RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 CA13Q8N1Q1 262 aa2.89□□□□□ -1.95
SNHG1-217ENST00000541578 PIFOQ8TCI5 191 aa2.89□□□□□ -1.95
SNHG1-217ENST00000541578 RXFP2Q8WXD0 754 aa2.89□□□□□ -1.95
SNHG1-217ENST00000541578 CDS1Q92903 461 aa2.89□□□□□ -1.95
SNHG1-217ENST00000541578 ZNF285Q96NJ3 590 aa2.89□□□□□ -1.95
SNHG1-217ENST00000541578 ZFP3Q96NJ6 502 aa2.89□□□□□ -1.95
SNHG1-217ENST00000541578 PCNX1Q96RV3 2341 aa2.89□□□□□ -1.95
SNHG1-217ENST00000541578 ZNF382Q96SR6 550 aa2.89□□□□□ -1.95
SNHG1-217ENST00000541578 SULT4A1Q9BR01 284 aa2.89□□□□□ -1.95
SNHG1-217ENST00000541578 ZNF251Q9BRH9 671 aa2.89□□□□□ -1.95
SNHG1-217ENST00000541578 KIFC1Q9BW19 673 aa2.89□□□□□ -1.95
SNHG1-217ENST00000541578 METTL9Q9H1A3 318 aa2.89□□□□□ -1.95
SNHG1-217ENST00000541578 ARV1Q9H2C2 271 aa2.89□□□□□ -1.95
SNHG1-217ENST00000541578 OR52A5Q9H2C5 316 aa2.89□□□□□ -1.95
SNHG1-217ENST00000541578 OR51B6Q9H340 312 aa2.89□□□□□ -1.95
SNHG1-217ENST00000541578 NOX3Q9HBY0 568 aa2.89□□□□□ -1.95
SNHG1-217ENST00000541578 TMBIM4Q9HC24 238 aa2.89□□□□□ -1.95
SNHG1-217ENST00000541578 DDX19AQ9NUU7 478 aaKnown RBP2.89□□□□□ -1.95
SNHG1-217ENST00000541578 GLS2Q9UI32 602 aa2.89□□□□□ -1.95
SNHG1-217ENST00000541578 STOML2Q9UJZ1 356 aa2.89□□□□□ -1.95
SNHG1-217ENST00000541578 TP53TG5Q9Y2B4 290 aa2.89□□□□□ -1.95
SNHG1-217ENST00000541578 KLF12Q9Y4X4 402 aa2.89□□□□□ -1.95
SNHG1-217ENST00000541578 ASB4Q9Y574 426 aa2.89□□□□□ -1.95
SNHG1-217ENST00000541578 MN1Q10571 1320 aaPredicted RBP2.89□□□□□ -1.95
SNHG1-217ENST00000541578 A0A0A6YYD5 115 aa2.88□□□□□ -1.95
SNHG1-217ENST00000541578 A0A0B4J2E0 115 aa2.88□□□□□ -1.95
SNHG1-217ENST00000541578 A0A0J9YXV3 536 aa2.88□□□□□ -1.95
SNHG1-217ENST00000541578 FAM92AA1XBS5 289 aa2.88□□□□□ -1.95
SNHG1-217ENST00000541578 GMNCA6NCL1 334 aa2.88□□□□□ -1.95
SNHG1-217ENST00000541578 TCAPO15273 167 aa2.88□□□□□ -1.95
SNHG1-217ENST00000541578 TOX3O15405 576 aaPredicted RBP2.88□□□□□ -1.95
SNHG1-217ENST00000541578 CALUO43852 315 aaPredicted RBP2.88□□□□□ -1.95
SNHG1-217ENST00000541578 CTNSO60931 367 aa2.88□□□□□ -1.95
SNHG1-217ENST00000541578 SPAG7O75391 227 aa2.88□□□□□ -1.95
SNHG1-217ENST00000541578 DCTN3O75935 186 aa2.88□□□□□ -1.95
SNHG1-217ENST00000541578 IGLV2-23P01705 113 aa2.88□□□□□ -1.95
SNHG1-217ENST00000541578 IFNA4P05014 189 aa2.88□□□□□ -1.95
SNHG1-217ENST00000541578 PAEPP09466 180 aa2.88□□□□□ -1.95
SNHG1-217ENST00000541578 THRAP10827 490 aa2.88□□□□□ -1.95
SNHG1-217ENST00000541578 CRABP1P29762 137 aa2.88□□□□□ -1.95
SNHG1-217ENST00000541578 GNRHRP30968 328 aa2.88□□□□□ -1.95
SNHG1-217ENST00000541578 RCVRNP35243 200 aa2.88□□□□□ -1.95
SNHG1-217ENST00000541578 MYCNOSP40205 109 aa2.88□□□□□ -1.95
SNHG1-217ENST00000541578 ACTR1BP42025 376 aa2.88□□□□□ -1.95
SNHG1-217ENST00000541578 CRATP43155 626 aa2.88□□□□□ -1.95
SNHG1-217ENST00000541578 RPL5P46777 297 aaKnown RBP2.88□□□□□ -1.95
SNHG1-217ENST00000541578 PSMB2P49721 201 aa2.88□□□□□ -1.95
SNHG1-217ENST00000541578 ACOT2P49753 483 aa2.88□□□□□ -1.95
SNHG1-217ENST00000541578 CCR6P51684 374 aa2.88□□□□□ -1.95
SNHG1-217ENST00000541578 ZNF136P52737 540 aa2.88□□□□□ -1.95
SNHG1-217ENST00000541578 GTF2BQ00403 316 aa2.88□□□□□ -1.95
SNHG1-217ENST00000541578 IFITM2Q01629 132 aa2.88□□□□□ -1.95
SNHG1-217ENST00000541578 MAD2L1BPQ15013 274 aaPredicted RBP2.88□□□□□ -1.95
SNHG1-217ENST00000541578 CST6Q15828 149 aa2.88□□□□□ -1.95
SNHG1-217ENST00000541578 TMEM255AQ5JRV8 349 aa2.88□□□□□ -1.95
SNHG1-217ENST00000541578 CYB5R2Q6BCY4 276 aa2.88□□□□□ -1.95
SNHG1-217ENST00000541578 FAM92BQ6ZTR7 304 aa2.88□□□□□ -1.95
SNHG1-217ENST00000541578 SMIM15Q7Z3B0 74 aa2.88□□□□□ -1.95
SNHG1-217ENST00000541578 DPPA2Q7Z7J5 298 aa2.88□□□□□ -1.95
SNHG1-217ENST00000541578 NELFCDQ8IXH7 590 aa2.88□□□□□ -1.95
SNHG1-217ENST00000541578 SLC25A45Q8N413 288 aa2.88□□□□□ -1.95
SNHG1-217ENST00000541578 RIBC1Q8N443 379 aaPredicted RBP2.88□□□□□ -1.95
SNHG1-217ENST00000541578 MDS2Q8NDY4 140 aa2.88□□□□□ -1.95
SNHG1-217ENST00000541578 C19orf18Q8NEA5 215 aa2.88□□□□□ -1.95
SNHG1-217ENST00000541578 ZFAND1Q8TCF1 268 aa2.88□□□□□ -1.95
SNHG1-217ENST00000541578 RXFP4Q8TDU9 374 aa2.88□□□□□ -1.95
SNHG1-217ENST00000541578 RNF185Q96GF1 192 aa2.88□□□□□ -1.95
SNHG1-217ENST00000541578 SMARCD1Q96GM5 515 aa2.88□□□□□ -1.95
SNHG1-217ENST00000541578 ADTRPQ96IZ2 230 aa2.88□□□□□ -1.95
SNHG1-217ENST00000541578 ZNF514Q96K75 400 aaPredicted RBP2.88□□□□□ -1.95
SNHG1-217ENST00000541578 RILPQ96NA2 401 aa2.88□□□□□ -1.95
SNHG1-217ENST00000541578 WFIKKN1Q96NZ8 548 aa2.88□□□□□ -1.95
SNHG1-217ENST00000541578 PPP1R2P1Q96PQ5 205 aa2.88□□□□□ -1.95
SNHG1-217ENST00000541578 VAT1Q99536 393 aa2.88□□□□□ -1.95
SNHG1-217ENST00000541578 PKMYT1Q99640 499 aa2.88□□□□□ -1.95
SNHG1-217ENST00000541578 EMC6Q9BV81 110 aa2.88□□□□□ -1.95
SNHG1-217ENST00000541578 IFT46Q9NQC8 304 aa2.88□□□□□ -1.95
SNHG1-217ENST00000541578 OR2S2Q9NQN1 319 aa2.88□□□□□ -1.95
SNHG1-217ENST00000541578 RBAKQ9NYW8 714 aaPredicted RBP2.88□□□□□ -1.95
SNHG1-217ENST00000541578 RPS6KB2Q9UBS0 482 aa2.88□□□□□ -1.95
SNHG1-217ENST00000541578 RSL24D1Q9UHA3 163 aaKnown RBP2.88□□□□□ -1.95
SNHG1-217ENST00000541578 CLEC2DQ9UHP7 191 aa2.88□□□□□ -1.95
SNHG1-217ENST00000541578 SLC22A7Q9Y694 548 aa2.88□□□□□ -1.95
SNHG1-217ENST00000541578 PRRC2AP48634 2157 aaKnown RBP2.88□□□□□ -1.95
SNHG1-217ENST00000541578 DIDO1Q9BTC0 2240 aaKnown RBP2.88□□□□□ -1.95
SNHG1-217ENST00000541578 ZFHX3Q15911 3703 aa2.88□□□□□ -1.95
SNHG1-217ENST00000541578 GTF3C1Q12789 2109 aa2.87□□□□□ -1.95
SNHG1-217ENST00000541578 APCP25054 2843 aa2.87□□□□□ -1.95
SNHG1-217ENST00000541578 IGHV2OR16-5A0A0B4J2B6 119 aa2.87□□□□□ -1.95
SNHG1-217ENST00000541578 IGHV5-51A0A0C4DH38 117 aa2.87□□□□□ -1.95
SNHG1-217ENST00000541578 FAM240AA0A1B0GVK7 77 aa2.87□□□□□ -1.95
SNHG1-217ENST00000541578 ISPDA4D126 451 aa2.87□□□□□ -1.95
SNHG1-217ENST00000541578 SIGLEC16A6NMB1 481 aa2.87□□□□□ -1.95
SNHG1-217ENST00000541578 NDUFC2-KCTD14E9PQ53 114 aa2.87□□□□□ -1.95
SNHG1-217ENST00000541578 K7EN84 100 aa2.87□□□□□ -1.95
SNHG1-217ENST00000541578 ZNF593O00488 134 aaPredicted RBP2.87□□□□□ -1.95
SNHG1-217ENST00000541578 CHST10O43529 356 aa2.87□□□□□ -1.95
SNHG1-217ENST00000541578 SULT1C4O75897 302 aa2.87□□□□□ -1.95
SNHG1-217ENST00000541578 TNFAIP8O95379 198 aa2.87□□□□□ -1.95
SNHG1-217ENST00000541578 S100A8P05109 93 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms