2A1-209ENST00000546974 MCRIP2Q9BUT9 160 aaKnown RBP11.32□□□□□ -0.6
COL2A1-209ENST00000546974 MBNL3Q9NUK0 354 aaKnown RBP11.32□□□□□ -0.6
COL2A1-209ENST00000546974 FKBP14Q9NWM8 211 aa11.32□□□□□ -0.6
COL2A1-209ENST00000546974 ERGIC3Q9Y282 383 aa11.32□□□□□ -0.6
COL2A1-209ENST00000546974 ZNF736B4DX44 427 aaPredicted RBP11.31□□□□□ -0.6
COL2A1-209ENST00000546974 PDCD6O75340 191 aa11.31□□□□□ -0.6
COL2A1-209ENST00000546974 MORN2Q502X0 79 aa11.31□□□□□ -0.6
COL2A1-209ENST00000546974 RNLSQ5VYX0 342 aa11.31□□□□□ -0.6
COL2A1-209ENST00000546974 UNQ9370/PRO34162Q6UXP9 181 aa11.31□□□□□ -0.6
COL2A1-209ENST00000546974 ZNF695Q8IW36 515 aa11.31□□□□□ -0.6
COL2A1-209ENST00000546974 FAM71E2Q8N5Q1 922 aa11.31□□□□□ -0.6
COL2A1-209ENST00000546974 MS4A15Q8N5U1 240 aa11.31□□□□□ -0.6
COL2A1-209ENST00000546974 P2RX4Q99571 388 aa11.31□□□□□ -0.6
COL2A1-209ENST00000546974 CST11Q9H112 138 aa11.31□□□□□ -0.6
COL2A1-209ENST00000546974 TAF9BQ9HBM6 251 aa11.31□□□□□ -0.6
COL2A1-209ENST00000546974 OR2S2Q9NQN1 319 aa11.31□□□□□ -0.6
COL2A1-209ENST00000546974 KCNIP1Q9NZI2 227 aa11.31□□□□□ -0.6
COL2A1-209ENST00000546974 WI2-2373I1.2A0A1W2PRP0 233 aa11.3□□□□□ -0.6
COL2A1-209ENST00000546974 UBE2QL1A1L167 161 aa11.3□□□□□ -0.6
COL2A1-209ENST00000546974 LANCL1O43813 399 aa11.3□□□□□ -0.6
COL2A1-209ENST00000546974 RRP9O43818 475 aaKnown RBP11.3□□□□□ -0.6
COL2A1-209ENST00000546974 UBBP0CG47 229 aa11.3□□□□□ -0.6
COL2A1-209ENST00000546974 HOXD3P31249 432 aaPredicted RBP11.3□□□□□ -0.6
COL2A1-209ENST00000546974 F2RL1P55085 397 aa11.3□□□□□ -0.6
COL2A1-209ENST00000546974 HTD2P86397 168 aa11.3□□□□□ -0.6
COL2A1-209ENST00000546974 GPR50Q13585 617 aa11.3□□□□□ -0.6
COL2A1-209ENST00000546974 ACSM3Q53FZ2 586 aa11.3□□□□□ -0.6
COL2A1-209ENST00000546974 LY6G6FQ5SQ64 297 aa11.3□□□□□ -0.6
COL2A1-209ENST00000546974 RNF152Q8N8N0 203 aa11.3□□□□□ -0.6
COL2A1-209ENST00000546974 MRPL30Q8TCC3 161 aaKnown RBP11.3□□□□□ -0.6
COL2A1-209ENST00000546974 TFAP2CQ92754 450 aa11.3□□□□□ -0.6
COL2A1-209ENST00000546974 JPT1Q9UK76 154 aa11.3□□□□□ -0.6
COL2A1-209ENST00000546974 H0YHG0 523 aa11.29□□□□□ -0.6
COL2A1-209ENST00000546974 CDK1P06493 297 aa11.29□□□□□ -0.6
COL2A1-209ENST00000546974 ELANEP08246 267 aa11.29□□□□□ -0.6
COL2A1-209ENST00000546974 SOX6P35712 828 aa11.29□□□□□ -0.6
COL2A1-209ENST00000546974 GP2P55259 537 aaKnown RBP11.29□□□□□ -0.6
COL2A1-209ENST00000546974 LSAMPQ13449 338 aa11.29□□□□□ -0.6
COL2A1-209ENST00000546974 FOXE3Q13461 319 aa11.29□□□□□ -0.6
COL2A1-209ENST00000546974 CXorf66Q5JRM2 361 aaPredicted RBP11.29□□□□□ -0.6
COL2A1-209ENST00000546974 C6orf141Q5SZD1 244 aa11.29□□□□□ -0.6
COL2A1-209ENST00000546974 OR52L2PQ8NGH6 319 aa11.29□□□□□ -0.6
COL2A1-209ENST00000546974 PHYHIPQ92561 330 aa11.29□□□□□ -0.6
COL2A1-209ENST00000546974 FAM46BQ96A09 425 aa11.29□□□□□ -0.6
COL2A1-209ENST00000546974 HSPB9Q9BQS6 159 aa11.29□□□□□ -0.6
COL2A1-209ENST00000546974 ABHD14AQ9BUJ0 271 aa11.29□□□□□ -0.6
COL2A1-209ENST00000546974 MND1Q9BWT6 205 aa11.29□□□□□ -0.6
COL2A1-209ENST00000546974 DCLRE1BQ9H816 532 aa11.29□□□□□ -0.6
COL2A1-209ENST00000546974 ZMAT5Q9UDW3 170 aaKnown RBP11.29□□□□□ -0.6
COL2A1-209ENST00000546974 LRRC42Q9Y546 428 aa11.29□□□□□ -0.6
COL2A1-209ENST00000546974 CCL24O00175 119 aa11.28□□□□□ -0.6
COL2A1-209ENST00000546974 YPEL1O60688 119 aa11.28□□□□□ -0.6
COL2A1-209ENST00000546974 IGF1P05019 195 aa11.28□□□□□ -0.6
COL2A1-209ENST00000546974 RPLP1P05386 114 aaKnown RBP11.28□□□□□ -0.6
COL2A1-209ENST00000546974 CDX1P47902 265 aaPredicted RBP11.28□□□□□ -0.6
COL2A1-209ENST00000546974 CFHR3Q02985 330 aa11.28□□□□□ -0.6
COL2A1-209ENST00000546974 INSL4Q14641 139 aa11.28□□□□□ -0.6
COL2A1-209ENST00000546974 KIR2DS1Q14954 304 aa11.28□□□□□ -0.6
COL2A1-209ENST00000546974 DEFB121Q5J5C9 76 aa11.28□□□□□ -0.6
COL2A1-209ENST00000546974 C1orf100Q5SVJ3 147 aa11.28□□□□□ -0.6
COL2A1-209ENST00000546974 GLT8D1Q68CQ7 371 aa11.28□□□□□ -0.6
COL2A1-209ENST00000546974 LRRTM1Q86UE6 522 aa11.28□□□□□ -0.6
COL2A1-209ENST00000546974 RAX2Q96IS3 184 aa11.28□□□□□ -0.6
COL2A1-209ENST00000546974 CYYR1Q96J86 154 aa11.28□□□□□ -0.6
COL2A1-209ENST00000546974 NEDD4LQ96PU5 975 aa11.28□□□□□ -0.6
COL2A1-209ENST00000546974 YPEL2Q96QA6 119 aa11.28□□□□□ -0.6
COL2A1-209ENST00000546974 CHCHD6Q9BRQ6 235 aa11.28□□□□□ -0.6
COL2A1-209ENST00000546974 VCXQ9H320 206 aa11.28□□□□□ -0.6
COL2A1-209ENST00000546974 ZNF580Q9UK33 172 aa11.28□□□□□ -0.6
COL2A1-209ENST00000546974 RGS11O94810 467 aa11.27□□□□□ -0.61
COL2A1-209ENST00000546974 IGHG4P01861 327 aa11.27□□□□□ -0.61
COL2A1-209ENST00000546974 VSIG8P0DPA2 414 aa11.27□□□□□ -0.61
COL2A1-209ENST00000546974 VDAC1P21796 283 aa11.27□□□□□ -0.61
COL2A1-209ENST00000546974 CHATP28329 748 aa11.27□□□□□ -0.61
COL2A1-209ENST00000546974 RPS27AP62979 156 aaKnown RBP11.27□□□□□ -0.61
COL2A1-209ENST00000546974 GNMTQ14749 295 aa11.27□□□□□ -0.61
COL2A1-209ENST00000546974 NKAPLQ5M9Q1 402 aa11.27□□□□□ -0.61
COL2A1-209ENST00000546974 FAM27D1Q5T7N8 215 aa11.27□□□□□ -0.61
COL2A1-209ENST00000546974 C5orf24Q7Z6I8 188 aa11.27□□□□□ -0.61
COL2A1-209ENST00000546974 ODF3L1Q8IXM7 274 aa11.27□□□□□ -0.61
COL2A1-209ENST00000546974 OR8U1Q8NH10 309 aa11.27□□□□□ -0.61
COL2A1-209ENST00000546974 GALMQ96C23 342 aa11.27□□□□□ -0.61
COL2A1-209ENST00000546974 RBMXL1Q96E39 390 aaKnown RBP11.27□□□□□ -0.61
COL2A1-209ENST00000546974 SULT4A1Q9BR01 284 aa11.27□□□□□ -0.61
COL2A1-209ENST00000546974 KMT2CQ8NEZ4 4911 aaKnown RBP11.26□□□□□ -0.61
COL2A1-209ENST00000546974 PTGES3LE9PB15 166 aa11.26□□□□□ -0.61
COL2A1-209ENST00000546974 OR5H8P0DN80 308 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms